Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H17
(341 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 29 0.016
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 27 0.047
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.19
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.33
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 1.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 1.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 1.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 1.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 3.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 3.1
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 5.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 5.4
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 20 9.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 9.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 20 9.5
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 29.1 bits (62), Expect = 0.016
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 131 CDRCRAYHYGFSVEGCKDCDCDEW 202
CD+C Y Y + C DC +W
Sbjct: 560 CDQCEEYEYVYDEYTCMDCGPGKW 583
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 27.5 bits (58), Expect = 0.047
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 131 CDRCRAYHYGFSVEGCKDCDCDEW 202
CD+C Y Y C DC +W
Sbjct: 470 CDQCEEYEYVHDEYTCMDCGPGKW 493
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.4 bits (53), Expect = 0.19
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 53 LEGSYNSSCHPQTGHCYCK-PGIDGIHCDRCRAY 151
L+ S N HP GH CK PG + I C+ +A+
Sbjct: 266 LDVSSNDKVHPLYGHGVCKWPGCEVI-CEDYQAF 298
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 24.6 bits (51), Expect = 0.33
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 10/56 (17%)
Frame = +2
Query: 89 TGHCYCKPG----IDGIHCDRC--RAYHYGFSVEGCKDCDC----DEWGSTNYQCD 226
+G C+CKPG ++ C C + + C+ C ++G T +CD
Sbjct: 244 SGGCHCKPGYQADVEKQECTECPIGKFKHEAGSHSCEACPAHSKSSDYGFTECRCD 299
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 1.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 248 GRNIVQTCRTGSLSIPTHRSRNPCSLPLRNR 156
G N + TC + TH + N C+ LR +
Sbjct: 420 GPNEIVTCTNCGPNPCTHTTTNGCTAELRKK 450
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 1.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 248 GRNIVQTCRTGSLSIPTHRSRNPCSLPLRNR 156
G N + TC + TH + N C+ LR +
Sbjct: 406 GPNEIVTCTNCGPNPCTHTTTNGCTAELRKK 436
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 1.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 248 GRNIVQTCRTGSLSIPTHRSRNPCSLPLRNR 156
G N + TC + TH + N C+ LR +
Sbjct: 440 GPNEIVTCTNCGPNPCTHTTTNGCTAELRKK 470
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 1.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 248 GRNIVQTCRTGSLSIPTHRSRNPCSLPLRNR 156
G N + TC + TH + N C+ LR +
Sbjct: 389 GPNEIVTCTNCGPNPCTHTTTNGCTAELRKK 419
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 3.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 89 FADGMSYCTIPPSYNRKLCNRLLSRY 12
+ D S PPSYN+ N + R+
Sbjct: 529 YYDSKSSTETPPSYNQLNYNENIERF 554
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 3.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 234 DNVPARKTSRAGDVTDVWKIQSVGLTDRD 320
D ++ SR G T +W+ L DR+
Sbjct: 444 DGAAVKRKSREGSTTYLWEFLLKLLQDRE 472
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 135 SQWMPSMPGLQ*QW 94
+ WMPS+ G QW
Sbjct: 474 NSWMPSIRGAIQQW 487
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1
Query: 242 NIVQTCRTGSLSIPTH 195
N+V C G +PTH
Sbjct: 803 NVVFVCHNGMNWMPTH 818
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 20.6 bits (41), Expect = 5.4
Identities = 6/23 (26%), Positives = 11/23 (47%)
Frame = +3
Query: 261 RAGDVTDVWKIQSVGLTDRDATI 329
R G + W + S +D D ++
Sbjct: 208 RKGSIARCWSLDSTAASDEDISL 230
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 239 CSCQENVEGRR 271
C Q+NVEG+R
Sbjct: 248 CVGQQNVEGKR 258
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.8 bits (39), Expect = 9.5
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 90 VCGWHELLYDPSKLQSQALQPSPESI 13
V G E+LYD + L + SPE +
Sbjct: 174 VGGKCEVLYDIAPLSDFVIHRSPELV 199
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 328 IVASLSVKPTLCIFHTSVTSPA 263
I+ +LS+ T+C+ + SP+
Sbjct: 321 ILVTLSIWITVCVLNVHFRSPS 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,833
Number of Sequences: 438
Number of extensions: 2406
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7839909
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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