Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_I04
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 172 7e-43
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 172 7e-43
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 172 7e-43
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 172 7e-43
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 172 7e-43
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 169 6e-42
AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13 p... 58 2e-08
BC117459-1|AAI17460.1| 369|Homo sapiens transmembrane protein 1... 31 3.0
BC117457-1|AAI17458.1| 369|Homo sapiens transmembrane protein 1... 31 3.0
AK098526-1|BAC05322.1| 369|Homo sapiens protein ( Homo sapiens ... 31 3.0
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQTNVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 172 bits (419), Expect = 7e-43
Identities = 79/123 (64%), Positives = 92/123 (74%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRCPTVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 169 bits (411), Expect = 6e-42
Identities = 78/123 (63%), Positives = 91/123 (73%)
Frame = +1
Query: 31 NNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRCPTVR 210
N M+ HFHKDWQR V TWFNQPAR+ RR++ R +RP+VRC TVR
Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVR 65
Query: 211 YHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQRLKEYRASLI 390
YHTKVRAGRGF+L E+R +G++ ARTIGI+VDPRRRNKS ESLQ NVQRLKEYR+ LI
Sbjct: 66 YHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLI 125
Query: 391 LFP 399
LFP
Sbjct: 126 LFP 128
Score = 68.5 bits (160), Expect = 2e-11
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +3
Query: 393 FP*RARKVLKGEANEEERKLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGAR 572
FP + KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR
Sbjct: 127 FPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMAR 186
Query: 573 SIAKL 587
+ A+L
Sbjct: 187 ANARL 191
>AB007172-1|BAA25832.1| 65|Homo sapiens ribosomal protein L13
protein.
Length = 65
Score = 58.0 bits (134), Expect = 2e-08
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +3
Query: 447 KLATQLRGPLMPVQQTAPKSVARPITEDEKNFKAYQYLRGARSIAKL 587
KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L
Sbjct: 2 KLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARL 48
>BC117459-1|AAI17460.1| 369|Homo sapiens transmembrane protein 162
protein.
Length = 369
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 413 LSCPSGKRIREALYSFNL*TLICNDS 336
+SCPSGK+ ++AL S N L CN S
Sbjct: 22 ISCPSGKQCQQALLSGNDILLYCNSS 47
>BC117457-1|AAI17458.1| 369|Homo sapiens transmembrane protein 162
protein.
Length = 369
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 413 LSCPSGKRIREALYSFNL*TLICNDS 336
+SCPSGK+ ++AL S N L CN S
Sbjct: 22 ISCPSGKQCQQALLSGNDILLYCNSS 47
>AK098526-1|BAC05322.1| 369|Homo sapiens protein ( Homo sapiens
cDNA FLJ25660 fis, clone TST00449. ).
Length = 369
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 413 LSCPSGKRIREALYSFNL*TLICNDS 336
+SCPSGK+ ++AL S N L CN S
Sbjct: 22 ISCPSGKQCQQALLSGNDILLYCNSS 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,284,368
Number of Sequences: 237096
Number of extensions: 1523472
Number of successful extensions: 10181
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10181
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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