Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_H14
         (527 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.8  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 416 TECCQSQCHWSVLKLPSALCPSSK 487
           ++C Q+  H+S  +  S LCP+ +
Sbjct: 363 SKCSQTSVHYSNGQTHSQLCPTPR 386


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 289 IVIEANHEEKMDEHGWVSRKFSRRYQL 369
           +V   NH+ + D    ++ K+S+RY++
Sbjct: 302 LVFVDNHDTQRDNPQILTYKYSKRYKM 328


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 446  SNGTVIDNTPSEDSRDWTASTSQPSGN 366
            S   ++ N  S+D  D+T       GN
Sbjct: 1366 SGELMLSNLQSQDGGDYTCQVENAQGN 1392


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 446  SNGTVIDNTPSEDSRDWTASTSQPSGN 366
            S   ++ N  S+D  D+T       GN
Sbjct: 1362 SGELMLSNLQSQDGGDYTCQVENAQGN 1388


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -1

Query: 362 YLLENFRDTHPCSSIFSS*LASMTINPSTVFTEISSGAKC 243
           YL E+ R   PC+S +        ++P++         KC
Sbjct: 71  YLAESSRSIDPCASKYCGIGKECELSPNSTIAVCVCMRKC 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.131    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,851
Number of Sequences: 438
Number of extensions: 3150
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)