Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_I01
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118396-1|AAM48425.1|  605|Drosophila melanogaster RE56844p pro...    29   4.7  
AY084186-1|AAL89924.1|  834|Drosophila melanogaster RE69157p pro...    29   4.7  
AE014134-2100|AAF53123.1|  605|Drosophila melanogaster CG14940-P...    29   4.7  
X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein ...    28   8.3  
AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA...    28   8.3  

>AY118396-1|AAM48425.1|  605|Drosophila melanogaster RE56844p
           protein.
          Length = 605

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 206 YLCPHHQKRIAIIT*FTIKIC-CLLSILH--VPLTIYISTIKYILHHYLSLPTTNS*HV 373
           Y  P+H    A+    TI  C C   +++    L I+ S +  +LH Y    TTN+ HV
Sbjct: 235 YRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHV 293


>AY084186-1|AAL89924.1|  834|Drosophila melanogaster RE69157p
           protein.
          Length = 834

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 206 YLCPHHQKRIAIIT*FTIKIC-CLLSILH--VPLTIYISTIKYILHHYLSLPTTNS*HV 373
           Y  P+H    A+    TI  C C   +++    L I+ S +  +LH Y    TTN+ HV
Sbjct: 464 YRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHV 522


>AE014134-2100|AAF53123.1|  605|Drosophila melanogaster CG14940-PA
           protein.
          Length = 605

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 206 YLCPHHQKRIAIIT*FTIKIC-CLLSILH--VPLTIYISTIKYILHHYLSLPTTNS*HV 373
           Y  P+H    A+    TI  C C   +++    L I+ S +  +LH Y    TTN+ HV
Sbjct: 235 YRNPYHNNLHAVDVMQTIHYCLCNTGLMNWLTDLEIFASLLAALLHDYEHTGTTNNFHV 293


>X62420-1|CAA44286.1| 2515|Drosophila melanogaster tudor protein
            protein.
          Length = 2515

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +3

Query: 51   GKSRPVDLRELH*CLESQFSGP-SFYVSL 134
            G  +P++  ELH C+  QF GP SFYV +
Sbjct: 2339 GVQKPLEA-ELHNCVVVQFDGPMSFYVQM 2366


>AE013599-3155|AAF46693.1| 2515|Drosophila melanogaster CG9450-PA
            protein.
          Length = 2515

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +3

Query: 51   GKSRPVDLRELH*CLESQFSGP-SFYVSL 134
            G  +P++  ELH C+  QF GP SFYV +
Sbjct: 2339 GVQKPLEA-ELHNCVVVQFDGPMSFYVQM 2366


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,431,303
Number of Sequences: 53049
Number of extensions: 377715
Number of successful extensions: 744
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)