Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H22
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.13
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 28 3.6
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 27 6.3
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 27 6.3
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 27 8.3
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.1 bits (72), Expect = 0.13
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 238 CQKCLEYGHWSYECTGKRKIL 300
C++C E GHW YEC + K L
Sbjct: 667 CRRCAEEGHWGYECPTRPKDL 687
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 33.1 bits (72), Expect = 0.13
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 238 CQKCLEYGHWSYECTGKRKIL 300
C++C E GHW YEC + K L
Sbjct: 667 CRRCAEEGHWGYECPTRPKDL 687
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/56 (26%), Positives = 22/56 (39%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGDDCQDC 423
+G Y+C + P +++N K G C NG C VP + D C
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADDXMPLC 480
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 440 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 489
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 440 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 489
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 426 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 475
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 256 YGHWSYECTGKRKILMRPSRTQVLKLNLKTNKEGQCSNGSCKVPNKKKRGD 408
+G Y+C + P +++N K G C NG C VP + D
Sbjct: 440 FGTSRYQCLCPLSAKLNPESQACMEINEKKCAPGACGNGRC-VPCESDADD 489
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +3
Query: 273 RMHRETQDFDAPIADTGAEVESEDQQRGTVQQWQLQSA 386
R HR++ D P + +G+E +S+++ R +++ + + A
Sbjct: 553 RRHRDSDDESDPSSGSGSESDSDEEMRKAMKKAKREKA 590
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,578,830
Number of Sequences: 27780
Number of extensions: 214983
Number of successful extensions: 678
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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