Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H21
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 183 3e-47
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 183 3e-47
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 181 1e-46
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 180 4e-46
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 179 7e-46
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 177 2e-45
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 117 3e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 117 3e-27
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 86 9e-18
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 83 9e-17
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 83 9e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 80 6e-16
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 79 1e-15
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 79 1e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 79 1e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 79 1e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 79 1e-15
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 79 1e-15
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 79 1e-15
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 79 1e-15
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 79 1e-15
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 77 4e-15
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 75 1e-14
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 68 3e-12
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 68 3e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 68 3e-12
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 31 0.37
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 30 0.49
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 29 0.86
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 29 0.86
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 29 0.86
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 29 0.86
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 0.86
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 29 0.86
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 0.86
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 29 0.86
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 29 0.86
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 29 0.86
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 1.5
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical pr... 28 2.0
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 28 2.0
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 4.6
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 27 6.1
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 27 6.1
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 26 8.1
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 183 bits (446), Expect = 3e-47
Identities = 87/104 (83%), Positives = 92/104 (88%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TPTYGDLNHLVS+ T PGQ+ ADLRKLAV
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 183 bits (446), Expect = 3e-47
Identities = 87/104 (83%), Positives = 92/104 (88%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TPTYGDLNHLVS+ T PGQ+ ADLRKLAV
Sbjct: 212 FRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAV 255
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 181 bits (441), Expect = 1e-46
Identities = 87/104 (83%), Positives = 91/104 (87%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKL+TPTYGDLNHLVS T PGQ+ ADLRKLAV
Sbjct: 212 FRTLKLTTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAV 255
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 180 bits (437), Expect = 4e-46
Identities = 86/104 (82%), Positives = 91/104 (87%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
FRTLKLS PTYGDLNHLVS T PGQ+ ADLRKLAV
Sbjct: 212 FRTLKLSNPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAV 255
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 179 bits (435), Expect = 7e-46
Identities = 85/104 (81%), Positives = 91/104 (87%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC
Sbjct: 152 ISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
+RTLKL+ PTYGDLNHLVS T PGQ+ ADLRKLAV
Sbjct: 212 YRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAV 255
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 177 bits (431), Expect = 2e-45
Identities = 84/104 (80%), Positives = 91/104 (87%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISKIREE+PDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC
Sbjct: 152 ISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKLAV 386
+RTLKL+ PTYGDLNHLVS T PGQ+ ADLRKLAV
Sbjct: 212 YRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAV 255
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 117 bits (282), Expect = 3e-27
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISK+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CIDNEA++DIC
Sbjct: 152 ISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDIC 211
Query: 255 FRTLKL-STPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKL 380
LKL + TYGDLNHL S T G + D+RKL
Sbjct: 212 QYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL 254
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 117 bits (282), Expect = 3e-27
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
ISK+REEY D+ ++T S++PS KVSDTVVEPYNA LS+ L++N DE +CIDNEA++DIC
Sbjct: 152 ISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDIC 211
Query: 255 FRTLKL-STPTYGDLNHLVSSPCLASPTASGSPGQIYADLRKL 380
LKL + TYGDLNHL S T G + D+RKL
Sbjct: 212 QYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL 254
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 85.8 bits (203), Expect = 9e-18
Identities = 37/89 (41%), Positives = 63/89 (70%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ EY + +S+ P+P++S +VVEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 151 MERLSAEYGKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 210
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L++S PTY +LN ++S ++S TAS
Sbjct: 211 RRNLRVSRPTYNNLNRIISQ-VVSSITAS 238
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 82.6 bits (195), Expect = 9e-17
Identities = 38/89 (42%), Positives = 61/89 (68%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ EY + +++ P+P+VS ++VEPYN+ L H +E++D T+ +DNEA+YDIC
Sbjct: 160 MERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDIC 219
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L L+ PTY +LN LV+ ++S TAS
Sbjct: 220 RRNLDLARPTYTNLNRLVAQ-IISSITAS 247
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 82.6 bits (195), Expect = 9e-17
Identities = 38/89 (42%), Positives = 61/89 (68%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ EY + +++ P+P+VS ++VEPYN+ L H +E++D T+ +DNEA+YDIC
Sbjct: 132 MERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDIC 191
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L L+ PTY +LN LV+ ++S TAS
Sbjct: 192 RRNLDLARPTYTNLNRLVAQ-IISSITAS 219
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 79.8 bits (188), Expect = 6e-16
Identities = 35/89 (39%), Positives = 61/89 (68%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + + + P+P+VS ++VEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 159 MERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 218
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L L+ PTY +LN L++ ++S TAS
Sbjct: 219 RRNLDLARPTYTNLNRLIAQ-VISSVTAS 246
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 79.0 bits (186), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN ++S ++S TAS
Sbjct: 212 RRNLSVDRPSYTNLNRIISQ-VVSSITAS 239
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 79.0 bits (186), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 154 MERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN L+ ++S TAS
Sbjct: 214 RRNLDIERPSYTNLNRLIGQ-IVSSITAS 241
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 79.0 bits (186), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 153 MERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 212
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN L+ ++S TAS
Sbjct: 213 RRNLDIERPSYTNLNRLIGQ-IVSSITAS 240
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 79.0 bits (186), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 154 MERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN L+ ++S TAS
Sbjct: 214 RRNLDIERPSYTNLNRLIGQ-IVSSITAS 241
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 79.0 bits (186), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D ++ +DNEA+YDIC
Sbjct: 154 MERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDIC 213
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN L+ ++S TAS
Sbjct: 214 RRNLDIERPSYTNLNRLIGQ-IVSSITAS 241
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN ++S ++S TAS
Sbjct: 212 RRNLDVERPSYTNLNRIISQ-VVSSITAS 239
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN ++S ++S TAS
Sbjct: 212 KRNLDVDRPSYTNLNRIISQ-VVSSITAS 239
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN ++S ++S TAS
Sbjct: 212 RRNLDVERPSYTNLNRIISQ-VVSSITAS 239
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/89 (39%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN ++S ++S TAS
Sbjct: 212 KRNLDVDRPSYTNLNRIISQ-VVSSITAS 239
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 77.0 bits (181), Expect = 4e-15
Identities = 34/89 (38%), Positives = 58/89 (65%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P+V VVEPYN+ L+ H +E++D + +DNEA+YDIC
Sbjct: 152 MERLSVDYGKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 211
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
R L + P+Y +LN ++S ++S TAS
Sbjct: 212 RRNLSVDRPSYTNLNRIISQ-VVSSITAS 239
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 75.4 bits (177), Expect = 1e-14
Identities = 34/89 (38%), Positives = 60/89 (67%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ E+ + +SV P+P+VS +VVEPYN+ L+ H +E +D ++ +DNEA+YD+C
Sbjct: 157 MERLSVEFGKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLC 216
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
+ L + P+Y +LN L++ ++S TAS
Sbjct: 217 RQKLHVERPSYSNLNRLIAQ-VVSSITAS 244
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 67.7 bits (158), Expect = 3e-12
Identities = 31/89 (34%), Positives = 59/89 (66%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 254
+ ++ +Y + +S+ P+P++S ++VEPYN+ L+ H +E++D ++ +DNEA+Y+I
Sbjct: 154 MERLSIDYGKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEIT 213
Query: 255 FRTLKLSTPTYGDLNHLVSSPCLASPTAS 341
L + +PTY LN L++ ++S TAS
Sbjct: 214 KVNLGVRSPTYTHLNRLLAQ-VVSSITAS 241
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 67.7 bits (158), Expect = 3e-12
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 251
+ ++RE +P +++ TYSV + S D VV PYN LS+ +L+EN D +DN AL+ +
Sbjct: 156 LERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRL 215
Query: 252 CFRTLKLSTPTYGDLNHLVS 311
K TPT+ +N LV+
Sbjct: 216 AAGKFKTDTPTFDHINSLVA 235
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 67.7 bits (158), Expect = 3e-12
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +3
Query: 75 ISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 251
+ ++RE +P +++ TYSV + S D VV PYN LS+ +L+EN D +DN AL+ +
Sbjct: 156 LERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRL 215
Query: 252 CFRTLKLSTPTYGDLNHLVS 311
K TPT+ +N LV+
Sbjct: 216 AAGKFKTDTPTFDHINSLVA 235
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 30.7 bits (66), Expect = 0.37
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 115 THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSITRHSTIFASARSNYLHPPMEI 294
T + +S PK + SS P RLS T S + SIT H T+++S + +
Sbjct: 56 TGSTTSDTPKLSS-SSAPRSRLSFTTPSSTSTNLPRTSITSHKTLYSSPAAARVSVSTND 114
Query: 295 SIT*S-PHHVWR 327
S++ S PH+ +R
Sbjct: 115 SLSHSTPHNTYR 126
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 67 HYLSQRSVKSTPTES*THTQSSPRPKYQTPSSN 165
H+ +Q+ ST T+ H Q P P+Y PSS+
Sbjct: 96 HHQNQQHQASTSTQQFHHPQRPPPPQYDQPSSS 128
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 739 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 794
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 739 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 794
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 605 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 660
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 739 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 794
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 739 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 794
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 739 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 794
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 605 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 660
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 739 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 794
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 319 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 374
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 29.5 bits (63), Expect = 0.86
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 4 CRNSARGSHTLS----EAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPS 159
CR S RG+ S ++ +P ++ Y SV + H+Q+S RP Q PS
Sbjct: 739 CRTSQRGAAATSTFGQHSLRSPGYSSYSPHLSVSADKDTMSMHSQTSRRPSSQKPS 794
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +1
Query: 94 STPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSITRHSTIFASARSNY 273
+TPT + T T ++P+P T +S T + + + T + T + T + + ++ +
Sbjct: 606 TTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQT-W 664
Query: 274 LHPPMEISIT*SPHHVWRHQLPQVPR 351
PP +P V P++PR
Sbjct: 665 TAPPTTTVKRTTPQTV-PTTTPKIPR 689
Score = 26.2 bits (55), Expect = 8.1
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +1
Query: 73 LSQRSVKSTPTES*THTQSSPRPKYQT--PSSNPTMRLSQCTNS*KTQTKHTVSITRHST 246
L R V + P + T + ++ +P T PS+ PT + T + K T + S + +T
Sbjct: 575 LPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTT 634
Query: 247 IFASARSNYLHPPMEISIT*SP 312
S + P + + P
Sbjct: 635 TTTSTTATTTPQPTTTTTSEKP 656
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +1
Query: 94 STPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSITRHSTIFASARSNY 273
+TPT + T T ++P+P T +S T + + + T + T + T + + ++ +
Sbjct: 606 TTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQT-W 664
Query: 274 LHPPMEISIT*SPHHVWRHQLPQVPR 351
PP +P V P++PR
Sbjct: 665 TAPPTTTVKRTTPQTV-PTTTPKIPR 689
Score = 26.2 bits (55), Expect = 8.1
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +1
Query: 73 LSQRSVKSTPTES*THTQSSPRPKYQT--PSSNPTMRLSQCTNS*KTQTKHTVSITRHST 246
L R V + P + T + ++ +P T PS+ PT + T + K T + S + +T
Sbjct: 575 LPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTT 634
Query: 247 IFASARSNYLHPPMEISIT*SP 312
S + P + + P
Sbjct: 635 TTTSTTATTTPQPTTTTTSEKP 656
>Z46787-6|CAA86744.1| 392|Caenorhabditis elegans Hypothetical
protein C16C10.6 protein.
Length = 392
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 22 GSHTLSEAVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLS 183
G +T+S+ A A + QR+ TP S +PR + +T S +PT R S
Sbjct: 262 GLNTVSKK-KATTHAERIRQRNYTPTPPSSDDEGARAPRARRRTSSPSPTSRKS 314
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 28.3 bits (60), Expect = 2.0
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +1
Query: 94 STPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSITRHSTIFASARSNY 273
S P S T + SSP P +S PT SQ T S +T + +T ++I S +
Sbjct: 275 SQPVSSSTSSTSSPAPTNPPTTSRPT-TASQSTASQNVETTTKLGLT--ASITVSIMTTL 331
Query: 274 LH 279
LH
Sbjct: 332 LH 333
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 94 STPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSITRHST 246
+TPT + T T ++P TP++ T + T T T T + T +T
Sbjct: 141 TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 191
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 76 SQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSITRHST 246
+ + +TPT + T T + P TP++ PT + T + +T + + T +T
Sbjct: 251 TSETTTTTPTTT-TQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTT 306
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 43 AVPAPVWAHYLSQRSVKSTPTES*THTQSSPRPKYQTPSS 162
A+ A V A + S TP+ES +SP P+ Q+P++
Sbjct: 311 AITAKVMAAEAAAGSSPKTPSESGGSRAASPAPRAQSPAT 350
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 65 HITYLKDP*RVPRQNHEHILSRPLAQSIRHRRRTLQCDSLSA 190
H+ ++K P P ++ EH +P IR +R L+C+S SA
Sbjct: 1052 HLKFIKAPYISPNKD-EHGNLKPSELFIRWQRALLECESHSA 1092
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +1
Query: 70 YLSQRSVKSTPTES*THTQSSPRPKYQTPSSNPTMRLSQCTNS*KTQTKHTVSITRH 240
++ ++ ST T S T T ++ + T +++P + T++ T+T T T H
Sbjct: 101 HVDPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTTTETPTTSEATTH 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,964,154
Number of Sequences: 27780
Number of extensions: 181663
Number of successful extensions: 660
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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