Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_I01
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    26   0.26 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   5.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   5.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   5.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   5.5  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   9.6  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   9.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.6  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   9.6  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +3

Query: 378 SMLMLLFNVML--FKTQRLTYIGEREKDYF-DRSDQIKIL 488
           S +++LF +    F TQRL Y+  +E DY+ D ++ + IL
Sbjct: 273 SAVVILFFICWAPFHTQRLLYVYAQESDYYPDLNEWLYIL 312


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 226 EENRNNHIVYYQDLLPVINITRTFN 300
           E+N N+H V  +  + V N+T T N
Sbjct: 816 EKNINDHCVTTEQSVVVTNVTTTIN 840


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 13/61 (21%), Positives = 26/61 (42%)
 Frame = +1

Query: 196 DSDILMSPPPEENRNNHIVYYQDLLPVINITRTFNHLYQHH*IYTPSLSLTSYNQQLTRP 375
           D D  + PPP  + +++   +   L    ++ T + L +    Y+PS+        L  P
Sbjct: 315 DFDEFLPPPPNLDYHDYSRQFPRDLTTQTVSTTADVLQEEEEEYSPSVQHEFVTFDLDEP 374

Query: 376 I 378
           +
Sbjct: 375 L 375


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 268 ADLDSKLCDYC 236
           A LDSKLC  C
Sbjct: 538 APLDSKLCQQC 548


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 268 ADLDSKLCDYC 236
           A LDSKLC  C
Sbjct: 538 APLDSKLCQQC 548


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 268 ADLDSKLCDYC 236
           A LDSKLC  C
Sbjct: 538 APLDSKLCQQC 548


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 22  KCKQI*EKIMEKVDPLTSENFISAWNH 102
           KC +I ++ ++K+    + N    WNH
Sbjct: 77  KCTEIQKQNLDKLAEWFTTNEPEKWNH 103


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -1

Query: 73  RSTGLLFPLFFL 38
           R++ ++FPLFFL
Sbjct: 425 RASRIVFPLFFL 436


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 208 LMSPPPEENRNNHIVYY 258
           ++SPPP + R   +V Y
Sbjct: 901 VVSPPPTKRRTMKVVKY 917


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 208 LMSPPPEENRNNHIVYY 258
           ++SPPP + R   +V Y
Sbjct: 939 VVSPPPTKRRTMKVVKY 955


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 22  KCKQI*EKIMEKVDPLTSENFISAWNH 102
           KC +I ++ ++K+    + N    WNH
Sbjct: 77  KCTEIQKQNLDKLAEWFTTNEPEKWNH 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,250
Number of Sequences: 438
Number of extensions: 2308
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)