Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_I08
(498 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 89 3e-19
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 64 1e-11
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 63 3e-11
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 61 8e-11
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 60 2e-10
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 54 1e-08
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 43 2e-05
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 33 0.018
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 28 0.90
SPCC16A11.05c |dim1||U4/U6 x U5 tri-snRNP complex subunit Dim1|S... 27 1.2
SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1 |Sc... 27 1.2
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 26 2.7
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 25 4.8
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 25 4.8
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 25 8.4
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 25 8.4
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 89.4 bits (212), Expect = 3e-19
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = +1
Query: 91 DKLVVIDFMATWCGTCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFV 270
DKLVV+DF ATWCG CK I PK ++ +N SD+ +KVDVD+ +IAAE ++AMP+F
Sbjct: 18 DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDA-TFIKVDVDQLSEIAAEAGVHAMPSFF 76
Query: 271 FVKATKKLEEFSGAN 315
K +K+EE GAN
Sbjct: 77 LYKNGEKIEEIVGAN 91
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 64.1 bits (149), Expect = 1e-11
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 VVIDFMATWCGTCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAEYNINAMPTFVFV 276
+ +D A WCG CK I P ++A++ S V KV+VDE IA+ + AMPTFVF
Sbjct: 22 LAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFF 81
Query: 277 KATKKLEEFSGAN 315
+ K+++ +GAN
Sbjct: 82 ENGKQIDMLTGAN 94
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 62.9 bits (146), Expect = 3e-11
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 91 DKLVVIDFMATWCGTCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAEYNINAMPTF 267
DK++++ F A WCG CK + P+ + A+E+ D I +++VD E D+ +EY+I PT
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 268 VFVKATKKLEEFSG 309
K K++ ++SG
Sbjct: 99 NVFKNGKQISQYSG 112
Score = 54.8 bits (126), Expect = 7e-09
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +1
Query: 94 KLVVIDFMATWCGTCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAMPTF 267
K V+++F A WCG CK + P +++A E SD ++VV K+D E DI+ +I+ PT
Sbjct: 374 KDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATE-NDISV--SISGFPTI 430
Query: 268 VFVKATKKL 294
+F KA K+
Sbjct: 431 MFFKANDKV 439
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 61.3 bits (142), Expect = 8e-11
Identities = 27/78 (34%), Positives = 47/78 (60%)
Frame = +1
Query: 85 AGDKLVVIDFMATWCGTCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPT 264
+ DK+ V+DF A WCG CK + P L+++ +E + + V+ D+ DIA + + A+PT
Sbjct: 33 SADKVTVVDFYADWCGPCKYLKPFLEKL-SEQNQKASFIAVNADKFSDIAQKNGVYALPT 91
Query: 265 FVFVKATKKLEEFSGANV 318
V + ++L+ GA+V
Sbjct: 92 MVLFRKGQELDRIVGADV 109
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 60.1 bits (139), Expect = 2e-10
Identities = 24/75 (32%), Positives = 45/75 (60%)
Frame = +1
Query: 91 DKLVVIDFMATWCGTCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFV 270
+++++++F A W CK + D+ A + ++ V LK++ ++ DIA +++NA+P FV
Sbjct: 20 EQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNA-VFLKIEAEKFSDIAESFDVNAVPLFV 78
Query: 271 FVKATKKLEEFSGAN 315
+ K L SGAN
Sbjct: 79 LIHGAKVLARISGAN 93
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 54.0 bits (124), Expect = 1e-08
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 85 AGDKLVVIDFMATWCGTCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAM 258
A K +I+F ATWCG CK + P +E+ D +++ K+D D D+A +Y+I
Sbjct: 37 ASKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGF 96
Query: 259 PTFVF 273
PT ++
Sbjct: 97 PTLIW 101
Score = 41.9 bits (94), Expect = 5e-05
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 94 KLVVIDFMATWCGTCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAMPTF 267
K V+++F A WCG CK + P + + + ++ ++K++ D DI + + + PT
Sbjct: 159 KDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTI 218
Query: 268 VF 273
F
Sbjct: 219 KF 220
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 43.2 bits (97), Expect = 2e-05
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 88 GDKLVVIDFMATWCGTCKMIGPKLDEMANEMSDSIVVLKVDVDECED--IAAEYNINAMP 261
G LVV F A WCG CK + P ++A+ + + V VD D ++ + ++Y + P
Sbjct: 49 GPSLVV--FYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFP 106
Query: 262 TFVFVKATKKLEEFSGAN 315
T V + K S +
Sbjct: 107 TIKLVYPSSKGSSLSSTD 124
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 33.5 bits (73), Expect = 0.018
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 79 SEAGDKLVVIDFMATWCGTCKMIGPKLDEMANEMSDSIVVLKV---DVDECEDIAAEYNI 249
SE I + CG CK +GP D M + + + +VD +++++ NI
Sbjct: 38 SEVSKGTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSKELSSCANI 97
Query: 250 NAMPTFVFVKATKKLEE 300
A+PT + + +EE
Sbjct: 98 RAVPTLYLYQNGEIVEE 114
Score = 32.3 bits (70), Expect = 0.042
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 106 IDFMATWCGTCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 279
I F ++ C C + MAN M + V ++ + +Y+I PTF+F K
Sbjct: 303 IQFYSSECDDCDDVSTAWYAMANRMRGKLNVAHINCAVSKRACKQYSIQYFPTFLFFK 360
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 27.9 bits (59), Expect = 0.90
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 350 FNFKMVFLSLSTFAPENSSSFLVALTNTK 264
F +K ++ SLS F ENS ++ L TK
Sbjct: 1157 FPYKPIYFSLSDFLKENSDEIILVLILTK 1185
>SPCC16A11.05c |dim1||U4/U6 x U5 tri-snRNP complex subunit
Dim1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 142
Score = 27.5 bits (58), Expect = 1.2
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 91 DKLVVIDFMATWCGTCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFV 270
++LVVI F C L +A ++ + V+ VD+DE D Y + T +
Sbjct: 23 ERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYLVDIDEVPDFNKMYELYDRTTIM 82
Query: 271 FVKATKKL 294
F K +
Sbjct: 83 FFYRNKHM 90
>SPBC31E1.02c |pmr1||P-type ATPase, calcium transporting Pmr1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 899
Score = 27.5 bits (58), Expect = 1.2
Identities = 18/83 (21%), Positives = 39/83 (46%)
Frame = -1
Query: 402 IINALFXSVHIIAETGLFQFQDGVLEFVDVRAGELFEFLGRLNKHESRHRVDVIFGGDVF 223
I+ AL ++A TG DGV + ++ ++ +GR ++ D+I D F
Sbjct: 611 IVEALQSLGDVVAMTG-----DGVNDAPALKLADIGIAMGRQGTDVAKEAADMILTDDSF 665
Query: 222 AFVNVDLKNNNGVGHFVRHLVEF 154
A + ++ G+ + +++ + F
Sbjct: 666 ATILSAVEEGKGIFNNIKNFITF 688
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 26.2 bits (55), Expect = 2.7
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -2
Query: 179 ISFAISSSLGPIILQVPHQVAMK--SITTSLSPASDQHGLQVIEVIDVD 39
+ ++ S+ PI +++ Q K SI L+ + QH ++ + D+D
Sbjct: 164 VPYSCFSNQQPIYIEIASQAIFKDRSINFELAISQSQHSIRAMSAADID 212
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 333 VLEFVDVRAGELFEFLGRLNKHESRHRVDVIF 238
VLEF++ +L + G+LN++ + V IF
Sbjct: 77 VLEFLESLIQDLTHYFGKLNENTVKDNVSFIF 108
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 25.4 bits (53), Expect = 4.8
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -1
Query: 204 LKNNNGVGHFVRHLVEFGPDHLAGAAPSRHEVNHDELVARLRPAWSSSHRSH*CGSTFCT 25
++N + G R E P L+ PS+ + N D R RP +SSS GS+ T
Sbjct: 454 IRNIDPFGGLSRLGREEYPRRLSNPPPSQ-KTNQDAWTNRKRPGYSSSFD----GSSQST 508
Query: 24 FK*ENN 7
F NN
Sbjct: 509 FNPSNN 514
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 24.6 bits (51), Expect = 8.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 214 DECEDIAAEYNINAMPTFVFVKATKKL 294
D+CE+ AE+ F+F+K ++L
Sbjct: 518 DQCEEFVAEFRQTEEKYFLFLKRLREL 544
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 79 SEAGDKLVVI---DFMATWCGTCKMIGPKLDEMANEMSDSIVVL 201
+EAG I D ++ W G + + +L EMA E SI+ +
Sbjct: 184 TEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFI 227
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,812,747
Number of Sequences: 5004
Number of extensions: 32635
Number of successful extensions: 133
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 196153982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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