Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H07
(595 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 304 3e-83
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 292 2e-79
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 280 5e-76
01_01_0639 + 4825703-4826155,4826344-4826559,4826683-4827411 34 0.098
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.69
02_01_0759 - 5628913-5630870,5631023-5631047 31 0.69
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 31 0.92
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 30 1.6
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 4.9
12_01_1091 + 11349034-11349438,11350581-11350748,11351189-113515... 28 6.5
03_03_0149 + 14843880-14844145,14846501-14846561,14846608-148467... 28 6.5
09_06_0319 - 22293869-22293906,22294539-22295808 27 8.5
09_06_0088 + 20774901-20775491,20776172-20776687 27 8.5
06_02_0084 - 11547820-11548773 27 8.5
06_01_0499 - 3581145-3582425 27 8.5
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 304 bits (747), Expect = 3e-83
Identities = 139/194 (71%), Positives = 158/194 (81%)
Frame = +1
Query: 13 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 192
MGRRPARCYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 193 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 372
SSEALEA RI CNKY+ KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 373 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRPKFKFPGSQKISVSKKWGFTKYEREE 552
KPQGT ARV IGQ ++SVR + EALRR KFKFPG QKI S+KWGFTK+ REE
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREE 180
Query: 553 FEKLRDAGRFANDG 594
+ KL+ GR +DG
Sbjct: 181 YVKLKAEGRIMSDG 194
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 292 bits (716), Expect = 2e-79
Identities = 131/190 (68%), Positives = 153/190 (80%)
Frame = +1
Query: 25 PARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEA 204
P RCYR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEA
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371
Query: 205 LEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQG 384
LEA RI CNKY+ K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP G
Sbjct: 372 LEAARIACNKYMAKHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTG 431
Query: 385 TVARVRIGQPIMSVRSSDRWKAQVIEALRRPKFKFPGSQKISVSKKWGFTKYEREEFEKL 564
T ARVRIGQ ++SVR D A EALRR KFKFPG Q++ S KWGFT+++R+E+ KL
Sbjct: 432 TCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKL 491
Query: 565 RDAGRFANDG 594
+ GR DG
Sbjct: 492 KSEGRIVPDG 501
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 280 bits (687), Expect = 5e-76
Identities = 127/187 (67%), Positives = 148/187 (79%)
Frame = +1
Query: 34 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 213
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 214 GRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 393
RI CNKY+ K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT A
Sbjct: 64 ARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCA 123
Query: 394 RVRIGQPIMSVRSSDRWKAQVIEALRRPKFKFPGSQKISVSKKWGFTKYEREEFEKLRDA 573
RV IGQ ++SVR EALRR KFKFPG QKI S+KWGFTK+ R+E+ +L+
Sbjct: 124 RVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSE 183
Query: 574 GRFANDG 594
GR DG
Sbjct: 184 GRIMPDG 190
>01_01_0639 + 4825703-4826155,4826344-4826559,4826683-4827411
Length = 465
Score = 33.9 bits (74), Expect = 0.098
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 322 SCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRPKFKFPGS- 498
S G DR + G+P+ + VR P++ +++ W A + + P + PG+
Sbjct: 251 SSYGYDRSPKIVEMDTGRPKSRSSSVRTSPPVVDAGAAEEWYANSVSSPLLPFHQLPGAP 310
Query: 499 QKISVSKKWGFTKYEREEFEKLRDA 573
+IS F +Y+ EK R A
Sbjct: 311 PRISAPSARHFPEYDWCPLEKPRPA 335
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 136 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 255
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = -3
Query: 437 SLERTDIMGCPIRT---RATVPWGFPNAPRIPVWSLSAPAHDNILLMRMTWKGCSLIRMW 267
SLER DI CP+ T A V G PN + V S S +D +R + CS I+
Sbjct: 233 SLERLDITRCPLITDKGLAAVAHGCPNLLSLTVESCSGVGNDG---LRAIGRSCSKIQAL 289
Query: 266 N 264
N
Sbjct: 290 N 290
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 241 RGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPLS 134
R CC GL P P S+ R+ +L A S P+S
Sbjct: 179 RSRCCRHRGLSPPPSRSSPRSPSSLPAAPAASLPVS 214
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = -3
Query: 416 MGCPIRTRATVPWGFPNAPRIPVWSLSAPAH 324
+ CP+ + + VP P++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 370 GKPQGTVARVRIGQPIMSVRSSD 438
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>12_01_1091 +
11349034-11349438,11350581-11350748,11351189-11351500,
11351995-11352063,11352177-11352269,11352642-11352844,
11354783-11355056,11355561-11355606,11355646-11355806
Length = 576
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 376 PQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRPKFKFPGS--QKISVSKKWGFTKYERE 549
P G +AR QP+ V + + + +E L P ++ S + F + RE
Sbjct: 37 PHGLLARAAC-QPLRHVAAPAEGEGEEVEDLGTPSAAAVAEAIRRASSASPVRFRRVHRE 95
Query: 550 EFEKLRDAGRF 582
E EKLR G F
Sbjct: 96 ENEKLRGEGGF 106
>03_03_0149 +
14843880-14844145,14846501-14846561,14846608-14846720,
14848448-14848540,14849578-14849793,14853773-14856023
Length = 999
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1
Query: 331 QRTTTFY*CG*HGRGVVSSGCGTDLYRSSLRGTCCNRYGLLPAPQ 197
+ TTT CG HGR ++SS L+++++ G+ +Y + PQ
Sbjct: 134 RETTTTSSCGEHGRILLSSP-SPSLFKANVLGSLAYKYITMGIPQ 177
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 370 GKPQGTVARVRIGQPIMSVRSSD 438
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>09_06_0088 + 20774901-20775491,20776172-20776687
Length = 368
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = -3
Query: 470 RRASMT---CAFQRSLERTDIMGCPIRTRATVPWGFPNAPRIPVWSLSAPAHDNILLMRM 300
R +S+T C+ ++ T+++GCP+R V G P + R + P D +
Sbjct: 210 RESSITPIHCSDEQLAAVTEVLGCPVRLLPIVYLGLPLSVRKLGKADLQPMMDRLAKSLA 269
Query: 299 TWK 291
+WK
Sbjct: 270 SWK 272
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 319 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 447
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
>06_01_0499 - 3581145-3582425
Length = 426
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 571 HHVASQIPHVRTW*SPTS 518
H A+++ HVR W SPTS
Sbjct: 116 HGAAAELAHVRAWWSPTS 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,616,495
Number of Sequences: 37544
Number of extensions: 404031
Number of successful extensions: 1100
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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