Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_I20
         (566 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    28   0.075
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    23   2.8  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   2.8  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   3.7  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    22   3.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   6.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   6.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.6  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 0.075
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = +2

Query: 329 VVMHDPFAMRPFFGY--NFGEYLKHWLSMPQPGRNMPKIFHVNWFRKDDPG*FLWPG--Y 496
           ++M+  F +  + G   N  EYL H  +    GRN  K      FR D    +L PG  +
Sbjct: 413 IIMYIAFIILQYAGLLRNRSEYLNHLRANVAEGRNQRKNVLDRLFRMDRDAVYLQPGMSF 472

Query: 497 GE 502
           GE
Sbjct: 473 GE 474


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 11  DGGVWWEGM 37
           DGG++WEG+
Sbjct: 99  DGGIFWEGL 107


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +3

Query: 318 TVVKLLCTIHLPCVHSLDTTLASTLNIGSRCRNLDAICPKSS 443
           T+V LLC I+   VH+    +  +   G    +L ++   +S
Sbjct: 4   TIVSLLCVIYCALVHADTVAILCSQKAGFDLSDLKSMYESNS 45


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 170 ESSEGVPISAILLGGRRPAGVPLVVESRDW 259
           E + GVP S  ++  ++  G PL+    DW
Sbjct: 87  ERNNGVPSSLNVVTNKKGKGGPLLRPYPDW 116


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 318 TVVKLLCTIHLPCVHS 365
           T+V LLC I+   VH+
Sbjct: 4   TIVSLLCVIYCALVHA 19


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 5   EGDGGVWWEGMG 40
           E DG V WEG G
Sbjct: 260 EKDGQVLWEGFG 271


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 5   EGDGGVWWEGMG 40
           E DG V WEG G
Sbjct: 260 EKDGQVLWEGFG 271


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 114 QTQDSAHPLTNVR 152
           QT+D+  PL+NVR
Sbjct: 593 QTEDNFGPLSNVR 605


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,600
Number of Sequences: 438
Number of extensions: 5171
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)