Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H14
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 44 1e-04
03_02_0485 - 8808139-8808618 43 2e-04
03_02_0484 + 8805053-8805538 43 2e-04
03_02_0483 - 8804021-8804485 42 2e-04
01_01_0227 + 1933247-1933699 41 7e-04
03_02_0478 + 8775892-8776377 40 0.001
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 40 0.002
01_01_0229 - 1943473-1943922 39 0.002
01_01_0231 + 1951047-1951499 39 0.003
12_02_1174 - 26696869-26698191 38 0.004
03_05_0543 - 25404630-25405408,25405461-25405605 38 0.004
11_02_0041 - 7669692-7670312 38 0.007
02_02_0077 - 6586638-6587165 37 0.012
01_01_0599 - 4448290-4448790 34 0.081
01_05_0519 - 22897277-22897986,22898126-22898225 33 0.19
02_05_0972 + 33198035-33198277,33198366-33198641 32 0.33
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634... 31 0.43
07_01_1032 - 8947594-8947769,8947885-8948601,8948973-8949049,894... 31 0.76
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750... 31 0.76
01_05_0515 - 22884642-22885160 30 1.3
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 29 2.3
02_05_0494 + 29486960-29487454 29 3.1
01_06_1733 + 39537618-39537722,39537865-39538028,39539796-395401... 29 3.1
01_07_0105 - 41104655-41104851,41105818-41107150 28 4.0
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 5.3
06_03_0073 + 16229369-16230115,16230182-16230431,16230618-162307... 28 5.3
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 28 5.3
11_08_0036 + 27850822-27850920,27851773-27851949,27852040-278522... 27 7.1
09_03_0127 + 12573429-12574857,12575269-12575903 27 7.1
05_05_0237 - 23526613-23527178,23527979-23528066,23528384-235285... 27 7.1
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167... 27 9.3
11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172... 27 9.3
05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429 27 9.3
01_06_0486 - 29729333-29729356,29729856-29730106,29730364-297304... 27 9.3
>10_08_0141 + 15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +1
Query: 235 DVQHFAPEEISVKTVDGF--IVIEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDAVQSRL 408
D+Q + E I V+ V +V+ + + W +F ++ +P+GCD+ A+Q+RL
Sbjct: 941 DIQGYKKEHIKVQLVRSRRRLVVSGECPVAGETNRW--SRFRLQFPVPDGCDLKAIQARL 998
Query: 409 SSDGVLSITVPLERPQ 456
DGV+ +T+P +PQ
Sbjct: 999 -HDGVIRVTLPGVKPQ 1013
>03_02_0485 - 8808139-8808618
Length = 159
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Frame = +1
Query: 235 DVQHFAPEEISVKTVDGFIVI-----EANHEEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
DV EE+ V+ DG I+ EEK D+ V R KF RR++LPE +
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 391 AVQSRLSSDGVLSITVPLERPQ 456
+++ + + GVL++TVP E P+
Sbjct: 128 QIKASMEN-GVLTVTVPKEEPK 148
>03_02_0484 + 8805053-8805538
Length = 161
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Frame = +1
Query: 235 DVQHFAPEEISVKTVDGFIVI-----EANHEEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
DV EE+ V+ DG ++ EEK D+ V R KF RR++LPE +
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 391 AVQSRLSSDGVLSITVPLERPQ 456
+++ + + GVL++TVP E P+
Sbjct: 130 QIKASMEN-GVLTVTVPKEEPK 150
>03_02_0483 - 8804021-8804485
Length = 154
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 235 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
DV EE+ V+ DG ++ + EEK D+ V R KF RR++LPE +
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 391 AVQSRLSSDGVLSITVPLERPQ 456
+++ + + GVL++TVP E P+
Sbjct: 123 QIKASMEN-GVLTVTVPKEEPK 143
>01_01_0227 + 1933247-1933699
Length = 150
Score = 40.7 bits (91), Expect = 7e-04
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 295 IEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDAVQSRLSSDGVLSITVPLERPQTAE-RI 471
++ ++E+ S KF RR++LP G VD V + + +GVL++TVP E + + +
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 472 VPI 480
+PI
Sbjct: 146 IPI 148
>03_02_0478 + 8775892-8776377
Length = 161
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Frame = +1
Query: 235 DVQHFAPEEISVKTVDGFIVI---EAN--HEEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
DV EE+ V+ DG I+ E N EEK D+ V R KF RR++LP+ +
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 391 AVQSRLSSDGVLSITVPLE 447
+++ + +GVL++TVP E
Sbjct: 130 QIKASM-ENGVLTVTVPKE 147
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Frame = +1
Query: 235 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
D+ EE+ V+ +G +++ + E+K D+ V R +F RR++LPE VD
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 391 AVQSRLSSDGVLSITVP 441
V++ L +GVL++TVP
Sbjct: 119 QVKAGL-ENGVLTVTVP 134
>01_01_0229 - 1943473-1943922
Length = 149
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Frame = +1
Query: 235 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
D+ EE+ V+ +G +++ + E+K D+ V R +F RR++LPE VD
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 391 AVQSRLSSDGVLSITVP 441
V++ + +GVL++TVP
Sbjct: 118 QVKASM-ENGVLTVTVP 133
>01_01_0231 + 1951047-1951499
Length = 150
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Frame = +1
Query: 235 DVQHFAPEEISVKTVDGFIVIEANH-----EEKMDEHGWVSR---KFSRRYQLPEGCDVD 390
D+ EE+ V+ +G +++ + E+K D+ V R +F RR++LPE VD
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 391 AVQSRLSSDGVLSITVP 441
V++ + +GVL++TVP
Sbjct: 119 QVKAGM-ENGVLTVTVP 134
>12_02_1174 - 26696869-26698191
Length = 440
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +1
Query: 202 KADKSKFQVNLDVQHFAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEGC 381
+A + + V + + F E++ V+ VD ++ A E G +F + +LP+ C
Sbjct: 18 QAGEEQDVVEIALPGFRKEQVRVQ-VDNHGMLRATGERPPAARGGRWVRFKKDLRLPDNC 76
Query: 382 DVDAVQSRLSSDGVLSITVPL 444
D DAV++R D L IT+PL
Sbjct: 77 DADAVRARF-DDHKLIITLPL 96
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 214 SKFQVNLDVQHFAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDA 393
+ ++LD F EEI V VD + E + + W +F + +QLP C+VD
Sbjct: 39 NSIHLSLDQLGFKREEIRV-LVDNHGHLRTRGERPVAGNRW--SRFQKDFQLPADCNVDG 95
Query: 394 VQSRLSSDGVLSITVPLERP 453
++++ ++ L+IT+P + P
Sbjct: 96 IRAKFENE-ALTITLPKKTP 114
>11_02_0041 - 7669692-7670312
Length = 206
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +1
Query: 346 KFSRRYQLPEGCDVDAVQSRLSSDGVLSITVP 441
+F RR+++P G DV V +RL DGVL++TVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARL-DDGVLTVTVP 171
>02_02_0077 - 6586638-6587165
Length = 175
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 346 KFSRRYQLPEGCDVDAVQSRLSSDGVLSITVPLERP 453
KF RR+ LPE D+D V++ DGVL++TV + P
Sbjct: 117 KFMRRFPLPESADLDGVRAEY-KDGVLTVTVDKKPP 151
>01_01_0599 - 4448290-4448790
Length = 166
Score = 33.9 bits (74), Expect = 0.081
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 346 KFSRRYQLPEGCDVDAVQSRLSSDGVLSITV 438
KF R++ LP+ DVD + S + DGVL++TV
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTV 147
>01_05_0519 - 22897277-22897986,22898126-22898225
Length = 269
Score = 32.7 bits (71), Expect = 0.19
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +1
Query: 220 FQVNLDVQHFAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDAVQ 399
+ + ++V F EE+ V V A +HG + + ++ +QLP C++DA+
Sbjct: 26 YLLRVNVPEFKKEELQVH------VDPAGRLTVRGQHGGL--RLNKVFQLPPTCNLDAIT 77
Query: 400 SRLSSDGVLSITVPLERPQTA 462
RL + VL +TVP + TA
Sbjct: 78 GRLEA-SVLVLTVPKKPATTA 97
>02_05_0972 + 33198035-33198277,33198366-33198641
Length = 172
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 343 RKFSRRYQLPEGCDVDAVQSRLSSDGVLSITVPLERP 453
R F+R+++LPE D + +R +GVL++TV P
Sbjct: 124 RAFARKFRLPEDADTGGISAR-CENGVLTVTVKKRPP 159
>12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403,
17466161-17466346
Length = 1831
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 185 SWRRFESCFQGP*NFLDGCGLTRLRTSSGVRARANCLLFRSLGRSISRRYG 33
SW+ S P NF+ L ++T++G R NCLLF S+ R G
Sbjct: 1360 SWKMLGSAL--PDNFMSSINLRWVKTTAGYRHPKNCLLFGPACSSLHRDDG 1408
>07_01_1032 -
8947594-8947769,8947885-8948601,8948973-8949049,
8949264-8949655,8949746-8950002,8950234-8950921
Length = 768
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 190 GSTIKADKSKFQVN-LDVQHFAPEEISVKTVDGFIVIEA 303
G +K + ++F N + +Q F E ISV VDGF+ I A
Sbjct: 407 GELVKWNATRFGTNCMFLQSFLKEAISVHAVDGFLYIHA 445
>03_06_0443 +
33973229-33973311,33973422-33973510,33974873-33975024,
33975463-33975579,33975729-33975776,33976169-33976312,
33976715-33976858
Length = 258
Score = 30.7 bits (66), Expect = 0.76
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = -3
Query: 318 LLFMISLNDDKSVNGFHGDLLWSEVLHIKIDLKLALVGFDGRARVVEEVRELFPRPIELF 139
LL + +++DK + G G S+ LHI I+ + D R R +EV E +P+
Sbjct: 156 LLVALLISEDK-LRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPV--- 211
Query: 138 RRLRTDET*DFFGRQSEGELLVV 70
DE+ DF+ RQ EL ++
Sbjct: 212 -----DESQDFYKRQQLRELAML 229
>01_05_0515 - 22884642-22885160
Length = 172
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/98 (28%), Positives = 42/98 (42%)
Frame = +1
Query: 220 FQVNLDVQHFAPEEISVKTVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDAVQ 399
+ LD+ F EE V+ VDG + + G V + R +QLP DVD +
Sbjct: 40 YVARLDLAGFRKEEFRVQ-VDGAGRVTVRGQRPA---GHV--RLHREFQLPPAADVDRIA 93
Query: 400 SRLSSDGVLSITVPLERPQTAERIVPIIQTGPVKTQAE 513
+R L +TVP +RP V + + +AE
Sbjct: 94 ARFDG-ATLCLTVP-KRPAGGAAEVVMATMEDARVEAE 129
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +1
Query: 142 KFYGPW----KQLSNLLHDSGSTIKADKSKFQVNLD-VQHFAPEEISVK 273
+FY PW K+L+ +L ++ +T+K+DK +D + P E V+
Sbjct: 408 EFYAPWCGHCKKLAPILDEAATTLKSDKDVVIAKMDATANDVPSEFDVQ 456
>02_05_0494 + 29486960-29487454
Length = 164
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 358 RYQLPEGCDVDAVQSRLSSDGVLSITVP 441
+++LPE D +R++ DGVL++TVP
Sbjct: 111 QFRLPEDAAADEASARMA-DGVLTVTVP 137
>01_06_1733 +
39537618-39537722,39537865-39538028,39539796-39540102,
39540914-39541221,39541421-39541580
Length = 347
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 362 TSCLKVVMSTLSSRGCLRTECCQSQCHWSVLKLPSALC 475
T+C + + C RT C + Q W +L+L +ALC
Sbjct: 245 TACRGLQLLIRHFSRCHRTSCPRCQRMWQLLRLHAALC 282
>01_07_0105 - 41104655-41104851,41105818-41107150
Length = 509
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +1
Query: 103 EEVLSLVSPQPSKKFYGPWKQLSNLLHDSGSTIKADKSKFQVNLDVQHFAPEEISVKTVD 282
EEV L P SK G + ++ + D K + S N++ + EEI V+ +
Sbjct: 331 EEVAQLEQPSSSKSNNGEMEAVAGV--DQAEDAKKETS----NIEAINVEQEEIKVEEEE 384
Query: 283 GFIVIEANHEEKMDEHGWVSR 345
I++ EE+ ++ +SR
Sbjct: 385 EKIIVSQETEEEEEKSAVISR 405
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 275 PLTDLSSLRLIMKRRWMSTDGC 340
PL+DL S RL +R + S DGC
Sbjct: 327 PLSDLDSQRLFFRRIFGSDDGC 348
>06_03_0073 +
16229369-16230115,16230182-16230431,16230618-16230728,
16230768-16231153
Length = 497
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 143 FLDGCGLTRLRTSSGVRARANCLLFRSLGRSISRRYGNRDIFTLWPR 3
FL+ C + ++ S R LF LGR+ Y NR W +
Sbjct: 107 FLETCSMYTIKGVSPDAVRLRLFLFSLLGRAKQWFYANRAAINTWDK 153
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 274 TVDGFIVIEANHEEKMDEHGWVSRKFSRRYQLPEGCDVDAVQSRLSS 414
++DG + + + E+ E G S+KFS+ + E D S+LSS
Sbjct: 51 SMDGVLYCKTHFEQLFKETGSFSKKFSQGGKSSEKSDQGRAPSKLSS 97
>11_08_0036 +
27850822-27850920,27851773-27851949,27852040-27852282,
27852397-27852448,27852560-27852674,27852749-27852830,
27853023-27853118,27853212-27853313,27853397-27853513,
27853631-27853747,27853933-27854004
Length = 423
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 415 DGVLSITVPLERPQTAERIVPIIQTGPVKTQAE 513
D V +I +P E+P T + P+I T P++ + +
Sbjct: 145 DKVKTIFLPTEKPMTPDACAPLIATLPLEARGK 177
>09_03_0127 + 12573429-12574857,12575269-12575903
Length = 687
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = -3
Query: 375 FRQLVSP*KLSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEVLHIKIDLKLALVGFDG 196
FR+ + +RHP+VL L F ++ + V F G +++LH I+ + +
Sbjct: 431 FRRRMERVGKARHPAVLPPLAFYCAMQEKLVVYEFLGHGSLAKLLHGSIESSQVALDWPA 490
Query: 195 RARVVEEVRE 166
R + +V +
Sbjct: 491 RLHIASKVAD 500
>05_05_0237 -
23526613-23527178,23527979-23528066,23528384-23528527,
23528674-23528790,23528860-23528970,23530911-23531062,
23531362-23531450,23531664-23531761
Length = 454
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = -3
Query: 297 NDDKSVNGFHGDLLWSEVLHIKIDLKLALVGFDGRARVVEEVRELFPRPIELFRRLRTDE 118
N ++ + G G + LHI I+ +L D R +E+ E +P+ DE
Sbjct: 188 NKEEQLKGRAGYEHLDDPLHILIEAELPANVIDARLAKAQEILEELLKPV--------DE 239
Query: 117 T*DFFGRQSEGELLVV*EP 61
+ D++ RQ EL ++ P
Sbjct: 240 SQDYYKRQQLRELALLNSP 258
>12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,
1676103-1676206,1676321-1676479,1676768-1676894,
1677569-1677736,1677890-1678000,1678090-1678243,
1678409-1678744,1678854-1679038,1679141-1679239,
1679376-1679639,1679776-1679952,1680351-1680644,
1680753-1680920,1681574-1681918,1682002-1682171,
1682272-1682422,1683296-1683365,1683456-1683640,
1683999-1684092,1684195-1684313,1684658-1684717,
1684844-1684930,1685631-1685717,1685905-1686013,
1686105-1686183,1686350-1686437,1686611-1686675,
1687570-1687722,1688514-1688620,1688702-1688784,
1688926-1689016,1689095-1689231,1689612-1689701,
1689795-1689962,1690366-1690560
Length = 1809
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -3
Query: 348 LSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEV 244
LS + +V++ ++F +DDK + +G+ LW ++
Sbjct: 1404 LSGYNAVVLPVIFASRFDDDKDIGALYGE-LWEDI 1437
>11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,
1721996-1722099,1722214-1722372,1722668-1722794,
1723469-1723636,1723789-1723899,1723989-1724142,
1724308-1724643,1724753-1724937,1725040-1725138,
1725275-1725538,1725674-1725850,1726249-1726542,
1726649-1726816,1727473-1727817,1727901-1728070,
1728171-1728321,1729193-1729262,1729353-1729537,
1729896-1729989,1730094-1730212,1730558-1730617,
1730744-1730830,1732348-1732434,1732622-1732730,
1732822-1732900,1733067-1733154,1733328-1733392,
1734287-1734439,1735231-1735337,1735419-1735501,
1735643-1735733,1735812-1735948,1736118-1736207,
1736301-1736468,1736875-1737057
Length = 1805
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -3
Query: 348 LSRHPSVLIHLLFMISLNDDKSVNGFHGDLLWSEV 244
LS + +V++ ++F +DDK + +G+ LW ++
Sbjct: 1400 LSGYNAVVLPVIFASRFDDDKDIGALYGE-LWEDI 1433
>05_06_0037 + 25095452-25096049,25097093-25097280,25097926-25098429
Length = 429
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 39 SPRDGTP*AP-KQQAIRPRSDARRSPK---SRQSATV*KVLWALETALEPPP 182
SP +P P +A +P + +RR K S + T+ + LW + + L PPP
Sbjct: 35 SPEGSSPRDPDSDEAEQPDTPSRRGVKDDISELTETLTRRLWGVASFLAPPP 86
>01_06_0486 -
29729333-29729356,29729856-29730106,29730364-29730466,
29730571-29730663,29730773-29730905,29731184-29731272,
29731385-29731553,29731930-29732016,29732388-29732506,
29732554-29732706
Length = 406
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 310 EEKMDEHGWVSRKFSRRYQLPEGCDVDAVQSRLSSDGVLSITVPLERPQTAERIVPIIQT 489
+E +DE W + S ++ E +VD ++ ++++ T P P+ A +I +++
Sbjct: 192 QESIDEQPWEKVRSSSPLKVKEDDEVDKLEIKINTSKRSRRTYPSPSPEVALKISRSLRS 251
Query: 490 GPVKT 504
KT
Sbjct: 252 LNAKT 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,174,692
Number of Sequences: 37544
Number of extensions: 317831
Number of successful extensions: 1134
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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