Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_J05
         (520 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    25   0.47 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   5.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.6  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +3

Query: 405 TTPLERKS*TWSSNAFAKLADQCTGLQGFLIFHSF 509
           TT LER S +WSS       DQ    Q +L  HSF
Sbjct: 353 TTGLER-SRSWSSLDNTNTNDQDYSSQNYLTVHSF 386


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -2

Query: 513 HRTSGR*GIPGGLCIGQRVLRMRSRTKSTIS 421
           H   G  G+ G L +G+R+LR+ +  +++I+
Sbjct: 206 HVVGGLTGLIGCLTLGRRILRLDAIDEASIA 236


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 480 LQGFLIFHSFGGG 518
           L+G +I HS+GGG
Sbjct: 656 LRGSIIDHSYGGG 668


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 480 LQGFLIFHSFGGG 518
           L+G +I HS+GGG
Sbjct: 694 LRGSIIDHSYGGG 706


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 248 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 343
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 503 VEDEESLEACALVSEFCECVRG 438
           VED +S+E C  +     C  G
Sbjct: 193 VEDVDSVECCGALKNIVACGAG 214


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 149 PSRHFRSGLR 120
           P RH+RSGL+
Sbjct: 139 PLRHYRSGLK 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,314
Number of Sequences: 438
Number of extensions: 4172
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14477538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)