Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H21
(386 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 162 1e-40
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 162 1e-40
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 162 1e-40
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 160 3e-40
03_01_0034 + 318432-318825,318902-319851 160 3e-40
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 160 3e-40
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 160 3e-40
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 158 1e-39
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 88 3e-18
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 88 3e-18
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 87 6e-18
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 79 2e-15
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 70 7e-13
12_01_0030 + 262452-263210,263332-263575,263867-264165 32 0.18
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602... 30 0.74
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 28 2.2
02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757 27 3.9
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 27 5.2
03_02_0879 + 12097602-12098120,12099215-12099254,12099550-120996... 27 5.2
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 27 5.2
11_04_0129 - 13763651-13763911,13763978-13764327,13764448-137646... 27 6.9
06_03_0981 + 26527005-26527260,26527457-26527770 27 6.9
05_01_0192 + 1394342-1396645 27 6.9
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 27 6.9
08_02_1085 + 24237804-24238403 26 9.1
07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125 26 9.1
05_05_0208 + 23275931-23275996,23276084-23276196,23276279-232764... 26 9.1
04_03_0873 + 20455860-20456042,20456864-20457102,20457596-204576... 26 9.1
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 162 bits (393), Expect = 1e-40
Identities = 77/104 (74%), Positives = 86/104 (82%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TPT+GDLNHL+S+ PGQ+ +DLRKLAV
Sbjct: 212 FRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 255
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 162 bits (393), Expect = 1e-40
Identities = 77/104 (74%), Positives = 86/104 (82%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TPT+GDLNHL+S+ PGQ+ +DLRKLAV
Sbjct: 212 FRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 255
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 162 bits (393), Expect = 1e-40
Identities = 77/104 (74%), Positives = 86/104 (82%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TPT+GDLNHL+S+ PGQ+ +DLRKLAV
Sbjct: 212 FRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 255
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 160 bits (389), Expect = 3e-40
Identities = 76/104 (73%), Positives = 86/104 (82%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 332 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 391
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TP++GDLNHL+S+ PGQ+ +DLRKLAV
Sbjct: 392 FRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 435
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 160 bits (389), Expect = 3e-40
Identities = 76/104 (73%), Positives = 86/104 (82%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TP++GDLNHL+S+ PGQ+ +DLRKLAV
Sbjct: 212 FRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 255
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 160 bits (389), Expect = 3e-40
Identities = 76/104 (73%), Positives = 86/104 (82%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 173 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 232
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TP++GDLNHL+S+ PGQ+ +DLRKLAV
Sbjct: 233 FRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 276
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 160 bits (389), Expect = 3e-40
Identities = 76/104 (73%), Positives = 86/104 (82%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TP++GDLNHL+S+ PGQ+ +DLRKLAV
Sbjct: 212 FRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 255
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 158 bits (384), Expect = 1e-39
Identities = 75/104 (72%), Positives = 85/104 (81%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEALYDIC
Sbjct: 168 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDIC 227
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+ P++GDLNHL+S+ PGQ+ +DLRKLAV
Sbjct: 228 FRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAV 271
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 87.8 bits (208), Expect = 3e-18
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R+L + PTY +LN LVS ++S TAS
Sbjct: 214 RRSLDIERPTYTNLNRLVSQ-VISSLTAS 241
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 87.8 bits (208), Expect = 3e-18
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R+L + PTY +LN LVS ++S TAS
Sbjct: 214 RRSLDIERPTYTNLNRLVSQ-VISSLTAS 241
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 86.6 bits (205), Expect = 6e-18
Identities = 40/99 (40%), Positives = 61/99 (61%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+YDIC
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADL 371
R+L + PTY +LN L+S + T+ G I D+
Sbjct: 214 RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDV 252
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 78.6 bits (185), Expect = 2e-15
Identities = 36/77 (46%), Positives = 49/77 (63%)
Frame = +3
Query: 141 KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSSPC 320
K+S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S
Sbjct: 257 KISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVI 316
Query: 321 LASPTASGSPGQIYADL 371
+ T+ G I D+
Sbjct: 317 SSLTTSLRFDGAINVDI 333
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 69.7 bits (163), Expect = 7e-13
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 251
+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN AL I
Sbjct: 154 LETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 213
Query: 252 CFRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADL 371
L L+ PT+ N LVS+ AS T PG + DL
Sbjct: 214 AVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
>12_01_0030 + 262452-263210,263332-263575,263867-264165
Length = 433
Score = 31.9 bits (69), Expect = 0.18
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 82 RSVKSTP-TES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSITRHSTIFAS 258
R++ P T S + SP P P+ P +QC + K Q +HTV++T+ +A+
Sbjct: 78 RAMSPAPSTASSPSSVPSPPPVTHYPNMRPWS--TQCDLTDKLQQQHTVTMTKKKNPYAA 135
Query: 259 ARSNYLHP 282
A HP
Sbjct: 136 AAEASKHP 143
>03_05_0136 +
21158917-21159939,21160183-21160241,21160259-21160294,
21160345-21160387,21160582-21160698,21162090-21162179,
21162329-21162436,21162547-21162588
Length = 505
Score = 29.9 bits (64), Expect = 0.74
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 7 RNSARGSHTLSEAVPAP-----VWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPT 171
R SAR S +S PAP +W S S +T T + + SSP P TPSS+ +
Sbjct: 35 RPSARRSPAVSRPDPAPSIARTIWPSSSSSNS-GNTSTRKASPSPSSPAPAASTPSSSSS 93
Query: 172 M 174
+
Sbjct: 94 V 94
>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
Length = 417
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 213 ETYCIDNEALY-DICFRTLKLSTPTYG-DLNHLVSSPCLASPTASG 344
++ +D E L+ +CF+ L+ P + DL HLV SPC + A G
Sbjct: 28 QSVSMDMEVLHCPVCFQILR--PPVFQCDLGHLVCSPCRDNLPAGG 71
>02_05_0935 - 32859353-32859360,32859476-32860438,32860535-32860757
Length = 397
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 7 RNSARGSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
+N +R +S A P P + S S S T T SSP P Y P+
Sbjct: 125 KNRSRKPVEMSLATPPPPSSSATSAASNTSAGVAPTTTTTSSPAPSYSRPA 175
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 49 PAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNP 168
P PVWA L R+ TPT S ++P P TPS +P
Sbjct: 155 PVPVWAAPLPART--PTPTPSAPPRAAAPSPA-GTPSPSP 191
>03_02_0879 +
12097602-12098120,12099215-12099254,12099550-12099601,
12099946-12100008,12100079-12100148,12100452-12100778
Length = 356
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 4 CRNSARGSHTLSEAVPAPVWA--HYLSQRSVKSTPTES*THTQSSPRPK 144
C N+ G HT+ PAP Y+ +V T+S + T +S K
Sbjct: 98 CNNNTHGGHTVPTFFPAPACGAPDYMDTITVPDNHTQSGSSTVTSDAAK 146
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 27.1 bits (57), Expect = 5.2
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -2
Query: 352 PGEPEAVGDARHGEETK*LRSP*VGVDSLSVRKQIS*SASLSIQYVSSVFSTSWCT 185
P PE+VGD G +GVD +K+++ + ++I +S+V + CT
Sbjct: 554 PSAPESVGDGAFGNNRNARAMKPLGVDVGRPKKRVN-GSLIAIAVLSTVIALIICT 608
>11_04_0129 -
13763651-13763911,13763978-13764327,13764448-13764606,
13764677-13765160
Length = 417
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 85 SVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS 198
++K++PT+ T +SP P +P+S PT + C N+
Sbjct: 19 AIKTSPTDL---TAASPSPLPASPTSAPTWYSTVCPNN 53
>06_03_0981 + 26527005-26527260,26527457-26527770
Length = 189
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 19 RGSHTLSEAVPAPVWAHYLSQ 81
+ SHTL A P+P W ++S+
Sbjct: 127 KSSHTLCSARPSPSWVRFVSR 147
>05_01_0192 + 1394342-1396645
Length = 767
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 94 STPTES*THTQSSPRPKYQTPSSNP 168
STPT S + + S P P+ TPSS P
Sbjct: 245 STPTSS-SSSPSKPSPRMATPSSPP 268
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 270 LSTPTYGDLNHLVSSPCLASPTASGSPGQ 356
+STP+Y SP ASP SPGQ
Sbjct: 307 VSTPSYPSSPGATMSPAPASPPLFSSPGQ 335
>08_02_1085 + 24237804-24238403
Length = 199
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 10 NSARGSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNP 168
NS+ GSHT P+P + S ++ + P ++ +P K + PS P
Sbjct: 39 NSSSGSHTSPSKAPSPSKSPEKSGKAPAAAPPKA--AAAKAPSGKSEAPSEAP 89
>07_03_0573 + 19614899-19617155,19617384-19617476,19618103-19618125
Length = 790
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 222 CIDNEALYDICFRTLKLSTPTYGDLNHLVSSPCLA 326
C NE L+++C + L+L+ TY N L++ C A
Sbjct: 477 CAANELLHEMCSKGLELNIFTY---NSLINGLCKA 508
>05_05_0208 +
23275931-23275996,23276084-23276196,23276279-23276459,
23276590-23276674,23276974-23277104,23277194-23277432,
23277512-23277748,23277838-23277992,23278039-23278271,
23278359-23278521,23278613-23278818,23278960-23279019,
23279106-23279198,23279406-23279569,23280070-23280138,
23280241-23280382,23280490-23280546
Length = 797
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 263 AQTIYTHLWRSQSLSLLTMSGVTNCLR 343
A +IY HLW +++ LL + GV L+
Sbjct: 318 APSIYGHLWIKKAVVLLMLGGVEKNLK 344
>04_03_0873 +
20455860-20456042,20456864-20457102,20457596-20457692,
20457816-20457857,20458060-20458186,20458879-20458991,
20459063-20459126,20459218-20459311,20459393-20459501,
20459803-20459859,20460064-20460126,20460158-20460195,
20460835-20461028,20461266-20461477
Length = 543
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 237 PRYRYSMFRLCFLRVGALRESHCRVRRRCLILW 139
PRYR F L L VGAL ++ R W
Sbjct: 177 PRYRLDRFDLVVLTVGALHQADSAALRTAASDW 209
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,771,567
Number of Sequences: 37544
Number of extensions: 218332
Number of successful extensions: 659
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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