Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_J02
(451 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 211 4e-55
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 211 4e-55
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 211 4e-55
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 211 4e-55
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 211 4e-55
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 211 4e-55
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 189 1e-48
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 189 1e-48
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 137 6e-33
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 137 6e-33
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 46 2e-05
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 46 2e-05
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 44 7e-05
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 44 7e-05
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 30 1.7
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 30 1.7
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 28 5.0
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 211 bits (515), Expect = 4e-55
Identities = 93/116 (80%), Positives = 107/116 (92%)
Frame = +2
Query: 104 KHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 283
+HKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KG
Sbjct: 21 EHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKG 80
Query: 284 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPK 451
HSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPK
Sbjct: 81 HSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 39 MKLNVSYPATGCQKLFEVVDE 101
MKLNVSYPATGCQKLFEVVDE
Sbjct: 1 MKLNVSYPATGCQKLFEVVDE 21
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 211 bits (515), Expect = 4e-55
Identities = 93/116 (80%), Positives = 107/116 (92%)
Frame = +2
Query: 104 KHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 283
+HKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KG
Sbjct: 21 EHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKG 80
Query: 284 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPK 451
HSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPK
Sbjct: 81 HSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 39 MKLNVSYPATGCQKLFEVVDE 101
MKLNVSYPATGCQKLFEVVDE
Sbjct: 1 MKLNVSYPATGCQKLFEVVDE 21
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 211 bits (515), Expect = 4e-55
Identities = 93/116 (80%), Positives = 107/116 (92%)
Frame = +2
Query: 104 KHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 283
+HKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KG
Sbjct: 21 EHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKG 80
Query: 284 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPK 451
HSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPK
Sbjct: 81 HSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 39 MKLNVSYPATGCQKLFEVVDE 101
MKLNVSYPATGCQKLFEVVDE
Sbjct: 1 MKLNVSYPATGCQKLFEVVDE 21
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 211 bits (515), Expect = 4e-55
Identities = 93/116 (80%), Positives = 107/116 (92%)
Frame = +2
Query: 104 KHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 283
+HKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KG
Sbjct: 21 EHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKG 80
Query: 284 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPK 451
HSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPK
Sbjct: 81 HSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 39 MKLNVSYPATGCQKLFEVVDE 101
MKLNVSYPATGCQKLFEVVDE
Sbjct: 1 MKLNVSYPATGCQKLFEVVDE 21
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 211 bits (515), Expect = 4e-55
Identities = 93/116 (80%), Positives = 107/116 (92%)
Frame = +2
Query: 104 KHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 283
+HKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KG
Sbjct: 24 EHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKG 83
Query: 284 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPK 451
HSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPK
Sbjct: 84 HSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 139
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 45 LNVSYPATGCQKLFEVVDE 101
LNVSYPATGCQKLFEVVDE
Sbjct: 6 LNVSYPATGCQKLFEVVDE 24
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 211 bits (515), Expect = 4e-55
Identities = 93/116 (80%), Positives = 107/116 (92%)
Frame = +2
Query: 104 KHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 283
+HKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KG
Sbjct: 21 EHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKG 80
Query: 284 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPK 451
HSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPK
Sbjct: 81 HSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 39 MKLNVSYPATGCQKLFEVVDE 101
MKLNVSYPATGCQKLFEVVDE
Sbjct: 1 MKLNVSYPATGCQKLFEVVDE 21
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 189 bits (461), Expect = 1e-48
Identities = 84/105 (80%), Positives = 96/105 (91%)
Frame = +2
Query: 137 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 316
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 317 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPK 451
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPK
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 105
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 189 bits (461), Expect = 1e-48
Identities = 84/105 (80%), Positives = 96/105 (91%)
Frame = +2
Query: 137 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 316
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 317 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPK 451
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPK
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 105
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 137 bits (332), Expect = 6e-33
Identities = 64/96 (66%), Positives = 79/96 (82%)
Frame = +2
Query: 104 KHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 283
+HKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ R+RLL K
Sbjct: 21 EHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL-KKI 79
Query: 284 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 391
HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 80 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 115
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 39 MKLNVSYPATGCQKLFEVVDE 101
MKLNVSYPATGCQKLFEVVDE
Sbjct: 1 MKLNVSYPATGCQKLFEVVDE 21
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 137 bits (332), Expect = 6e-33
Identities = 64/96 (66%), Positives = 79/96 (82%)
Frame = +2
Query: 104 KHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 283
+HKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ R+RLL K
Sbjct: 21 EHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL-KKI 79
Query: 284 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 391
HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 80 HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 115
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 39 MKLNVSYPATGCQKLFEVVDE 101
MKLNVSYPATGCQKLFEVVDE
Sbjct: 1 MKLNVSYPATGCQKLFEVVDE 21
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 251 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 391
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 50
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 251 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 391
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 50
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 257 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 391
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 64
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +2
Query: 257 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRK 391
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKK 62
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 299 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 448
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 299 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 448
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 221 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAWL 99
PA +QH +H L+ R ++ + P HR GA A L
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACL 1075
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,605,246
Number of Sequences: 53049
Number of extensions: 434888
Number of successful extensions: 966
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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