Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H11
(549 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 231 7e-62
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 222 2e-59
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 118 8e-28
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 103 2e-23
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.048
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.15
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 30 0.26
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 29 0.60
SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces po... 28 0.79
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 1.0
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 27 1.4
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 27 1.8
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 3.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 3.2
SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces po... 26 4.2
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.6
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 7.3
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 7.3
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 25 9.7
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 9.7
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 231 bits (564), Expect = 7e-62
Identities = 100/150 (66%), Positives = 118/150 (78%)
Frame = +1
Query: 100 SVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRA 279
S+HVGQAG QIGNACWELYCLEHGIQP+G M + D F+TFFSETG GK+VPR+
Sbjct: 6 SIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRS 65
Query: 280 VFVDLEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 459
++VDLEP V+D VRTG YR LFHPEQLITGKEDA+NNYARGHYT+GKE+VD V D+IR++
Sbjct: 66 IYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRI 125
Query: 460 ADQCTGLQGFLIFHXXXXXXXXXXXXLLME 549
AD C+GLQGFL+FH LL+E
Sbjct: 126 ADNCSGLQGFLVFHSFGGGTGSGFGALLLE 155
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 222 bits (543), Expect = 2e-59
Identities = 101/155 (65%), Positives = 120/155 (77%), Gaps = 5/155 (3%)
Frame = +1
Query: 100 SVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD-----KTIGGGDDSFNTFFSETGAGK 264
SVHVGQAGVQIGNACWELYCLEHGI PDG PT+ K +D F TFFSETG GK
Sbjct: 6 SVHVGQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSETGQGK 64
Query: 265 HVPRAVFVDLEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 444
VPR+++VDLEP V+D VRTG Y+ LFHPEQ++TGKEDA+NNYARGHYT+GKE++D VL+
Sbjct: 65 FVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLE 124
Query: 445 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 549
RIR++AD C+GLQGFL+FH LL+E
Sbjct: 125 RIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLE 159
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 118 bits (283), Expect = 8e-28
Identities = 58/148 (39%), Positives = 80/148 (54%)
Frame = +1
Query: 103 VHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 282
+ GQ G Q+G A W EHG+ G T + N +F+E GK+VPRAV
Sbjct: 7 IQAGQCGNQVGAAFWSTIADEHGLDSAGIY--HGTSEAQHERLNVYFNEAAGGKYVPRAV 64
Query: 283 FVDLEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 462
VDLEP +D V++G + LF P+ +I G+ A N +A+GHYT G E+ D VLD +R+ A
Sbjct: 65 LVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREA 124
Query: 463 DQCTGLQGFLIFHXXXXXXXXXXXXLLM 546
+ C LQGF + H LL+
Sbjct: 125 EACDALQGFQLTHSLGGGTGSGMGTLLL 152
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 103 bits (247), Expect = 2e-23
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Frame = +1
Query: 100 SVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRA 279
++ GQ G QIG+ W+ CLEHGI PDG + + T G D + FF ++ +++PRA
Sbjct: 7 TLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT--EGVDRKDVFFYQSDDTRYIPRA 64
Query: 280 VFVDLEPTVVDDVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIR 453
+ +DLEP VV+++ + TY L++PE ++ K A NN+A G Y+ + I + ++D I
Sbjct: 65 ILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMID 123
Query: 454 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 549
+ AD L+GF + H L+E
Sbjct: 124 READGSDSLEGFSLLHSIAGGTGSGLGSFLLE 155
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 32.3 bits (70), Expect = 0.048
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Frame = +2
Query: 125 SRSEMPAGSCIALSTASNLM--VRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSIL 295
SRS P + ++S A+ Q+T P+ V + TP T SS L S+ P+ SSSIL
Sbjct: 346 SRSSKPTDTTNSISFANTTPENTSTQITSPTAVNSSTPITSSSV---LNSSTPITSSSIL 402
Query: 296 N-PL*LTMSALAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 415
N +T S++ ++ + ++ L+ + +T+L +TP+
Sbjct: 403 NTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPI 444
Score = 30.3 bits (65), Expect = 0.20
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 250
T + S S+ + P + S + S ++++S L +T + V + TP T S+A
Sbjct: 1220 TSTPITSSSVLNSSTPITSSSI-LNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTA- 1277
Query: 251 PELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 1278 --LNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 1328
Score = 28.7 bits (61), Expect = 0.60
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 250
T + S S+ + P + S + S +++++ L +T S + + TP T SS
Sbjct: 944 TSTPITSSSVLNSSTPITSSTV-LNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSV- 1001
Query: 251 PELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 1002 --LNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1052
Score = 28.3 bits (60), Expect = 0.79
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSA 247
T + S S+ + P S S + + + I ST N +T + V + TP T S+A
Sbjct: 452 TSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA 509
Query: 248 RPELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
L ++ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 510 ---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 560
Score = 28.3 bits (60), Expect = 0.79
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +2
Query: 92 SGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 268
S +L T S S + + + I STA N +T S + + TP T S+A L ++
Sbjct: 687 STALNTSTPITSSSVLNSSTAITSSTALNTST--PITSSSVLNSSTPITSSTA---LNTS 741
Query: 269 FPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 742 TPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNT 788
Score = 28.3 bits (60), Expect = 0.79
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 250
T + S S+ + P + S + S ++++S L +T + V T TP T S+
Sbjct: 788 TSTPITSSSVLNSSTPITSSTV-LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV- 845
Query: 251 PELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
+ S+ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 846 --VNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 896
Score = 27.9 bits (59), Expect = 1.0
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSA 247
T + S S+ + P S S + + + I STA N +T S + + TP T S+A
Sbjct: 632 TSTPITSSSVLNSSTPITSSSVLNSSTPITSSTALNTST--PITSSSVLNSSTPITSSTA 689
Query: 248 RPELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 415
L ++ P+ SSS+LN S+ A S I ++ L P T T L +TP+
Sbjct: 690 ---LNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPI 744
Score = 27.9 bits (59), Expect = 1.0
Identities = 29/93 (31%), Positives = 43/93 (46%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 310
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1748 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1799
Query: 311 TMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
S+ A S I ++ L P T+ VV T
Sbjct: 1800 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1832
Score = 27.9 bits (59), Expect = 1.0
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +2
Query: 92 SGSLYTLAKPESRSEMPAGSCIALST--ASNLMVRCQLTRPSGVETTPSTRSSARPELAS 265
S + +L S + + + S + ST S+ +V S ST ++ L +
Sbjct: 2565 STPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 2624
Query: 266 TFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
+ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2625 STPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 2672
Score = 27.5 bits (58), Expect = 1.4
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 295
S P S AL+T++ + L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 2096 SSTPITSSTALNTSTPITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 2154
Query: 296 NPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 415
N S+ A S I ++ L P T+ VV +TP+
Sbjct: 2155 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPI 2196
Score = 27.5 bits (58), Expect = 1.4
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 221 TTPSTRSSARPELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLV 400
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2841 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2897
Query: 401 VTT 409
V T
Sbjct: 2898 VNT 2900
Score = 27.5 bits (58), Expect = 1.4
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 221 TTPSTRSSARPELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLV 400
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2937 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2993
Query: 401 VTT 409
V T
Sbjct: 2994 VNT 2996
Score = 27.5 bits (58), Expect = 1.4
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 92 SGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF 271
S S+ + P + S + S +++++ L +T S + ++ + SS+ L S+
Sbjct: 3182 SSSIVNSSTPITSSSV-LNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSS--VLNSST 3238
Query: 272 PVPSSSILN-PL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
P+ SSS+LN +T S + +T S I ++ L P T+ VV T
Sbjct: 3239 PITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVNT 3284
Score = 27.5 bits (58), Expect = 1.4
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Frame = +2
Query: 92 SGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF 271
S +L T S S + + + I STA N +T S + ++ + SS+ L S+
Sbjct: 3303 STTLNTSTPITSSSVLNSSTAITSSTALNTST--PITSSSVLNSSTAITSSSI--LNSST 3358
Query: 272 PVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 415
PV SSS+LN S+ S I ++ +L P T+ V+ +TP+
Sbjct: 3359 PVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 3408
Score = 27.1 bits (57), Expect = 1.8
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNPL* 307
S S ++++S L +T S + T TP T SS L S+ P+ SSSILN
Sbjct: 374 SPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSV---LNSSTPITSSSILNSST 430
Query: 308 LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 415
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 431 PITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 468
Score = 27.1 bits (57), Expect = 1.8
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 149 SCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNPL*LTMSAL 325
S ++++S L +T + + T TP T SS L S+ P+ SSS+LN S+
Sbjct: 608 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSV---LNSSTPITSSSVLNSSTPITSST 664
Query: 326 AHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 415
A S I ++ L P T T L +TP+
Sbjct: 665 ALNTSTPITSSSVLNSSTPITSSTALNTSTPI 696
Score = 27.1 bits (57), Expect = 1.8
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 295
S P S AL+T++ + L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 1904 SSTPITSSTALNTSTPITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 1962
Query: 296 NPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
N S+ A S I ++ L P T+ V+ T
Sbjct: 1963 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNT 2000
Score = 27.1 bits (57), Expect = 1.8
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 295
S P S ++T++++ L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 2408 SSTPITSSTVVNTSTSITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 2466
Query: 296 NPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
N S+ A S I ++ L P T+ VV T
Sbjct: 2467 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 2504
Score = 26.6 bits (56), Expect = 2.4
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 250
T + S S+ + P + S + S +++++ L +T + + T TP T SS
Sbjct: 404 TSTPITSSSVLNSSTPITSSSI-LNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV- 461
Query: 251 PELASTFPVPSSSILN-PL*LTMSALAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 415
L S+ P+ SSS+LN +T S + +T + + ++ + +T L +TP+
Sbjct: 462 --LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPI 516
Score = 26.6 bits (56), Expect = 2.4
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSA 247
T + S S+ + P S S + + + I ST N +T S V + TP T S+A
Sbjct: 1532 TSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTST--PITSSSVVNSSTPITSSTA 1589
Query: 248 RPELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 415
L ++ P+ SSS+LN S+ A S I ++ L P T T+L +TP+
Sbjct: 1590 ---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1644
Score = 26.6 bits (56), Expect = 2.4
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 310
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1580 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1631
Query: 311 TMSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 415
S+ S I ++ +L P T+ VV +TP+
Sbjct: 1632 ITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPI 1668
Score = 26.2 bits (55), Expect = 3.2
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +2
Query: 92 SGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 268
S +L T S S + + + I ST N +T + V + TP T S+A L ++
Sbjct: 1023 STALNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 1077
Query: 269 FPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 1078 TPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT 1124
Score = 25.8 bits (54), Expect = 4.2
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSA 247
T + S S+ + P S S + + + I ST N +T S + + TP T S+A
Sbjct: 1916 TSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSST--PITSSSVLNSSTPITSSTA 1973
Query: 248 RPELASTFPVPSSSILN-PL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
L ++ P+ SSS+LN +T S++ +T S I ++ L P T+ VV T
Sbjct: 1974 ---LNTSTPITSSSVLNSSTPITSSSVLNT-STPITSSSVLNSSTPITSSTVVNT 2024
Score = 25.8 bits (54), Expect = 4.2
Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSAR 250
T + S S+ + P + S + + ++++S L +T + V T TP T S+A
Sbjct: 2720 TSTPITSSSVLNSSTPITSSTV-VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTA- 2777
Query: 251 PELASTFPVPSSSILN-PL*LTMSALAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 415
L ++ P+ SSS+LN +T S + +T + + ++ + +T+L +TP+
Sbjct: 2778 --LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPI 2832
Score = 25.8 bits (54), Expect = 4.2
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 221 TTPSTRSSARPELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLV 400
+TP T S+A L ++ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 3381 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTV 3437
Query: 401 V--TTPL 415
V +TP+
Sbjct: 3438 VNSSTPI 3444
Score = 25.4 bits (53), Expect = 5.6
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +2
Query: 92 SGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 268
S +L T S S + + + I ST N +T + V + TP T S+A L ++
Sbjct: 1803 STALNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 1857
Query: 269 FPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 415
P+ SSS+LN S+ A S I ++ L P T T+L +TP+
Sbjct: 1858 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1908
Score = 25.4 bits (53), Expect = 5.6
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 310
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1844 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1895
Query: 311 TMSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 415
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 1896 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 1932
Score = 25.4 bits (53), Expect = 5.6
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 310
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 2036 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 2087
Query: 311 TMSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 415
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 2088 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 2124
Score = 25.4 bits (53), Expect = 5.6
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 221 TTPSTRSSARPELASTFPVPSSSILN-PL*LTMSALAHTDSCFIQNNLSLVRRMPQTTML 397
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ L P T+
Sbjct: 2301 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSST 2356
Query: 398 VVTT 409
VV T
Sbjct: 2357 VVNT 2360
Score = 25.4 bits (53), Expect = 5.6
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 221 TTPSTRSSARPELASTFPVPSSSILN-PL*LTMSALAHTDSCFIQNNLSLVRRMPQTTML 397
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ L P T+
Sbjct: 2709 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSST 2764
Query: 398 VVTT 409
VV T
Sbjct: 2765 VVNT 2768
Score = 25.0 bits (52), Expect = 7.3
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL* 307
S P S AL+T++ + L +TP T S+ L S+ P+ SSS+LN
Sbjct: 1064 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTV---LNSSTPITSSSVLNSSTP 1115
Query: 308 LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 415
+T S + +T S I ++ +L P T+ V+ +TP+
Sbjct: 1116 ITSSTVVNT-STPITSSTALNTSTPITSSSVLNSSTPI 1152
Score = 25.0 bits (52), Expect = 7.3
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +2
Query: 92 SGSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 268
S L T S S + + + I ST N +T + V + TP T S+A L ++
Sbjct: 1995 SSVLNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 2049
Query: 269 FPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 415
P+ SSS+LN S+ A S I ++ L P T T+L +TP+
Sbjct: 2050 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 2100
Score = 25.0 bits (52), Expect = 7.3
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +2
Query: 74 TQYKMRSGSLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSA 247
T + S S+ + P S S + + + I ST N +T S + + TP T S+A
Sbjct: 2108 TSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSST--PITSSSVLNSSTPITSSTA 2165
Query: 248 RPELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 409
L ++ P+ SSS+LN S+ S I ++ + P T+ VV T
Sbjct: 2166 ---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNT 2216
Score = 24.6 bits (51), Expect = 9.7
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +2
Query: 125 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNP 301
S S + + + I ST N +TR S + + TP T S+ L S+ P+ SSS+LN
Sbjct: 566 SSSVLNSSTPITSSTVVNTST--PITRYSVLNSSTPITSSTV---LNSSTPITSSSVLNS 620
Query: 302 L*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 415
S+ A S I ++ L P T+ V+ +TP+
Sbjct: 621 STPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPI 660
Score = 24.6 bits (51), Expect = 9.7
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 173 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTMSALAHTDSCFI 349
S+ +V S ST ++ L S+ P+ SSS+LN +T S + +T S I
Sbjct: 1370 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPI 1428
Query: 350 QNNLSLVRRMPQTTMLVVTT 409
++ + P T+ VV T
Sbjct: 1429 TSSTVVNSSTPITSSTVVNT 1448
Score = 24.6 bits (51), Expect = 9.7
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 221 TTPSTRSSARPELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQT--TM 394
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T T
Sbjct: 1749 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA 1805
Query: 395 LVVTTPL 415
L +TP+
Sbjct: 1806 LNTSTPI 1812
Score = 24.6 bits (51), Expect = 9.7
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 173 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTMSALAHTDSCFI 349
S+ +V S ST ++ L S+ P+ SSS+LN +T S + +T S I
Sbjct: 2210 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPI 2268
Query: 350 QNNLSLVRRMPQTTMLVVTT 409
++ + P T+ VV T
Sbjct: 2269 TSSTVVNSSTPITSSTVVNT 2288
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.15
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 125 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 298
S S + + + ST S+L ++PS T+ ST SSA P S+ + SSS+++
Sbjct: 160 SSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVS 217
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 29.9 bits (64), Expect = 0.26
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 4/116 (3%)
Frame = +1
Query: 49 YLSTLKLKNSIQNA*WFSVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDS 228
YLST KL+N + W + + Q W Y E + TD+ + S
Sbjct: 208 YLSTRKLENDSETVTWLNTFLQQ--------FW--YIFEPSLSERITEITDQILSENVPS 257
Query: 229 F--NTFFSETGAGKHVPRAVFVDLEPTVVDDVRTGTYRQLFHPEQL--ITGKEDAA 384
F + SE G PR F+ P +D R F P + +TG+E AA
Sbjct: 258 FIDSMALSEFTLGTKSPRMGFIRSYPKTEEDTVMMDLRLAFSPNDISDLTGREIAA 313
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 28.7 bits (61), Expect = 0.60
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 254 ELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQTTMLVV 403
E+ F VP +S LNP +S +TD +++ N+ + R+ T +++
Sbjct: 218 EVKDLFYVPLTSFLNPKHQKISRFRNTDLLYVEFNIDKIPRIWGITAVIL 267
>SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 28.3 bits (60), Expect = 0.79
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Frame = +2
Query: 104 YTLAKPESRSEMPAGSCIALSTASNLMVR-CQLTRPSGVETT---PSTRSSARPEL---- 259
Y + E + ++ G I TA N + + R G + P+T+S A+ +
Sbjct: 60 YVVRDAEKKGKLSRGGTIVEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTLKFL 119
Query: 260 -ASTFPVPSSSILNPL*LTMSALAHTDS 340
A PVP + NPL A H +S
Sbjct: 120 GAEVHPVPVAPFSNPLNYNHQARRHAES 147
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +2
Query: 104 YTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPS 283
++ A+ + S+ + S + Q +PSGVE T ++R++A+ + ST + S
Sbjct: 12 FSYARALASSQSNKSNSTKASENNTATAEKQAVKPSGVEPTNTSRANAQKKTESTGKITS 71
Query: 284 SS 289
+
Sbjct: 72 EA 73
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 27.5 bits (58), Expect = 1.4
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = -1
Query: 546 HEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDFLSNGVVTTSIVVCGILLT 367
HE+ + +TG ++ +++E ++A D E+QV + S G + VV LL
Sbjct: 108 HEKPARPQTGEGSDNEDEDEDIDALIEDLYSQDQEEEQVEEEESPGPAGAAKVVPEELLE 167
Query: 366 SDKLFWMKQLSV 331
+D + + + V
Sbjct: 168 TDPKYGLTESEV 179
>SPBC56F2.11 |met6||homoserine
O-acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 489
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = -2
Query: 248 SLKNVLKESSPPPMVLSVGI*PSGWMPCSRQYSSQQAFPIWTPAWPTCTENHYAFCIEF 72
S K V+K+ S P +VL GI G Q ++FP T E H F +EF
Sbjct: 383 SPKEVMKDLSLPVLVL--GIESDGLFTFDEQVEIAKSFPNATLEKIISAEGHDGFLLEF 439
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 206 PSGVETTPSTRSSARPELASTFPV 277
P+ VETTPST +SA + + F +
Sbjct: 350 PANVETTPSTATSAPKKSTAPFAI 373
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 3.2
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 119 PESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 298
P S S + LST+S ++ T SG PST SS+ P +S P +S+L+
Sbjct: 483 PISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPST-SSSTPS-SSIISSPMTSVLS 540
>SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 508
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 164 SRQYSSQQAFPIWTPAWPTCTENHYAFCIEFFNLSVDK 51
S QY ++ + W + YAF +E+FNLS D+
Sbjct: 279 SPQYI-ERVYCSWELVLTEHVSSEYAFLLEYFNLSKDQ 315
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 450 DAVEDQVYDFLSNGVVT-TSIVVC 382
DA DQ+ +++ NG++T T IV C
Sbjct: 68 DATIDQLQNYMENGILTSTDIVHC 91
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 214 PRWSCQLASDHQVGCRAQGNTAPSRHFRSGLR 119
P SC+L S+H+ C + N++ S + + R
Sbjct: 110 PHLSCELPSEHREKCLKRRNSSLSSNLHANKR 141
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 7.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 243 EERVEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGL 115
EE EG TP +T+R D+V++ + AG++D+ S L
Sbjct: 320 EEISEGEEYTPIEESKEPITVRRDSVIQIDESSAGLTDVISEL 362
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 370 KEDAANNYARGHYTIGKEIVDLV 438
+E ANN+ RGH I K+ D +
Sbjct: 599 RERKANNFFRGHIEIDKKTKDFL 621
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 549 LHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDFLS-NGVV 403
LH + + + ++ ED+ +C ++S AD + + L+ NG++
Sbjct: 1078 LHSQPIQNVSDVNNKKDEDDHEQTSCLIISGIADVFSENMSLLLNVNGIL 1127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,378,226
Number of Sequences: 5004
Number of extensions: 52716
Number of successful extensions: 257
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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