Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_H09
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    42   6e-04
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    40   0.002
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    40   0.002
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    38   0.007
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    33   0.20 

>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown protein.
          Length = 908

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 22/80 (27%), Positives = 33/80 (41%)
 Frame = +1

Query: 319  INVSVHILKKKKKNSRLVHSLFTRSRMHALQRIQNRFVRKAVGAQWFERTVDLHRHLNLP 498
            + +   IL    K    +  L   S +  +Q IQN+  R   G +WF R   LHR L L 
Sbjct: 792  LTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLA 851

Query: 499  SIRSVFKTQCRAFFERAETH 558
            ++          + +R E H
Sbjct: 852  TVFDEINKHSSRYHDRLERH 871


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = +1

Query: 385 TRSRMHALQRIQNRFVRKAVGAQWFERTVDLHRHLNLPSIRSVFKTQCRAFFERAETH 558
           +RS +  +QR Q+R +R   GA W+ R  ++HR L +  +  V   +   + E+  TH
Sbjct: 805 SRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTH 862


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = +1

Query: 385 TRSRMHALQRIQNRFVRKAVGAQWFERTVDLHRHLNLPSIRSVFKTQCRAFFERAETH 558
           +RS +  +QR Q+R +R   GA W+ R  ++HR L +  +  V   +   + E+  TH
Sbjct: 805 SRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTH 862


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +1

Query: 385 TRSRMHALQRIQNRFVRKAVGAQWFERTVDLHRHLNLPSI 504
           + S +  +QR Q++ +R   GA W+ R+ ++ R LN+PS+
Sbjct: 807 SNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSV 846


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p protein.
          Length = 906

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 15/63 (23%), Positives = 28/63 (44%)
 Frame = +1

Query: 370  VHSLFTRSRMHALQRIQNRFVRKAVGAQWFERTVDLHRHLNLPSIRSVFKTQCRAFFERA 549
            +  +  +S  + +Q +QNR +R      ++ R   LHR LNL ++          + +R 
Sbjct: 815  IWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRL 874

Query: 550  ETH 558
              H
Sbjct: 875  RRH 877


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,592,454
Number of Sequences: 53049
Number of extensions: 493688
Number of successful extensions: 1261
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)