Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H11
(549 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 276 7e-75
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 272 9e-74
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 262 1e-70
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 178 2e-45
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 132 2e-31
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 132 2e-31
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 130 9e-31
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 128 3e-30
03_01_0034 + 318432-318825,318902-319851 128 3e-30
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 127 7e-30
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 126 2e-29
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 117 5e-27
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 101 3e-22
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.61
12_02_0667 + 21682386-21682944,21683042-21683201,21683419-216834... 30 1.4
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.4
09_01_0060 - 942762-943448,943840-943867,944044-944077,944383-94... 29 1.8
08_02_1633 + 28392378-28393445 29 1.8
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.4
09_04_0445 - 17677126-17677512,17677608-17678564 29 3.2
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 29 3.2
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 3.2
12_02_0823 + 23461423-23462124 28 4.3
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 4.3
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 25 4.6
10_08_0421 + 17793875-17794536,17794558-17795515,17795689-17796243 28 5.6
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 5.6
04_01_0438 - 5723451-5723759,5723795-5723863,5724025-5724210,572... 28 5.6
02_05_0998 + 33391021-33391266,33391354-33391502,33391600-333916... 28 5.6
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 28 5.6
12_01_0468 + 3661177-3661626 27 7.5
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90... 27 7.5
05_03_0525 + 15002846-15003048,15004814-15004937,15005458-150054... 27 7.5
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 7.5
06_01_1088 - 8926361-8927301,8927437-8927705,8927850-8929023,892... 27 9.9
04_03_0868 - 20420298-20420915 27 9.9
02_05_0688 - 30918499-30919602 27 9.9
02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733,165... 27 9.9
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 27 9.9
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 276 bits (677), Expect = 7e-75
Identities = 121/150 (80%), Positives = 134/150 (89%)
Frame = +1
Query: 100 SVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRA 279
S+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRA
Sbjct: 6 SIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRA 65
Query: 280 VFVDLEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 459
VFVDLEPTV+D+VRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKL
Sbjct: 66 VFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 460 ADQCTGLQGFLIFHXXXXXXXXXXXXLLME 549
AD CTGLQGFL+F+ LL+E
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 272 bits (668), Expect = 9e-74
Identities = 119/150 (79%), Positives = 133/150 (88%)
Frame = +1
Query: 100 SVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRA 279
S+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGKHVPRA
Sbjct: 6 SIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPRA 65
Query: 280 VFVDLEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 459
VFVDLEPTV+D+VRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LDRIRKL
Sbjct: 66 VFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKL 125
Query: 460 ADQCTGLQGFLIFHXXXXXXXXXXXXLLME 549
AD CTGLQGFL+F+ LL+E
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 262 bits (642), Expect = 1e-70
Identities = 112/150 (74%), Positives = 131/150 (87%)
Frame = +1
Query: 100 SVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRA 279
S+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGKHVPRA
Sbjct: 6 SIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRA 65
Query: 280 VFVDLEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 459
+FVDLEPTV+D+VRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKL
Sbjct: 66 IFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKL 125
Query: 460 ADQCTGLQGFLIFHXXXXXXXXXXXXLLME 549
AD CTGLQGFL+F+ LL+E
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 155
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 178 bits (434), Expect = 2e-45
Identities = 80/118 (67%), Positives = 96/118 (81%)
Frame = +1
Query: 196 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDDVRTGTYRQLFHPEQLITGKE 375
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+D+V+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 376 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 549
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ LL+E
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLE 215
Score = 74.1 bits (174), Expect = 7e-14
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +1
Query: 100 SVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 201
S+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 6 SIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 132 bits (319), Expect = 2e-31
Identities = 64/148 (43%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Frame = +1
Query: 112 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKHVPRAV 282
GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E G+ VPRAV
Sbjct: 10 GQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEASCGRFVPRAV 64
Query: 283 FVDLEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 462
+DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEA 124
Query: 463 DQCTGLQGFLIFHXXXXXXXXXXXXLLM 546
+ C LQGF + H LL+
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 132 bits (318), Expect = 2e-31
Identities = 62/145 (42%), Positives = 85/145 (58%)
Frame = +1
Query: 112 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 291
GQ G QIG+ WE+ C EHGI P G+ + + N +++E G+ VPRAV +D
Sbjct: 190 GQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYNEASCGRFVPRAVLMD 247
Query: 292 LEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 471
LEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 248 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 307
Query: 472 TGLQGFLIFHXXXXXXXXXXXXLLM 546
LQGF + H LL+
Sbjct: 308 DCLQGFQVCHSLGGGTGSGMGTLLI 332
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 130 bits (313), Expect = 9e-31
Identities = 61/145 (42%), Positives = 85/145 (58%)
Frame = +1
Query: 112 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 291
GQ G QIG WE+ C EHGI G+ D + + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRYVPRAVLMD 67
Query: 292 LEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 471
LEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 472 TGLQGFLIFHXXXXXXXXXXXXLLM 546
LQGF + H LL+
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLI 152
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 128 bits (309), Expect = 3e-30
Identities = 59/145 (40%), Positives = 85/145 (58%)
Frame = +1
Query: 112 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 291
GQ G QIG WE+ C EHG+ G+ D + + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGRYVPRAVLMD 67
Query: 292 LEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 471
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 472 TGLQGFLIFHXXXXXXXXXXXXLLM 546
LQGF + H LL+
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLI 152
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 128 bits (309), Expect = 3e-30
Identities = 60/145 (41%), Positives = 83/145 (57%)
Frame = +1
Query: 112 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 291
GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGRFVPRAVLMD 67
Query: 292 LEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 471
LEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127
Query: 472 TGLQGFLIFHXXXXXXXXXXXXLLM 546
LQGF + H LL+
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLI 152
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 127 bits (306), Expect = 7e-30
Identities = 60/145 (41%), Positives = 84/145 (57%)
Frame = +1
Query: 112 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 291
GQ G QIG WE+ C EHGI G+ D + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGRFVPRAVLMD 67
Query: 292 LEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 471
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 472 TGLQGFLIFHXXXXXXXXXXXXLLM 546
LQGF + H LL+
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLI 152
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 126 bits (303), Expect = 2e-29
Identities = 58/125 (46%), Positives = 79/125 (63%)
Frame = +1
Query: 112 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 291
GQ G QIG WE+ C EHGI P G+ + + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGRFVPRAVLMD 67
Query: 292 LEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 471
LEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 472 TGLQG 486
LQG
Sbjct: 128 DCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 117 bits (282), Expect = 5e-27
Identities = 55/124 (44%), Positives = 75/124 (60%)
Frame = +1
Query: 112 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 291
GQ G QIG WE+ C EHG+ P G T + N +F+E G+HVPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGRHVPRAVLMD 67
Query: 292 LEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 471
LEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 472 TGLQ 483
LQ
Sbjct: 128 DCLQ 131
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 101 bits (243), Expect = 3e-22
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Frame = +1
Query: 100 SVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRA 279
++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++PRA
Sbjct: 7 TIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHYIPRA 64
Query: 280 VFVDLEPTVVDDVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIR 453
+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++D I
Sbjct: 65 LLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDMID 123
Query: 454 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLME 549
+ AD L+GF++ H L+E
Sbjct: 124 READGSDSLEGFVLCHSIAGGTGSGMGSYLLE 155
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 224 SSPPPMVLSVGI*PSGWMPCSRQYSSQ 144
S P P+ LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>12_02_0667 +
21682386-21682944,21683042-21683201,21683419-21683467,
21683570-21683683,21683794-21684294,21684594-21684980,
21685074-21685172,21685380-21685478,21685817-21685890,
21686387-21687023
Length = 892
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = -1
Query: 408 VVTTSIVVCGILLTSDKLFWMKQLSVCASADIVNYSGFKIDEDGTGNVLASSGLAEERVE 229
+V + VV G+ L ++ +W + + + I+ Y+G +I L S G R+E
Sbjct: 568 IVYIAFVVHGVCLYINRTWWKQTTWMYLAIPILLYAGERIFR-----ALRSHGFTTVRIE 622
Query: 228 GVVSTPDGLVSWHLT 184
V P +++ H+T
Sbjct: 623 KVAIYPGNVIAIHMT 637
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 221 SPPPMVLSVGI*PSGWMPCSRQYSSQ 144
+P P+ LSV + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
>09_01_0060 -
942762-943448,943840-943867,944044-944077,944383-944437
Length = 267
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -3
Query: 520 RCHHRTSGR*GIPGGLCIGQRVCGCGRGPSLRFPFQ--WCSDHEHSCLRHP 374
RCH RT R G G GQRV G G R W +D HP
Sbjct: 87 RCHRRTRWRAGGEGSSGGGQRVSSFGSGGRQRASSSVVWVADQSAPIADHP 137
>08_02_1633 + 28392378-28393445
Length = 355
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 448 CGRGPSLRFPFQWCSDHEHSCLRHPPY 368
C P L P W + +H C HPP+
Sbjct: 261 CPNHPPLTTPRSWDAHDDHDCPNHPPH 287
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 218 PPPMVLSVGI*PSGWMPCSR 159
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>09_04_0445 - 17677126-17677512,17677608-17678564
Length = 447
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 324 WHIQTVVSSRTTYHW*GGCRKQLCSWSLHHWKGNRRLGPRP 446
WH + + ++H GCR + W+L H G RLG P
Sbjct: 157 WHGISALIPFASWHARSGCRARPARWALFH-HGEVRLGMSP 196
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 128 RSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL 304
+S MP + + TA+ L R LT S V + P + + P TF PSSS +PL
Sbjct: 191 QSNMPPITTETIETANKL--RQDLTNASTVNSAPMSNT---PSQTPTFVSPSSSSTSPL 244
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 212 PMVLSVGI*PSGWMPCSRQYSSQ 144
P+ LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>12_02_0823 + 23461423-23462124
Length = 233
Score = 28.3 bits (60), Expect = 4.3
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +2
Query: 119 PESRSEMPAGSCIAL--STASNLMVRCQLTRPSGVETTPSTRSSARP-ELASTFPVPS 283
P S+ + AG + TA RC LTR +G + P + P EL F PS
Sbjct: 159 PRSQRVVGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLAPGELKVVFCQPS 216
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 254 ELASTFPVPSSSILNPL*LTMSALAHTDSCFIQNNLSLVRRMPQ 385
E A++ P+P+S L+P A A +C + N+S R P+
Sbjct: 2 EAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISCARAAPR 45
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 24.6 bits (51), Expect(2) = 4.6
Identities = 11/73 (15%), Positives = 31/73 (42%)
Frame = -1
Query: 384 CGILLTSDKLFWMKQLSVCASADIVNYSGFKIDEDGTGNVLASSGLAEERVEGVVSTPDG 205
CG L++D +F L +C S +++ D + ++ + +++ + +
Sbjct: 1035 CGNTLSTDSVFSSGALRICMSGVSSSHASGSSSLDDESSSISQTSYISSKIQAAIDILNS 1094
Query: 204 LVSWHLTIRLDAV 166
+++ + D V
Sbjct: 1095 IINTYALTDSDTV 1107
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 426 DFLSNGVVTTSIVVCGILLTSD 361
D L GV+ +S + G+LL D
Sbjct: 979 DNLITGVIQSSFAIFGLLLRQD 1000
>10_08_0421 + 17793875-17794536,17794558-17795515,17795689-17796243
Length = 724
Score = 27.9 bits (59), Expect = 5.6
Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Frame = -1
Query: 447 AVEDQVYDFLSNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADIVNYSGFKIDEDGTGN 268
A E +V S G + C + + +W A IV +G +D DG G
Sbjct: 167 AKEFKVVRMFSEGHYEETATRCEVFVLDSPAYWRPAAGKPPPACIVENTGVFLDSDGGG- 225
Query: 267 VLASSGLAEERVEGVVSTPD------GLVSWHLTIR---LDAVLKAIQLPAG 139
+ S +A+E + + P G+ W + R LD L Q G
Sbjct: 226 -MVSFNVADESFGSLPAPPPLAAAVYGVADWRIRERMTELDGCLCVCQYACG 276
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 131 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 292
SE+P S + S A ++ PS E T + ++RP A FP P S++
Sbjct: 868 SELPQTSTTSNSEAQEETAAIRVASPSVSEVTVT---ASRPSSAPVFPAPRSTV 918
>04_01_0438 -
5723451-5723759,5723795-5723863,5724025-5724210,
5724297-5724558,5724662-5724960,5725040-5725453,
5725533-5725899,5726002-5726146,5726562-5727558
Length = 1015
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 212 PMVLSVGI*PSGWMPCSRQYSSQQAFPIWTPAWPTCTENHYA 87
PMV + + P RQ+ +Q+FP+ PA T + Y+
Sbjct: 702 PMVFDICVEPHAPYRVMRQFGFRQSFPVPFPAGVTAAVHRYS 743
>02_05_0998 +
33391021-33391266,33391354-33391502,33391600-33391681,
33391808-33392223,33393659-33393854,33393932-33394074,
33394153-33394327,33394450-33394503,33394701-33394877,
33395832-33395944,33396083-33396265,33396570-33396632,
33396742-33396894,33396922-33396994,33397076-33397206,
33397285-33397420,33397504-33397581,33398146-33398262,
33398473-33398535,33398619-33398720
Length = 949
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 225 LLQHVLQRDRSWQARSPCRLRRS*THCS*RCPHWHIQTV 341
LL+H+LQRD+ +A L H S RC W + TV
Sbjct: 540 LLRHLLQRDKHEEALRLANLSAEKPHFS-RCLEWLLFTV 577
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 483 LEACALVSEFADAVEDQVYDFLS 415
+ A AL+ E D VED + DFLS
Sbjct: 103 IHALALLDEIPDDVEDDIVDFLS 125
>12_01_0468 + 3661177-3661626
Length = 149
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 549 LHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQ 433
LH + E E VE+EE +E +V E + +E++
Sbjct: 58 LHSDEEEEEEEEEEEEVEEEEDIEEEEVVEEEEEEIEEE 96
>08_01_0114 -
900530-901191,901269-901338,901536-901640,901721-901831,
901912-902016,902245-902391,903273-903354,903445-903786,
903873-904177,904259-904435,904799-904852,905171-905254,
905855-905968,906048-906321,907552-907926,908003-908267,
908352-908538,908615-909052,909895-909966,910037-910630,
911471-911623,911700-911828,912326-912657,912705-912840,
913046-913491,913580-915087,915169-915431,915622-915738,
915844-916014,916743-916845,916930-916988,918360-918461,
918560-918649,918727-918877,919745-919830,919926-920102,
920915-920978,921859-922008,923132-923211,923311-923376,
924540-924747,925502-925575,925761-925848,926140-926312,
926541-926609,926698-926741,927074-927167,927290-927366,
927475-927552,927992-928085
Length = 3314
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 253 GAGKHVPRAVFVDLEPTVVDDVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVD 432
GAG + F D+ ++ D+ GT FHP N+Y+ IG ++VD
Sbjct: 493 GAGGTADTSSFADVSDDIIKDIYEGTE---FHPISSAENHLTKENHYSLFVRKIGMKLVD 549
>05_03_0525 +
15002846-15003048,15004814-15004937,15005458-15005481,
15005995-15006779,15006839-15006873,15007108-15007601,
15007951-15008452,15008725-15008867,15009523-15009576,
15010255-15010362,15010529-15010705,15011169-15011186,
15011561-15011938,15012125-15012310,15012356-15013205,
15013362-15013402,15013491-15013868,15014195-15014236,
15014528-15014678,15015621-15015670
Length = 1580
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 95 GSLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSA 247
GS YTLAKP S + +++L + Q++ VE+ P A
Sbjct: 179 GSQYTLAKPSSSERFYTDKFSDATGSNHLKLHRQISDNGNVESRPELNKDA 229
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 181 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 276
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 438 PRPHPQTR*PMHRPPGIPHLP 500
PRPHP R H PP P P
Sbjct: 129 PRPHPDIRILAHAPPPAPPPP 149
>06_01_1088 -
8926361-8927301,8927437-8927705,8927850-8929023,
8929132-8929399
Length = 883
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 137 MPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTM 316
MP S + +L + C+L P G+ PS R R + S V + L LT
Sbjct: 808 MPVDSFVGFKYLQDLKIHCKLLCPQGMVLPPSLR---RLSIVSGRKVDFPACLQS--LTS 862
Query: 317 SALAHTDSC 343
+ H SC
Sbjct: 863 LNILHLSSC 871
>04_03_0868 - 20420298-20420915
Length = 205
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +3
Query: 405 LHHWKG--NRRLGPRPHPQTR*PMHRPP 482
LH +K +RLGPRP Q+R P H P
Sbjct: 10 LHCYKAPEEQRLGPRPATQSRPPPHLLP 37
>02_05_0688 - 30918499-30919602
Length = 367
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 262 KHVPRAVFVDLEPTVVDDVR 321
K VPRA+++D + VDDVR
Sbjct: 157 KCVPRAIYLDSDVLAVDDVR 176
>02_01_0251 -
1652356-1652522,1652564-1652608,1652658-1652733,
1652976-1653041,1653120-1653238,1653334-1653508,
1653604-1653881,1654253-1654436,1654455-1654550,
1654872-1655012,1655091-1655123
Length = 459
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 507 ERVEDEESLEACALVSEFADAVEDQVYDFLSNGVVTTS 394
E + +EE+ A + SE +DAVE+ Y VV+ S
Sbjct: 154 EYIHEEENQSAVPITSEESDAVENYTYSEPPQQVVSQS 191
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 27.1 bits (57), Expect = 9.9
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = -1
Query: 414 NGVVTTSIVVCGILLTSDKLFWMKQLSVCASADIVNYSGFKIDEDGTGNVLASSGLAEER 235
+GVV V G+ T D + ++ V S ++ G G++++ +GLA
Sbjct: 290 SGVVRVGDKVHGLRSTDDGVQKIEDGKVVKLMKKKGTSMVIVEAAGAGDIISMAGLAAPA 349
Query: 234 VEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISD 130
+ VS D L + TI LD I + G++D
Sbjct: 350 IGHTVSNSDILTALP-TIELDP--PTISMTFGVND 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,966,154
Number of Sequences: 37544
Number of extensions: 428810
Number of successful extensions: 1436
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -