Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_H12
         (457 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061047-1|AAL28595.1|  316|Drosophila melanogaster LD01482p pro...    69   2e-12
AE014297-563|AAF54060.1|  316|Drosophila melanogaster CG10068-PA...    69   2e-12

>AY061047-1|AAL28595.1|  316|Drosophila melanogaster LD01482p
           protein.
          Length = 316

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = +2

Query: 104 YLRPFIKWFLRKTTRLCELERICYGDKPGAHRTCNVEKSLMFSRTKDVIEVVSFLDNMVF 283
           Y+RPFIKWFL   TRL EL+RICYG K GA RT  VE+SL  S+   +  +V  LD    
Sbjct: 14  YIRPFIKWFLHAFTRLSELQRICYGAKAGASRTSQVERSLTLSKRPQIRRLVLDLDEAA- 72

Query: 284 ERRFVPQ-NFHNIIDSGVAIIVRTKKINLQLHRTFVVSF 397
              +V      +       I+++ K+I   +H  F   F
Sbjct: 73  --PYVSNAELLDFAPRAARIVMQAKRIKNNVHPDFARLF 109


>AE014297-563|AAF54060.1|  316|Drosophila melanogaster CG10068-PA
           protein.
          Length = 316

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
 Frame = +2

Query: 104 YLRPFIKWFLRKTTRLCELERICYGDKPGAHRTCNVEKSLMFSRTKDVIEVVSFLDNMVF 283
           Y+RPFIKWFL   TRL EL+RICYG K GA RT  VE+SL  S+   +  +V  LD    
Sbjct: 14  YIRPFIKWFLHAFTRLSELQRICYGAKAGASRTSQVERSLTLSKRPQIRRLVLDLDEAA- 72

Query: 284 ERRFVPQ-NFHNIIDSGVAIIVRTKKINLQLHRTFVVSF 397
              +V      +       I+++ K+I   +H  F   F
Sbjct: 73  --PYVSNAELLDFAPRAARIVMQAKRIKNNVHPDFARLF 109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,040,392
Number of Sequences: 53049
Number of extensions: 420886
Number of successful extensions: 898
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)