Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_H22
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    33   0.002
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.5  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   4.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.5  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   5.9  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   7.8  
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      21   7.8  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 32.7 bits (71), Expect = 0.002
 Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -3

Query: 526 CRSRFQTHHCCRCPKSLMNCPRRNLKSS--LRNSCLNS 419
           CRSR  +  CC C  S MN   RN   S   RNSCL S
Sbjct: 346 CRSRRHSDSCCLCLDS-MNAVIRNFNESENRRNSCLGS 382



 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 361 TVPLCWSSDSTSA 323
           ++  CWS DST+A
Sbjct: 211 SIARCWSLDSTAA 223


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 481 SLMNCPRRNLKSSLR 437
           + M CP RN+K  +R
Sbjct: 257 AFMGCPTRNVKEMIR 271


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 481 SLMNCPRRNLKSSLR 437
           + M CP RN+K  +R
Sbjct: 128 AFMGCPTRNVKEMIR 142


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 481 SLMNCPRRNLKSSLR 437
           + M CP RN+K  +R
Sbjct: 257 AFMGCPTRNVKEMIR 271


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 422 VQTRVPQRALQIPPRTVHQALRAATAVMSLEAT 520
           VQ R+P   +Q+P   V      A A  SL  T
Sbjct: 292 VQWRIPFNGIQMPNLMVFYEKSLALAAFSLMLT 324


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 336 IQLQHLCPRWAHQNLAFPCAF 274
           +  QH C RW +   +   AF
Sbjct: 2   VDTQHFCLRWNNYQSSITSAF 22


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 336 IQLQHLCPRWAHQNLAFPCAF 274
           +  QH C RW +   +   AF
Sbjct: 2   VDTQHFCLRWNNYQSSITSAF 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,179
Number of Sequences: 438
Number of extensions: 2434
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)