Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_J06
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   1.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   1.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.4  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 147 CNYTFTGKEPSTIELEEWEAFLNSN 221
           C +T    EPS I  E+ E  LNS+
Sbjct: 564 CFFTMNDLEPSEIFYEKIETSLNSD 588


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 147 CNYTFTGKEPSTIELEEWEAFLNSN 221
           C +T    EPS I  E+ E  LNS+
Sbjct: 564 CFFTMNDLEPSEIFYEKIETSLNSD 588


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 FPIVFLLFNFYGYSTH 374
           FPIVF  FN   +ST+
Sbjct: 423 FPIVFAFFNLAYWSTY 438


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 FPIVFLLFNFYGYSTH 374
           FPIVF  FN   +ST+
Sbjct: 423 FPIVFAFFNLAYWSTY 438


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 151 IIHLQVKNLQL*NSKNGKHFLT 216
           I+H  VK   +  SKNG+  LT
Sbjct: 176 IVHADVKPKNILMSKNGQPKLT 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,953
Number of Sequences: 438
Number of extensions: 2569
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)