Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_I03
(473 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24 pro... 184 1e-46
U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24 pro... 184 1e-46
M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24 pro... 184 1e-46
BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24 p... 184 1e-46
BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24 p... 184 1e-46
AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24 p... 184 1e-46
AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24 p... 184 1e-46
BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein pr... 182 4e-46
BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein. 35 0.17
AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens ... 31 2.7
AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein. 30 3.6
BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein. 30 4.7
AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein. 30 4.7
AK025859-1|BAB15260.1| 460|Homo sapiens protein ( Homo sapiens ... 29 8.2
>U12202-2|AAB08007.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 184 bits (448), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +1
Query: 121 KQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 300
KQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD
Sbjct: 21 KQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLD 80
Query: 301 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 420
AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 81 YAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 69 TATIRTRKFMTNRLL 113
T TIRTRKFMTNRLL
Sbjct: 4 TVTIRTRKFMTNRLL 18
>U12202-1|AAB08006.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 184 bits (448), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +1
Query: 121 KQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 300
KQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD
Sbjct: 21 KQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLD 80
Query: 301 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 420
AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 81 YAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 69 TATIRTRKFMTNRLL 113
T TIRTRKFMTNRLL
Sbjct: 4 TVTIRTRKFMTNRLL 18
>M31520-2|AAA36588.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 184 bits (448), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +1
Query: 121 KQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 300
KQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD
Sbjct: 21 KQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLD 80
Query: 301 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 420
AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 81 YAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 69 TATIRTRKFMTNRLL 113
T TIRTRKFMTNRLL
Sbjct: 4 TVTIRTRKFMTNRLL 18
>BC071926-1|AAH71926.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 184 bits (448), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +1
Query: 121 KQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 300
KQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD
Sbjct: 21 KQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLD 80
Query: 301 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 420
AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 81 YAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 69 TATIRTRKFMTNRLL 113
T TIRTRKFMTNRLL
Sbjct: 4 TVTIRTRKFMTNRLL 18
>BC000523-1|AAH00523.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 184 bits (448), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +1
Query: 121 KQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 300
KQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD
Sbjct: 21 KQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLD 80
Query: 301 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 420
AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 81 YAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 69 TATIRTRKFMTNRLL 113
T TIRTRKFMTNRLL
Sbjct: 4 TVTIRTRKFMTNRLL 18
>AL512628-3|CAI16468.1| 133|Homo sapiens ribosomal protein S24
protein.
Length = 133
Score = 184 bits (448), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +1
Query: 121 KQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 300
KQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD
Sbjct: 21 KQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLD 80
Query: 301 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 420
AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 81 YAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 69 TATIRTRKFMTNRLL 113
T TIRTRKFMTNRLL
Sbjct: 4 TVTIRTRKFMTNRLL 18
>AL512628-2|CAI16467.1| 130|Homo sapiens ribosomal protein S24
protein.
Length = 130
Score = 184 bits (448), Expect = 1e-46
Identities = 84/100 (84%), Positives = 92/100 (92%)
Frame = +1
Query: 121 KQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 300
KQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD
Sbjct: 21 KQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLD 80
Query: 301 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 420
AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 81 YAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 69 TATIRTRKFMTNRLL 113
T TIRTRKFMTNRLL
Sbjct: 4 TVTIRTRKFMTNRLL 18
>BX537975-1|CAD97939.1| 132|Homo sapiens hypothetical protein
protein.
Length = 132
Score = 182 bits (444), Expect = 4e-46
Identities = 83/100 (83%), Positives = 92/100 (92%)
Frame = +1
Query: 121 KQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLD 300
KQMV DVLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+FGGGK+TGF +IYD+LD
Sbjct: 21 KQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKTTGFGMIYDSLD 80
Query: 301 LAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 420
AKK EPKHRLARHGLYEKK+ +R+QRKERKNRMKKVRGT
Sbjct: 81 YAKKNEPKHRLARHGLYEKKKTSREQRKERKNRMKKVRGT 120
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 69 TATIRTRKFMTNRLL 113
T TIRTRKFMTNRLL
Sbjct: 4 TVTIRTRKFMTNRLL 18
>BC004173-1|AAH04173.1| 1500|Homo sapiens ANKRD17 protein protein.
Length = 1500
Score = 34.7 bits (76), Expect = 0.17
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 408
+++ + LDL K E RLA EKK+ +K++K++K + KK
Sbjct: 1457 SILLEELDLEKLREESRRLALAAKREKKKKKKKKKKKKKKKKKK 1500
>AK000295-1|BAA91063.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ20288 fis, clone HEP04414. ).
Length = 686
Score = 30.7 bits (66), Expect = 2.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 408
+++ LDL K E + A EK++ RK++K++K + KK
Sbjct: 640 SILLKELDLEKSREESRKQALAAKREKRKEKRKKKKKKKKKKKK 683
>AB014597-1|BAA31672.2| 2486|Homo sapiens KIAA0697 protein protein.
Length = 2486
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 399
+++ + LDL K E RLA EK++ R+++KE + R
Sbjct: 1340 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKEEQRR 1380
>BC130280-1|AAI30281.1| 1621|Homo sapiens ABCA8 protein protein.
Length = 1621
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 461 SHHFLTAAPTLDFLVPRTFFILFLRSLRCL 372
S + P L FL+P FI+FL +LRCL
Sbjct: 1191 SEERMDVQPFLVFLIPFLHFIIFLFTLRCL 1220
>AB020629-1|BAA74845.2| 1591|Homo sapiens KIAA0822 protein protein.
Length = 1591
Score = 29.9 bits (64), Expect = 4.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 461 SHHFLTAAPTLDFLVPRTFFILFLRSLRCL 372
S + P L FL+P FI+FL +LRCL
Sbjct: 1161 SEERMDVQPFLVFLIPFLHFIIFLFTLRCL 1190
>AK025859-1|BAB15260.1| 460|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22206 fis, clone HRC01431. ).
Length = 460
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 277 ALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERK 393
+++ + LDL K E RLA EK++ R+++K++K
Sbjct: 421 SILLEELDLEKLREESRRLALAAKREKRKEKRRKKKKKK 459
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,457,096
Number of Sequences: 237096
Number of extensions: 1369730
Number of successful extensions: 3364
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3363
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -