Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_I21
         (421 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   4.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   7.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   9.9  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 398 IVFY*IDMYVFRYLYQKY 345
           IVFY I  YVFR   + Y
Sbjct: 344 IVFYIISRYVFRSALEDY 361


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 252 LRVTFNFRKQLGFRL 208
           +++ FN R++LG+ L
Sbjct: 203 IQIVFNLRRRLGYHL 217


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 205 KTHKNFNKIRFNTQFYGQVL 146
           KT K   K  F TQ+ G+V+
Sbjct: 511 KTMKTIKKGSFVTQYVGEVI 530


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 207 KKLIKISIKFDSIHSFTGKCYNL 139
           ++ IKIS+ + S  +   KC  L
Sbjct: 336 REKIKISVSYPSTETLNTKCNTL 358


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -2

Query: 297 LDRF*RDCCSR*LKLLRVTFNFRKQLGFRLKKL 199
           LDRF  D  S     L   FNFR      +KKL
Sbjct: 210 LDRFHNDKYSNVPYFLFGDFNFRTDTAGVIKKL 242


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 243 LPGVTSAIYYNSP 281
           L  VT  +YYNSP
Sbjct: 257 LSPVTHNLYYNSP 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,593
Number of Sequences: 438
Number of extensions: 2205
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)