Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J07
(401 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 122 1e-28
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 122 1e-28
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 36 0.011
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 36 0.011
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 35 0.025
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 35 0.025
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 34 0.033
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 34 0.033
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 34 0.033
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 30 0.54
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 30 0.71
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 30 0.71
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 29 0.94
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 29 0.94
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 28 2.2
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 28 2.9
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 28 2.9
AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical ... 27 5.0
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 27 5.0
AF024503-6|AAG24094.1| 388|Caenorhabditis elegans Hypothetical ... 27 5.0
AF016684-10|AAB66205.1| 340|Caenorhabditis elegans Hypothetical... 27 5.0
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 27 5.0
AC024805-7|AAK39344.3| 248|Caenorhabditis elegans Hypothetical ... 27 5.0
AF016432-2|AAB65380.2| 522|Caenorhabditis elegans Hypothetical ... 27 6.7
Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical pr... 26 8.8
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 26 8.8
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ... 26 8.8
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 122 bits (293), Expect = 1e-28
Identities = 55/75 (73%), Positives = 66/75 (88%)
Frame = +3
Query: 177 LARFYANDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVA 356
+ R YA DV+FGA+ R ML GV++LADAV+VTMGPKGRNVI+EQSWGSPKITKDGVTVA
Sbjct: 13 VVRSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVA 72
Query: 357 NGVELKDKFQNIGAK 401
++LKDK+QN+GAK
Sbjct: 73 KSIDLKDKYQNLGAK 87
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 122 bits (293), Expect = 1e-28
Identities = 55/75 (73%), Positives = 66/75 (88%)
Frame = +3
Query: 177 LARFYANDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVA 356
+ R YA DV+FGA+ R ML GV++LADAV+VTMGPKGRNVI+EQSWGSPKITKDGVTVA
Sbjct: 13 VVRSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVA 72
Query: 357 NGVELKDKFQNIGAK 401
++LKDK+QN+GAK
Sbjct: 73 KSIDLKDKYQNLGAK 87
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 35.9 bits (79), Expect = 0.011
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 219 VRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAN 359
VR + +ADAV ++GP+G + +++ G IT DG T+ N
Sbjct: 32 VRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILN 78
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 35.9 bits (79), Expect = 0.011
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 219 VRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAN 359
VR + +ADAV ++GP+G + +++ G IT DG T+ N
Sbjct: 32 VRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILN 78
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 34.7 bits (76), Expect = 0.025
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 234 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTV 353
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 34.7 bits (76), Expect = 0.025
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 234 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTV 353
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 34.3 bits (75), Expect = 0.033
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +3
Query: 174 QLARFYANDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 341
Q+ + A + R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 342 GVTVANGV 365
G T+ +
Sbjct: 64 GATILKSI 71
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 34.3 bits (75), Expect = 0.033
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +3
Query: 174 QLARFYANDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 341
Q+ + A + R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 342 GVTVANGV 365
G T+ +
Sbjct: 64 GATILKSI 71
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 34.3 bits (75), Expect = 0.033
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +3
Query: 174 QLARFYANDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 341
Q+ + A + R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 342 GVTVANGV 365
G T+ +
Sbjct: 64 GATILKSI 71
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 30.3 bits (65), Expect = 0.54
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 376 SFSSTPLATVTPSFVILGEPQDCSRITFLPFGPIVTATASARMST 242
S + P TVTP V E D + +P PIVT T +A ST
Sbjct: 610 SSPTVPTTTVTPEVVREDEDYDYTNEFAIPNEPIVTTTTTAIAST 654
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 29.9 bits (64), Expect = 0.71
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 228 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELKDKFQNIGAK 401
L + G L D + +GPKG +L G K+TKDG + + + ++ ++ AK
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAK 79
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 29.9 bits (64), Expect = 0.71
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 228 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELKDKFQNIGAK 401
L + G L D + +GPKG +L G K+TKDG + + + ++ ++ AK
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAK 79
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 29.5 bits (63), Expect = 0.94
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 210 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELK 374
G +R+ + +A+ V ++GP G + +L G +T DG T+ +E++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVE 72
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 29.5 bits (63), Expect = 0.94
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 210 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELK 374
G +R+ + +A+ V ++GP G + +L G +T DG T+ +E++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVE 72
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 19 EKITLCDPGKNLREIRLDSC*NTVKSFPIYLQIMLRFASLLFVKVLLYTKHTN*RD 186
E LC+ GK + ++ D+C ++ + +Y L FA+L + L H R+
Sbjct: 902 EPFCLCNNGKEIYDVYNDTC-EEIQIWTLYNITFLIFAALTIIGALFVVYHYRNRE 956
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 252 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELK 374
+A+ + ++GP+G + +L G IT DG T+ ++++
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQ 85
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 252 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELK 374
+A+ + ++GP+G + +L G IT DG T+ ++++
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQ 85
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +3
Query: 252 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVANGVELK 374
+A+ + ++GP+G + +L G IT DG T+ ++++
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQ 85
>AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical
protein Y6B3B.3 protein.
Length = 995
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 93 FNSISTRIQPYFSKILTGIAQCDLLADV 10
F S+ +R+QPY I +G DL+ +V
Sbjct: 481 FRSVVSRLQPYLKIIKSGKLPADLITEV 508
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -1
Query: 152 TLTNNSEANRSIICKYMGNDLTVFQQESNLISRRF 48
T N + + + +C + GND+ Q+ N + RF
Sbjct: 309 TYMNAIKEHLAELCNFYGNDMDALQERVNFLRNRF 343
>AF024503-6|AAG24094.1| 388|Caenorhabditis elegans Hypothetical
protein F31F4.17 protein.
Length = 388
Score = 27.1 bits (57), Expect = 5.0
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 88 QYFNKNPTLFLEDSYRDRTM*SSRGCRP 5
+Y N+ P F+E+ Y +R + R P
Sbjct: 109 KYLNRTPVFFIENGYHERMLNKMRSIMP 136
>AF016684-10|AAB66205.1| 340|Caenorhabditis elegans Hypothetical
protein F45C12.6 protein.
Length = 340
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 96 IPHIFTNNASVCLAVVRQSVTLHKTHQLARFY 191
I +F N V R S+T+H++H L R Y
Sbjct: 97 IGKVFDTNFHVMYTSYRYSLTIHRSHCLHRLY 128
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 27.1 bits (57), Expect = 5.0
Identities = 21/55 (38%), Positives = 25/55 (45%)
Frame = +2
Query: 191 CKRCEIRC*CKSPNAAGR*HSSGRGCRHNGSKRQKRDSGAVLGFP*DHKRWSDSR 355
CK C+ C PNA H GR RH S RQK D V+ +KR + R
Sbjct: 177 CKLCD--CKFSDPNAK-EIHIKGR--RHRVSYRQKIDPTLVVDVKPSNKRSQEKR 226
>AC024805-7|AAK39344.3| 248|Caenorhabditis elegans Hypothetical
protein Y51H7C.5 protein.
Length = 248
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 216 DVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDG 344
++ L L G D+L D +T G + + +E W S + +G
Sbjct: 161 NITNLTLHGKDVLTDPTLLTKGLRWTTLGVEYDWNSKEYPPNG 203
>AF016432-2|AAB65380.2| 522|Caenorhabditis elegans Hypothetical
protein C07G3.8 protein.
Length = 522
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 98 SPYIYK*CFGLPRCCSSKCYFTQN 169
+P + + CF C S CYFT +
Sbjct: 146 TPKVIEQCFQAEECTKSNCYFTDS 169
>Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical
protein F40G12.2 protein.
Length = 265
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 54 SRNKVGFLLKYC*IIPHIFTNNASVCL 134
S+N + L+KY + H FT ++ +CL
Sbjct: 235 SKNTIPDLIKYPCFVEHQFTEDSMICL 261
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 238 CSIRALTSAPNLTSFA*NRANWCVLCK 158
CSI +S PNL N ++W V C+
Sbjct: 16 CSIALPSSCPNLCECDQNDSSWSVYCR 42
>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
protein ZC178.2 protein.
Length = 1459
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 283 GPIVTATASARMSTPCSIRALTSAPNLT 200
GP TAT SA TPC+ TS T
Sbjct: 467 GPSSTATNSASSETPCNSETQTSDGTFT 494
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 283 GPIVTATASARMSTPCSIRALTSAPNLT 200
GP TAT SA TPC+ TS T
Sbjct: 733 GPSSTATNSASSETPCNSETQTSDGTFT 760
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 283 GPIVTATASARMSTPCSIRALTSAPNLT 200
GP TAT SA TPC+ TS T
Sbjct: 809 GPSSTATNSASSETPCNSETQTSDGTFT 836
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,714,013
Number of Sequences: 27780
Number of extensions: 199364
Number of successful extensions: 473
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -