Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H19
(606 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113474-1|AAI13475.1| 262|Homo sapiens cerebellar degeneration... 36 0.15
BC113472-1|AAI13473.1| 262|Homo sapiens cerebellar degeneration... 36 0.15
AL078639-1|CAI42370.1| 262|Homo sapiens cerebellar degeneration... 36 0.15
BC125129-1|AAI25130.1| 892|Homo sapiens zinc finger protein 512... 31 2.4
BC125128-1|AAI25129.1| 892|Homo sapiens zinc finger protein 512... 31 2.4
AL118506-12|CAC15498.3| 892|Homo sapiens RP4-591C20.6 protein. 31 2.4
AB033022-1|BAA86510.1| 851|Homo sapiens KIAA1196 protein protein. 31 2.4
AL645585-1|CAI41598.1| 645|Homo sapiens family with sequence si... 31 3.1
BC035026-1|AAH35026.1| 645|Homo sapiens family with sequence si... 31 4.2
U48959-1|AAC18423.2| 1914|Homo sapiens myosin light chain kinase... 30 5.5
AY424270-1|AAR29062.1| 1914|Homo sapiens myosin lignt chain poly... 30 5.5
AY424269-1|AAR29061.1| 1845|Homo sapiens myosin light chain poly... 30 5.5
AY339601-1|AAQ02673.1| 1914|Homo sapiens long myosin light chain... 30 5.5
AF069603-1|AAD15923.1| 1793|Homo sapiens myosin light chain kina... 30 5.5
AF069602-1|AAD15922.1| 1862|Homo sapiens myosin light chain kina... 30 5.5
AF069601-1|AAD15921.2| 1845|Homo sapiens myosin light chain kina... 30 5.5
D28118-1|BAA05663.1| 516|Homo sapiens DB1 protein. 30 7.3
BX470253-2|CAI16294.1| 1530|Homo sapiens chromosome 1 open readi... 30 7.3
AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein. 30 7.3
AK127470-1|BAC86994.1| 1184|Homo sapiens ). protein. 30 7.3
AF506819-1|AAM33633.1| 950|Homo sapiens URB protein. 29 9.6
>BC113474-1|AAI13475.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 35.5 bits (78), Expect = 0.15
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 110 SMGRREFTGRREFTYWREFTGRREFTGRREFTGRREFTG 226
++GR F+GR F R F+GR + +GR GRR F+G
Sbjct: 135 AIGRCGFSGRHGFFGRRRFSGRPKLSGRLGLLGRRGFSG 173
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 107 GSMGRREFTGRREFTYWREFTGRREFTGRREFTGR 211
G GR F GRR F+ + +GR GRR F+GR
Sbjct: 140 GFSGRHGFFGRRRFSGRPKLSGRLGLLGRRGFSGR 174
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 164 FTGRREFTGRREFTGRREFTG*CDSTGNKG 253
F+GR F GRR F+GR + +G G +G
Sbjct: 141 FSGRHGFFGRRRFSGRPKLSGRLGLLGRRG 170
>BC113472-1|AAI13473.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 35.5 bits (78), Expect = 0.15
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 110 SMGRREFTGRREFTYWREFTGRREFTGRREFTGRREFTG 226
++GR F+GR F R F+GR + +GR GRR F+G
Sbjct: 135 AIGRCGFSGRHGFFGRRRFSGRPKLSGRLGLLGRRGFSG 173
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 107 GSMGRREFTGRREFTYWREFTGRREFTGRREFTGR 211
G GR F GRR F+ + +GR GRR F+GR
Sbjct: 140 GFSGRHGFFGRRRFSGRPKLSGRLGLLGRRGFSGR 174
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 164 FTGRREFTGRREFTGRREFTG*CDSTGNKG 253
F+GR F GRR F+GR + +G G +G
Sbjct: 141 FSGRHGFFGRRRFSGRPKLSGRLGLLGRRG 170
>AL078639-1|CAI42370.1| 262|Homo sapiens cerebellar
degeneration-related protein 1, 34kDa protein.
Length = 262
Score = 35.5 bits (78), Expect = 0.15
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 110 SMGRREFTGRREFTYWREFTGRREFTGRREFTGRREFTG 226
++GR F+GR F R F+GR + +GR GRR F+G
Sbjct: 135 AIGRCGFSGRHGFFGRRRFSGRPKLSGRLGLLGRRGFSG 173
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 107 GSMGRREFTGRREFTYWREFTGRREFTGRREFTGR 211
G GR F GRR F+ + +GR GRR F+GR
Sbjct: 140 GFSGRHGFFGRRRFSGRPKLSGRLGLLGRRGFSGR 174
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 164 FTGRREFTGRREFTGRREFTG*CDSTGNKG 253
F+GR F GRR F+GR + +G G +G
Sbjct: 141 FSGRHGFFGRRRFSGRPKLSGRLGLLGRRG 170
>BC125129-1|AAI25130.1| 892|Homo sapiens zinc finger protein 512B
protein.
Length = 892
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 243 PVESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
PV PV +P+ +PV +PV + + +PV+ RPM
Sbjct: 179 PVTISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPM 222
>BC125128-1|AAI25129.1| 892|Homo sapiens zinc finger protein 512B
protein.
Length = 892
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 243 PVESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
PV PV +P+ +PV +PV + + +PV+ RPM
Sbjct: 179 PVTISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPM 222
>AL118506-12|CAC15498.3| 892|Homo sapiens RP4-591C20.6 protein.
Length = 892
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 243 PVESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
PV PV +P+ +PV +PV + + +PV+ RPM
Sbjct: 179 PVTISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPM 222
>AB033022-1|BAA86510.1| 851|Homo sapiens KIAA1196 protein protein.
Length = 851
Score = 31.5 bits (68), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 243 PVESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
PV PV +P+ +PV +PV + + +PV+ RPM
Sbjct: 138 PVTISRPVGVSKPIGVSKPVTIGKPVGVSKPIGISKPVSVGRPM 181
>AL645585-1|CAI41598.1| 645|Homo sapiens family with sequence
similarity 47, member B protein.
Length = 645
Score = 31.1 bits (67), Expect = 3.1
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -1
Query: 258 SCPLLPVESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRP 133
SCP P PV+ RP + PV+SRRP + V+S RP
Sbjct: 187 SCPRPP---ETPVSRLRPQLPKTPVSSRRPEPPKTRVSSLRP 225
>BC035026-1|AAH35026.1| 645|Homo sapiens family with sequence
similarity 47, member B protein.
Length = 645
Score = 30.7 bits (66), Expect = 4.2
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -1
Query: 258 SCPLLPVESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRP 133
SCP P PV+ RP + PV+SRRP + V+S RP
Sbjct: 187 SCPRPP---ETPVSRLRPHLPKTPVSSRRPEPPKTRVSSLRP 225
>U48959-1|AAC18423.2| 1914|Homo sapiens myosin light chain kinase
protein.
Length = 1914
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 240 VESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
VES P+++ +P +PV + +P + + + + +P + +PM
Sbjct: 1008 VESSKPLSNAQPSGPLKPVGNAKPAETLKPMGNAKPAETLKPM 1050
>AY424270-1|AAR29062.1| 1914|Homo sapiens myosin lignt chain
polypeptide kinase isoform 1 protein.
Length = 1914
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 240 VESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
VES P+++ +P +PV + +P + + + + +P + +PM
Sbjct: 1008 VESSKPLSNAQPSGPLKPVGNAKPAETLKPMGNAKPAETLKPM 1050
>AY424269-1|AAR29061.1| 1845|Homo sapiens myosin light chain
polypeptide kinase isoform 2 protein.
Length = 1845
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 240 VESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
VES P+++ +P +PV + +P + + + + +P + +PM
Sbjct: 939 VESSKPLSNAQPSGPLKPVGNAKPAETLKPMGNAKPAETLKPM 981
>AY339601-1|AAQ02673.1| 1914|Homo sapiens long myosin light chain
kinase protein.
Length = 1914
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 240 VESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
VES P+++ +P +PV + +P + + + + +P + +PM
Sbjct: 1008 VESSKPLSNAQPSGPLKPVGNAKPAETLKPMGNAKPAETLKPM 1050
>AF069603-1|AAD15923.1| 1793|Homo sapiens myosin light chain kinase
isoform 3B protein.
Length = 1793
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 240 VESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
VES P+++ +P +PV + +P + + + + +P + +PM
Sbjct: 939 VESSKPLSNAQPSGPLKPVGNAKPAETLKPMGNAKPAETLKPM 981
>AF069602-1|AAD15922.1| 1862|Homo sapiens myosin light chain kinase
isoform 3A protein.
Length = 1862
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 240 VESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
VES P+++ +P +PV + +P + + + + +P + +PM
Sbjct: 1008 VESSKPLSNAQPSGPLKPVGNAKPAETLKPMGNAKPAETLKPM 1050
>AF069601-1|AAD15921.2| 1845|Homo sapiens myosin light chain kinase
isoform 2 protein.
Length = 1845
Score = 30.3 bits (65), Expect = 5.5
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = -1
Query: 240 VESHHPVNSRRPVNSRRPVNSRRPVNSRQYVNSRRPVNSRRPM 112
VES P+++ +P +PV + +P + + + + +P + +PM
Sbjct: 939 VESSKPLSNAQPSGPLKPVGNAKPAETLKPMGNAKPAETLKPM 981
>D28118-1|BAA05663.1| 516|Homo sapiens DB1 protein.
Length = 516
Score = 29.9 bits (64), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 244 ARGIASPRELTPPRELTSPRELASPCELTPIRELTSPRELTSP 116
A + SP ++ +TSP + P +T +TSP LT+P
Sbjct: 416 AMSMRSPVNVSSAVNITSPMNIGHPVTITSPLSMTSPLTLTTP 458
>BX470253-2|CAI16294.1| 1530|Homo sapiens chromosome 1 open reading
frame 173 protein.
Length = 1530
Score = 29.9 bits (64), Expect = 7.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 250 LIARGIASPRELTPPRELTSPRELASPCELTPI 152
L+ G +SP LT PR T+P + P L P+
Sbjct: 137 LVDEGHSSPLALTAPRPYTAPGNMQPPIRLQPL 169
>AK131081-1|BAC85131.1| 440|Homo sapiens FLJ00280 protein protein.
Length = 440
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 235 IASPRELTPPRELTSPRELASPCELTPIRELTSPRELTSP 116
+ +P L P L +PR L +P L R L +PR L +P
Sbjct: 250 VPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTPRTLPTP 289
>AK127470-1|BAC86994.1| 1184|Homo sapiens ). protein.
Length = 1184
Score = 29.9 bits (64), Expect = 7.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 250 LIARGIASPRELTPPRELTSPRELASPCELTPI 152
L+ G +SP LT PR T+P + P L P+
Sbjct: 137 LVDEGHSSPLALTAPRPYTAPGNMQPPIRLQPL 169
>AF506819-1|AAM33633.1| 950|Homo sapiens URB protein.
Length = 950
Score = 29.5 bits (63), Expect = 9.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 252 PLLPVESHHPVNSRRPVNSRRP-VNSRRPVNSRQYVNSRRPVNSRRP 115
P P SH P + + +RRP V+ SR+ + RP +RRP
Sbjct: 387 PWTPSPSHRPXTTTEVITARRPSVSENLYPPSRKDQHRERPQTTRRP 433
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,196,757
Number of Sequences: 237096
Number of extensions: 1289151
Number of successful extensions: 2438
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2365
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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