Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J03
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 278 9e-75
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 276 5e-74
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 276 5e-74
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 276 5e-74
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 276 5e-74
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 276 5e-74
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 274 2e-73
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 194 2e-49
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 162 7e-40
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 53 7e-07
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 31 4.1
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 31 4.1
L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein. 30 5.4
L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein. 30 5.4
L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein. 30 5.4
BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein. 30 5.4
AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein. 30 5.4
AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein. 30 5.4
BC150245-1|AAI50246.1| 1379|Homo sapiens KIAA0774 protein. 30 7.1
AL607144-1|CAI40565.1| 1163|Homo sapiens KIAA0774 protein. 30 7.1
AL596114-1|CAI39910.1| 1163|Homo sapiens KIAA0774 protein. 30 7.1
AL596092-1|CAI40386.1| 1163|Homo sapiens KIAA0774 protein. 30 7.1
AL160255-1|CAI41204.1| 1163|Homo sapiens KIAA0774 protein. 30 7.1
AB018317-1|BAA34494.2| 1381|Homo sapiens KIAA0774 protein protein. 30 7.1
BC050279-1|AAH50279.2| 851|Homo sapiens dynamin 1 protein. 29 9.4
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 278 bits (682), Expect = 9e-75
Identities = 126/185 (68%), Positives = 146/185 (78%)
Frame = +1
Query: 46 IF*KMGFVXXXXXXXXXXXGYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRL 225
+F +MGFV YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR+
Sbjct: 4 LFRRMGFVKVVKNKAYFKR-YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRV 62
Query: 226 SNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXX 405
+N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 63 TNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGM 122
Query: 406 DSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 585
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PH
Sbjct: 123 DKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 182
Query: 586 SIKRF 600
S KRF
Sbjct: 183 STKRF 187
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 276 bits (676), Expect = 5e-74
Identities = 121/165 (73%), Positives = 139/165 (84%)
Frame = +1
Query: 106 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 285
YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IV
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIV 75
Query: 286 CAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPV 465
CAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTGDEYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 466 DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 600
D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 136 DGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 276 bits (676), Expect = 5e-74
Identities = 121/165 (73%), Positives = 139/165 (84%)
Frame = +1
Query: 106 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 285
YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IV
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIV 75
Query: 286 CAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPV 465
CAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTGDEYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 466 DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 600
D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 136 DGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 276 bits (676), Expect = 5e-74
Identities = 121/165 (73%), Positives = 139/165 (84%)
Frame = +1
Query: 106 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 285
YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IV
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIV 75
Query: 286 CAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPV 465
CAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTGDEYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 466 DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 600
D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 136 DGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 276 bits (676), Expect = 5e-74
Identities = 121/165 (73%), Positives = 139/165 (84%)
Frame = +1
Query: 106 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 285
YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IV
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIV 75
Query: 286 CAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPV 465
CAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTGDEYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 466 DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 600
D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 136 DGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 276 bits (676), Expect = 5e-74
Identities = 121/165 (73%), Positives = 139/165 (84%)
Frame = +1
Query: 106 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 285
YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IV
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIV 75
Query: 286 CAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPV 465
CAAY+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTGDEYNVE +
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 466 DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 600
D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 136 DGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 274 bits (671), Expect = 2e-73
Identities = 120/165 (72%), Positives = 138/165 (83%)
Frame = +1
Query: 106 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 285
YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IV
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIV 75
Query: 286 CAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPV 465
CA Y+HELP+YG+KVGLTNYAAAYCTG D +Y G EVTGDEYNVE +
Sbjct: 76 CARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESI 135
Query: 466 DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 600
D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 136 DGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 194 bits (473), Expect = 2e-49
Identities = 84/125 (67%), Positives = 100/125 (80%)
Frame = +1
Query: 211 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 390
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 391 XXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 570
D +Y G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 571 LNVPH 585
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 162 bits (394), Expect = 7e-40
Identities = 69/83 (83%), Positives = 81/83 (97%)
Frame = +1
Query: 106 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 285
YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IV
Sbjct: 16 YQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIV 75
Query: 286 CAAYSHELPRYGIKVGLTNYAAA 354
CAAY+HELP+YG+KVGLTNYAAA
Sbjct: 76 CAAYAHELPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 53.2 bits (122), Expect = 7e-07
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 517 TTTGARVFGAMKGAVDGGLNVPHSIKRF 600
TTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRF 28
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 578 TFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 438
T +PP ++P R+ + +A P H+ P PL +TL+ +P
Sbjct: 561 TIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTP 607
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 578 TFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSP 438
T +PP ++P R+ + +A P H+ P PL +TL+ +P
Sbjct: 561 TIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHPATLFGTP 607
>L07810-1|AAA02806.1| 126|Homo sapiens dynamin protein.
Length = 126
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -3
Query: 572 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 420
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 94
>L07809-1|AAA02805.1| 131|Homo sapiens dynamin protein.
Length = 131
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -3
Query: 572 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 420
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 48 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 94
>L07807-1|AAA02803.1| 864|Homo sapiens dynamin protein.
Length = 864
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -3
Query: 572 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 420
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>BC063850-1|AAH63850.1| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -3
Query: 572 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 420
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>AL590708-18|CAI13837.1| 864|Homo sapiens dynamin 1 protein.
Length = 864
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -3
Query: 572 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 420
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>AL590708-17|CAI13839.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -3
Query: 572 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 420
+ P+++P P RAP V A+P S+ APGP GS L +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSALGGAPPVPSRP 819
>BC150245-1|AAI50246.1| 1379|Homo sapiens KIAA0774 protein.
Length = 1379
Score = 29.9 bits (64), Expect = 7.1
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -3
Query: 542 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 441
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 789 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 822
>AL607144-1|CAI40565.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 7.1
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -3
Query: 542 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 441
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL596114-1|CAI39910.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 7.1
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -3
Query: 542 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 441
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL596092-1|CAI40386.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 7.1
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -3
Query: 542 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 441
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AL160255-1|CAI41204.1| 1163|Homo sapiens KIAA0774 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 7.1
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -3
Query: 542 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 441
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607
>AB018317-1|BAA34494.2| 1381|Homo sapiens KIAA0774 protein protein.
Length = 1381
Score = 29.9 bits (64), Expect = 7.1
Identities = 10/34 (29%), Positives = 25/34 (73%)
Frame = -3
Query: 542 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 441
P+ ++ +++ ++ +S ++ PGP++T ++LYSS
Sbjct: 791 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 824
>BC050279-1|AAH50279.2| 851|Homo sapiens dynamin 1 protein.
Length = 851
Score = 29.5 bits (63), Expect = 9.4
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3
Query: 572 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAP 420
+ P+++P P RAP V A+P S+ APGP GS + +P P
Sbjct: 773 RSPTSSP--TPQRRAPAVPPARPGSR--GPAPGPPPAGSAMGGAPPVPSRP 819
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,692,590
Number of Sequences: 237096
Number of extensions: 1971005
Number of successful extensions: 12725
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12725
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -