Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H17
(341 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1123 - 24152403-24152515,24152761-24152854,24152946-241530... 36 0.008
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396... 29 0.95
10_01_0048 - 659107-660402,661650-661867,662299-662335 29 1.3
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 29 1.3
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419... 28 1.7
03_02_0616 - 9874882-9874974,9875067-9875189,9875284-9875379,987... 28 1.7
07_01_0547 + 4052618-4052659,4055575-4055741,4055839-4056556,405... 28 2.2
10_08_0414 + 17755427-17756000,17756181-17756308,17756434-177566... 27 2.9
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 27 2.9
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 27 2.9
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894... 27 3.9
08_01_0656 + 5652383-5653009,5653260-5653736,5654969-5655289,565... 27 3.9
04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966 27 3.9
12_02_0700 + 22259921-22260207,22264678-22264750,22265062-222658... 27 5.1
11_04_0142 + 14027726-14029081 27 5.1
11_04_0138 - 13931937-13932835,13933457-13933460 27 5.1
10_06_0184 - 11577331-11577360,11577616-11577722,11578048-115781... 27 5.1
07_03_1516 + 27367518-27368552,27368828-27369097,27369616-27370062 27 5.1
03_05_0039 - 20125473-20126222 27 5.1
03_02_0275 + 7042433-7042732,7042864-7043140,7043751-7044231,704... 27 5.1
02_04_0538 + 23739830-23740126,23740205-23740261,23740344-237404... 27 5.1
01_06_0170 + 27178952-27179572,27181631-27181816,27182245-271822... 27 5.1
12_01_0427 + 3359766-3360092,3360425-3360541,3360738-3360893,336... 26 6.7
11_08_0066 - 28131521-28132012 26 6.7
10_03_0035 - 7265037-7265455,7265684-7265812,7265909-7265951,726... 26 6.7
09_02_0610 - 11206198-11206588,11206812-11207001,11207116-112071... 26 6.7
01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115... 26 6.7
01_05_0552 - 23173106-23173184,23173266-23173411,23173543-231740... 26 6.7
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 26 8.9
11_01_0483 - 3718104-3718802,3718817-3719308 26 8.9
09_04_0030 + 13940168-13940250,13940703-13941714 26 8.9
09_02_0498 + 9910165-9910212,9910238-9910732 26 8.9
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 26 8.9
03_03_0217 + 15500943-15502196 26 8.9
02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704 26 8.9
02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203 26 8.9
>07_03_1123 -
24152403-24152515,24152761-24152854,24152946-24153087,
24153614-24153754,24154186-24154385
Length = 229
Score = 35.9 bits (79), Expect = 0.008
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 63 RTIAHAIRKPATVIVNQALMASIVTGAGRIITVSQWKAARIATAMSGDRQTTSATCLDNV 242
RT R V + LMA +++G GR +A R A + +A C
Sbjct: 64 RTFCSTERLCTIVCIGYKLMACVISGVGRKCRSEGAEAVRYVKAWKSMSRCGAAACRRGD 123
Query: 243 PARKTSRAGDVTDVWKIQSVGL-TDRDATI 329
A SR V V+ + +VG+ TD+++++
Sbjct: 124 TALSVSRDSVVAVVYSVVAVGVFTDKESSV 153
>03_01_0527 +
3960982-3961290,3961371-3961464,3961898-3962084,
3962194-3962449,3962561-3962773,3962856-3962942,
3963089-3963223,3963296-3963409,3963507-3963754,
3963824-3963904,3963979-3964210,3964340-3964438,
3964513-3964701,3964928-3965023
Length = 779
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 173 GCKDC--DCDEWGSTNYQCDMSGQCSCQENVEGRRCD 277
G K C DC+ G NY+ G+C C G+RC+
Sbjct: 106 GTKRCEQDCNGQGVCNYEL---GECRCFHGYAGKRCE 139
>10_01_0048 - 659107-660402,661650-661867,662299-662335
Length = 516
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 93 ATVIVNQALMASIVTGAGRIITVSQWKAARIATAMSGDRQTTSA-TCLDNVPARKTSRAG 269
A ++V L + V A R +T S+ + +G + +A V R+ + AG
Sbjct: 340 AAMLVLVPLYDAAVVPAARRLTGSERGLTELQRIGAGMALSVAAMAAAATVEGRRLAAAG 399
Query: 270 DVTDVWKIQSVGLTDRDATIAHL 338
+V+ W++ L A +AH+
Sbjct: 400 EVSIAWQVPQYVLLGASAVLAHI 422
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = -1
Query: 248 GRNIVQTCRTGSLSIPTHRSRNPCSLPLRNRNDTPGTGHNGCHQCLVYNNSGRFADGMSY 69
GR+ + S + R+R+P SL R D GTG GC V SG+ ADG
Sbjct: 671 GRSQTRHSSRCSCRYRSRRTRSPSSLTPR---DQDGTGDAGCATTKVVAVSGQ-ADGDQQ 726
Query: 68 CT 63
C+
Sbjct: 727 CS 728
>09_03_0111 -
12440818-12441129,12441242-12441585,12441663-12441989,
12443444-12443602,12443687-12443784,12444745-12444821
Length = 438
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +2
Query: 8 DNIDSGDGCKACDCNLEGSYNSSC-HPQTGHCYCKPGIDGIH 130
D D+G G C +++G Y C H G+ Y K G I+
Sbjct: 20 DGSDAGGGNSNCVDDIKGGYRCKCSHGYEGNPYIKDGCKDIN 61
>03_02_0616 -
9874882-9874974,9875067-9875189,9875284-9875379,
9875457-9875666,9875718-9875812,9876032-9876123,
9876539-9876660
Length = 276
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 215 YQCDMSGQCSCQENVEGRRCDRCMENTKRRL 307
YQC + +CS + R + C ENTKR++
Sbjct: 78 YQCPLFSKCSLTIDTVIRPDNGCSENTKRQI 108
>07_01_0547 +
4052618-4052659,4055575-4055741,4055839-4056556,
4056678-4057114,4057241-4057315,4057490-4057673,
4057759-4057854,4057952-4058018,4058556-4058715,
4058808-4059199,4059254-4059300
Length = 794
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +2
Query: 8 DNIDSGDGCKACDCNLEGSYNSSCHPQTGHCYC 106
DN D G+ CK C C C YC
Sbjct: 459 DNGDDGEACKRCSCKKSKCLKLYCECFAAGVYC 491
>10_08_0414 +
17755427-17756000,17756181-17756308,17756434-17756694,
17756774-17757036,17758662-17759019
Length = 527
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 105 VNQALMASIVTGAGRIITVSQWKAARIATAMSG 203
++ L +VTG G I+T S K A + A+ G
Sbjct: 181 ISNVLQLEVVTGRGEIVTCSPTKDAELFNAVLG 213
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +2
Query: 143 RAYHYGFSVEGCKDCDCDEWGSTNYQCDMSG--QCSCQENVEGRRCDRCMENTKRRLDGQ 316
R ++ G +DC +W + Y+C G + +CQ + R +R + G+
Sbjct: 103 RCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNCQNSPRNLRRERSYSCSPSPRRGR 162
Query: 317 G 319
G
Sbjct: 163 G 163
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 44 DCNLEGSYNSSCHPQTGHCYCKPGIDG--IHCDRCRAYHYGFSVEGCKDCDCDEWGSTNY 217
DCNL+G N+S + P +G I DR Y+ E +DC G +
Sbjct: 554 DCNLDGQ-NTSGRIEGPSEEIPPNANGMDIDSDREETYNVEGIAENSEDCRVRGGGDIDT 612
Query: 218 QCDMS 232
+C++S
Sbjct: 613 ECNLS 617
>12_02_1036 -
25587313-25587890,25589209-25589272,25589356-25589448,
25589533-25589683,25590474-25590539,25590594-25590907
Length = 421
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +2
Query: 17 DSGDGCKACDCNLEGSYNSSCHPQTGHCYCKPGIDGIHCDRC 142
D G+GCK+C C C +C + CD C
Sbjct: 109 DEGEGCKSCSCKKSKCLKLYCVCFASGSHCS---ESCGCDPC 147
>08_01_0656 +
5652383-5653009,5653260-5653736,5654969-5655289,
5655434-5655589,5656062-5656127,5656196-5656315
Length = 588
Score = 27.1 bits (57), Expect = 3.9
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 281 ICHIACPRRFPGRNIVQTCR-TGSLSIPTHRSRNPCSLPLRNRNDTP 144
+C CPRR P R R TGS PT C R R P
Sbjct: 1 MCSTKCPRRKPSRPAGAALRKTGSAPSPTRSCTTSCRSCGRGRWRAP 47
>04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966
Length = 766
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Frame = +2
Query: 14 IDSGDGCKACDCNLEGSYNSSCHPQTGHCYCKPGIDGIHCDRCRAYHYG-FSVEGCKDC- 187
+D G + CD +C C+ G C+ Y + +G C
Sbjct: 258 VDWAIGNETCDKARRKVDTYACVSHNSKCFNSSNGPGYICNCSEGYQGNPYLQDGQHGCT 317
Query: 188 DCDEWGSTNYQCDMSGQC 241
D DE Y C + G C
Sbjct: 318 DIDECADPKYPCSVPGTC 335
>12_02_0700 +
22259921-22260207,22264678-22264750,22265062-22265802,
22265849-22266424,22266505-22266957
Length = 709
Score = 26.6 bits (56), Expect = 5.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 90 PATVIVNQALMASIVTGAGRIITVSQWKAAR---IATAMSGDRQTTSATCLDNVPARKTS 260
P + V +AL + VT ++I+ A R IA + D T+ T + A
Sbjct: 626 PEEIEVQEALASLCVTVCDKLISTDPVLADRFDKIAADVCLDSSITANTTANTAFAALVK 685
Query: 261 RAGDVTDVWKIQSV 302
AG+V + K QS+
Sbjct: 686 EAGEVVEKRKAQSI 699
>11_04_0142 + 14027726-14029081
Length = 451
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = -1
Query: 320 IPVRQADALYFPYICHI-ACPRRFPGRNIVQTCRTGSLSIPTHRSRNPCSLPLRNRNDTP 144
+ V A PY+C + C R FP + G H++R+ + + +
Sbjct: 210 VVVEGAPQKSLPYMCKMQGCGRAFPTHQGLGGHAAG------HQNRSKAAAAAASEQGSS 263
Query: 143 GTGHNGCH 120
G G +GCH
Sbjct: 264 GAGADGCH 271
>11_04_0138 - 13931937-13932835,13933457-13933460
Length = 300
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 176 CKDCDCDEWGSTNYQCDM 229
CK C D+ G+ Y CDM
Sbjct: 214 CKPCGGDQLGTARYVCDM 231
>10_06_0184 -
11577331-11577360,11577616-11577722,11578048-11578126,
11578213-11578299,11580935-11581207,11581298-11581447,
11582186-11582785
Length = 441
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 157 VMIRPAPVTMDAINAWFTITVAGLR 83
V + P+P+T + I+ WFT VAG R
Sbjct: 211 VSMEPSPLT-EKIHGWFTGLVAGFR 234
>07_03_1516 + 27367518-27368552,27368828-27369097,27369616-27370062
Length = 583
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 164 SVEGCKDCDCDEWGSTNYQCDM--SGQCSCQENVEGRR 271
+ E C+DC +WG+TN + G E+ G R
Sbjct: 340 AAEECQDCHKKQWGTTNGPSKVITEGAAKADEHWRGNR 377
>03_05_0039 - 20125473-20126222
Length = 249
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 227 MSGQCSCQENVEGRRCDRCMENTKRRLDGQGC 322
+ G C +++ G C C+E+ +L +GC
Sbjct: 194 LHGMAQCTKDLSGGDCKMCLESAIDQLLARGC 225
>03_02_0275 +
7042433-7042732,7042864-7043140,7043751-7044231,
7044943-7045491,7045556-7045680,7045824-7045966
Length = 624
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Frame = +2
Query: 83 PQTGHCYCKPGIDG-IHCD-RC---RAYHYGFSVEGCKDCDCDEWGSTNYQCDMSGQCSC 247
P T HC + G IHC+ C R + + S E C C W +C +
Sbjct: 260 PSTPHCGNAIRVKGDIHCEVECTCGRQFCFNCSSEAHSPCSCVMWELWIKKCRDESETVN 319
Query: 248 QENVEGRRCDRC 283
V + C +C
Sbjct: 320 WITVNTKPCPKC 331
>02_04_0538 +
23739830-23740126,23740205-23740261,23740344-23740441,
23740565-23740640,23741316-23741345,23741833-23741961,
23742077-23742123,23742477-23742531,23742939-23743038,
23743568-23743674,23743760-23743906,23744232-23744378,
23744473-23744526,23744873-23744914
Length = 461
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/45 (22%), Positives = 24/45 (53%)
Frame = +3
Query: 12 ISTQETVAKLAIVTWRDRTIAHAIRKPATVIVNQALMASIVTGAG 146
++++ K+ +V WR + I++ ++N A+ + TG+G
Sbjct: 241 LTSERLFTKVILVLWRGLSCTMGIKRSQHSLINPAITIFLRTGSG 285
>01_06_0170 +
27178952-27179572,27181631-27181816,27182245-27182274,
27183323-27183518,27183623-27183714,27183753-27183773,
27184216-27184248
Length = 392
Score = 26.6 bits (56), Expect = 5.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3
Query: 72 AHAIRKPATVIVNQALMASIVTGAGRIITVSQWKAARIATAMSGDRQTTSATCLDNVPAR 251
A A P V+V A A I R+ V + AAR +++G + A C + A
Sbjct: 49 APAAAAPPIVVVGSA-NADIYVEVDRLPLVGETVAARAGRSLAGGKGANQAACGGRLAAG 107
Query: 252 KT---SRAGD 272
T +R GD
Sbjct: 108 PTYLVARVGD 117
>12_01_0427 +
3359766-3360092,3360425-3360541,3360738-3360893,
3361009-3361144,3361303-3361436,3361832-3361987,
3362496-3362594,3362817-3362932,3363358-3363532,
3363807-3363885,3363989-3364132,3364206-3364319,
3364415-3364536,3364929-3365011,3365091-3365188,
3365300-3365420,3366237-3366333,3366782-3366874,
3366948-3367053,3367395-3367540,3367617-3367697,
3367838-3367921,3367997-3368132,3368334-3368400,
3368943-3369102
Length = 1048
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 213 TTSATCLDNVPARKTSRAGDVTDVWKIQSVGLTDRDATI 329
TTS+ CLD++ RK + DV + GLTDR I
Sbjct: 424 TTSSFCLDDLAWRKLEK-----DVQSLLQQGLTDRTKMI 457
>11_08_0066 - 28131521-28132012
Length = 163
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -1
Query: 311 RQADALYFPYICHIACPRRFPGRNIVQTCRTGSLSIPTHRSRNPCSLPLRNRNDTPGTG 135
R +A + C C RRFP + RT L T++ R S PL + + G G
Sbjct: 62 RDEEAAAAAFECR-TCGRRFPSHQALGGHRTSHLRPTTNKRRPGPSKPLIHACEVCGLG 119
>10_03_0035 -
7265037-7265455,7265684-7265812,7265909-7265951,
7266321-7266344
Length = 204
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 41 CDCNLEGSYNSSCHPQTGHCYCKPGIDGIHC 133
C C+ G Y C CYC P I G C
Sbjct: 158 CRCHCGGGYGCRCCGAAPPCYCVP-IGGGGC 187
>09_02_0610 -
11206198-11206588,11206812-11207001,11207116-11207184,
11207546-11207672,11207809-11208128,11208196-11208353,
11208503-11208580,11209484-11209555,11209994-11210135,
11212580-11213064,11214362-11214947,11215093-11215177
Length = 900
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 5 EDNIDSGDGCKACDCNLEGSYNSSCHPQTGHCYC--KPGID 121
+D I G + DC E +Y+ P+TG Y +P ID
Sbjct: 21 DDGIGGQSGFVSIDCGREANYSDYKDPKTGIVYVSDEPYID 61
>01_06_1097 +
34507376-34507395,34509380-34511214,34511263-34511598,
34511800-34513691
Length = 1360
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -1
Query: 275 HIACPRRFP---GRNIVQTCRTGSLSIPTHRSRNPCSLPLRNRND 150
HI+ PRR P + + GS H +NP LPL ND
Sbjct: 506 HISVPRRNPFDLPYDSEEAAIPGSAPSVLHTRKNPFDLPLDQSND 550
>01_05_0552 - 23173106-23173184,23173266-23173411,23173543-23174022,
23174106-23174161,23175538-23175637,23175708-23175765,
23176163-23176278,23176915-23176974,23177297-23177383,
23178250-23178341,23178409-23178587,23178946-23179087,
23179655-23179706,23180241-23180473,23180569-23180745,
23180882-23181044,23181242-23181392,23181493-23181574,
23182193-23182332,23182499-23183013
Length = 1035
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +3
Query: 21 QETVAKLAIVTWRDRTIAHAIRKPATVIVNQALMASIVTGAGRIITVSQWKAARIATAMS 200
QET++ LA+ T + P T N A I +++ ++ S
Sbjct: 795 QETISALAVTTANENQRTALSVNPTTKRSNYIKFAQITPANRSTLSMKHGCSSTSQLLYS 854
Query: 201 GDRQTTSATCLD 236
GD+ +T A +D
Sbjct: 855 GDKLSTDAQVID 866
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 113 GIDGIHCDRCRAYHYGFS--VEGCKDCDCDEWGSTNYQCDMSGQCSCQENVEGRRCD 277
G+ I C RC+AY F ++ K C+ G +N D + C +GRR D
Sbjct: 424 GMGPIRCSRCKAYINPFMRFIDQGKHFVCNLCGFSN---DTPREYLCNLGPDGRRRD 477
>11_01_0483 - 3718104-3718802,3718817-3719308
Length = 396
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Frame = +2
Query: 185 CDCDEWGSTNYQCDMSGQCSCQENVEGRRCDR-----CMENTKRRLDGQGCDD 328
C D G+ D+S +C C + CDR + R+DG G DD
Sbjct: 313 CAIDGGGAALKFVDISSRCCCGSLGKHTTCDRSSRAFVIRTWTLRIDGDGDDD 365
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 158 GFSVEGCKDCDCDEWGSTNYQCDMSGQCSCQENVEG 265
G+ V C+ C+C G NY M C+ ++ G
Sbjct: 92 GYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHG 127
>09_02_0498 + 9910165-9910212,9910238-9910732
Length = 180
Score = 25.8 bits (54), Expect = 8.9
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = -1
Query: 263 PRRFPGRNIVQTCRTGSLSIPTHRSRNP---CSLPLRNRNDTPGTGHNGCHQCLVYNNSG 93
P + I++T + +LS PT +R P C RN + TP T H+ Y G
Sbjct: 30 PWYYGSHGIIKTPKRFNLS-PTLSTRFPLLPCRFRTRNLSSTPSTAKQTAHRRTQYLAGG 88
Query: 92 RFADGMSYCTIPPSYNRKLCNRLLSRY 12
+ ++Y + + K RL RY
Sbjct: 89 AHS-RINYSEQECAIDSKELARLHMRY 114
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = -1
Query: 146 PGTGHNGCHQCLVYNNSGRFADGMSYCTIPPSYNRKLCNRLLSRY 12
P TG C C GRF M P + C+R +S Y
Sbjct: 171 PSTGLRVCAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEY 215
>03_03_0217 + 15500943-15502196
Length = 417
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 316 LSVKPTLC-IFHTSVTSPALDVFLAGTLSRHVALVVCRSPLIAVAILAAFH 167
L + P C +FH + +DV+LA HV VCR+ L A+ AA H
Sbjct: 166 LRLLPGCCHVFHAA----CIDVWLAA----HVTCPVCRADLADPAVAAAGH 208
>02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704
Length = 748
Score = 25.8 bits (54), Expect = 8.9
Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Frame = +2
Query: 29 GCKACDCNLEGSYNSSCHPQTGHCYCKPGIDGIHCDRCRAYHYG--FSVEGCKDCDCDEW 202
G K C + C + C G C+ C A G + ++GC+D + E
Sbjct: 247 GKKTCREARRNATGYMCVSRDSECVDSRNGPGYLCN-CSAGFEGNPYLLDGCQDINECED 305
Query: 203 GSTNYQCDMSGQCSCQENVEGRRCDRCMENT 295
Y C + G +C G RC C + T
Sbjct: 306 SRFKYPCSVPG--TCINTPGGFRCS-CPDKT 333
>02_05_0004 - 24880826-24882033,24882106-24882276,24882360-24883203
Length = 740
Score = 25.8 bits (54), Expect = 8.9
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = +2
Query: 14 IDSGDGCKACDCNLEGSYNSSCHPQTGHCY-CKPGIDGIHCDRCRAYHYG--FSVEGCKD 184
+D G K C+ + +C C + G + C A + G + ++GC+D
Sbjct: 223 LDWAIGNKTCEEAKRNASAYACVSANSECVDSRYGRGRGYLCNCSAGYDGNPYLLDGCQD 282
Query: 185 C-DCDEWGSTNYQCDMSGQC 241
+CDE Y C + G C
Sbjct: 283 INECDE-SRFRYPCSVPGTC 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,547,184
Number of Sequences: 37544
Number of extensions: 267087
Number of successful extensions: 866
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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