Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J04
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 250 6e-67
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.5
Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 29 2.5
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 28 5.8
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 28 5.8
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 28 5.8
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 28 5.8
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 28 5.8
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 28 5.8
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 28 5.8
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 5.8
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 5.8
AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical ... 27 7.7
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 250 bits (612), Expect = 6e-67
Identities = 110/165 (66%), Positives = 140/165 (84%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RGH+ +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
+RKA++ HL NP+LEKLLPHI NVGFVFT+ DL ++R KLLEN+ APA+ GAIAP
Sbjct: 61 IRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 582
V +P NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GD
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGD 165
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 54.4 bits (125), Expect = 6e-08
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Frame = +1
Query: 82 SKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKN 261
+K+ ++ K T K+N ++ +D+Y FI N+ S + IR + +S GKN
Sbjct: 13 TKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKN 71
Query: 262 TMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 435
++ A+ A L K +KG G +FT +V + E + AR G +
Sbjct: 72 NVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDV 131
Query: 436 APLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 582
A +VV+P + + L +PTK+ KG I + + K G+
Sbjct: 132 ATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGE 181
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 166 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKG 339
C G D + GS + + R + GH+ +L + + ++DH+++ ++K+ +
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKVYNCLCC 240
Query: 340 NVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 450
N F+ + L+ L+ + RPG + PL++
Sbjct: 241 NWTFL-NQVHLIS-HKTCLKQTGKPCCRPGHMEPLAI 275
>Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical
protein C06B3.10 protein.
Length = 341
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -1
Query: 402 VLQQFITHI-NKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHNAVTTQ 226
++ F+ HI + IS NIS++ Q I LD P+ + NA+ TQ
Sbjct: 254 IIPVFLMHIPSTISMCAAFTNISIEFISQILSCTISLYPALDPLPNFFIIKSYRNAI-TQ 312
Query: 225 *NTDLLHLL 199
TD L LL
Sbjct: 313 YLTDFLRLL 321
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 166 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKG 339
C G D + GS + + R + GH+ +L + + ++DH+++ ++K+ +
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKVYNCLCC 240
Query: 340 NVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 450
N F+ + L+ L+ + RPG + PL++
Sbjct: 241 NWTFL-NQVHLIS-HKTCLKQTGKPCCRPGHMEPLAI 275
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 254 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 289
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 237 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 338
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical
protein T23G5.1 protein.
Length = 788
Score = 27.9 bits (59), Expect = 5.8
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 5/158 (3%)
Frame = +1
Query: 106 ATWKSNYFVKIIQLLDEYP---KCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 276
A W + F+K ++ E+ C G D+ ++ + + V + T+ +
Sbjct: 337 ALWIPDLFMKRVEKDQEWSLMCPCECPGLDDCWGEEFEALYAKYEAEGRV---RKTVKAR 393
Query: 277 AIKDHLETNPALEKLLPHI--KGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 450
+ +H+ +N +E LP+I K + +L ++ L ++ + P IA ++
Sbjct: 394 KLWEHIVSNQ-IETGLPYITYKDAANRKSNQQNLGTIKCSNLCTEIIEYSAPDEIAVCNL 452
Query: 451 VIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVH 564
A N + PEK F L+ TK+ + I DV+
Sbjct: 453 ASIALNRYVTPEKKFDFVKLAEVTKVITRNLNKIIDVN 490
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 391 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 540
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 452 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPT 342
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical
protein Y67A10A.1 protein.
Length = 644
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -1
Query: 405 FVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPH-HGVFAH--EHNAV 235
F++ +++ +I +DK ++ +E ++ +LD FP H F + H AV
Sbjct: 494 FIVARYMNNIKNPVQKDDKIVQQINETIAHYEKYVKKLYILDAFPEFHENFLNLFLHYAV 553
Query: 234 TTQ*NTDLLHL 202
T + D LHL
Sbjct: 554 TRPDDMDALHL 564
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 561 DIIDNFNSTL*NLSGDGKSLEERSLLRTKA-SVMSGNDDRQWSN 433
D + F+ ++ +L G+G L ERSL TKA +M +W N
Sbjct: 457 DTVSLFSPSILSLHGEGTDL-ERSLSLTKALRLMEDTGQEEWMN 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,206,776
Number of Sequences: 27780
Number of extensions: 336506
Number of successful extensions: 940
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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