Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_J01
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   172   3e-43
AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   172   3e-43
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   172   3e-43
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    31   0.78 
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    31   0.78 
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    31   0.78 

>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  172 bits (418), Expect = 3e-43
 Identities = 80/92 (86%), Positives = 86/92 (93%)
 Frame = +2

Query: 176 TYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 355
           TYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH 
Sbjct: 50  TYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHC 109

Query: 356 SPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 451
           SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 110 SPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 141



 Score = 27.9 bits (59), Expect = 9.6
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +3

Query: 96  RYHKDVGLGFKTPREAVE 149
           R+++ +GLGF+ P EA++
Sbjct: 31  RFYRQIGLGFRAPAEAID 48


>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  172 bits (418), Expect = 3e-43
 Identities = 80/92 (86%), Positives = 86/92 (93%)
 Frame = +2

Query: 176 TYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 355
           TYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH 
Sbjct: 51  TYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHC 110

Query: 356 SPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 451
           SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 111 SPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142



 Score = 34.7 bits (76), Expect = 0.083
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +3

Query: 93  LRYHKDVGLGFKTPREAVE 149
           LR  +DVGLGFKTPREA++
Sbjct: 31  LRRSRDVGLGFKTPREAID 49


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  172 bits (418), Expect = 3e-43
 Identities = 80/92 (86%), Positives = 86/92 (93%)
 Frame = +2

Query: 176 TYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 355
           TYIDKKCP+TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH 
Sbjct: 51  TYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHC 110

Query: 356 SPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 451
           SP FRDVE GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 111 SPVFRDVEHGDIVTIGECRPLSKTVRFNVLKV 142



 Score = 34.7 bits (76), Expect = 0.083
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +3

Query: 93  LRYHKDVGLGFKTPREAVE 149
           LR  +DVGLGFKTPREA++
Sbjct: 31  LRRSRDVGLGFKTPREAID 49


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 215 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 355
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 215 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 355
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 215 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 355
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,999,810
Number of Sequences: 53049
Number of extensions: 461105
Number of successful extensions: 984
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)