Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_H05
         (393 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   2.9  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   6.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    20   8.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 171 RNRLSSLPKWKRRRQFMRNGLRM 239
           RNR SSLP +K +   + N L M
Sbjct: 312 RNRFSSLPYYKYKYLNVINALEM 334


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 171 RNRLSSLPKWKRRRQFMRNGLRM 239
           RNR SSLP +K +   + N L M
Sbjct: 312 RNRFSSLPYYKYKYLNVINALEM 334


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 171 RNRLSSLPKWKRRRQFMRNGL---RMLNQLHHGLK 266
           RNRL  L  +KR+  F  N     + LN L  G K
Sbjct: 293 RNRLQLLESFKRKVNFYPNNQDIEKFLNYLKRGGK 327


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 70  RGVLSRDQRWDVVVD 114
           RG++   +RW  V+D
Sbjct: 320 RGIMMLPERWQKVID 334


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 338 PDWPSLLVLGLYQM 297
           P+W  L++ GL+ M
Sbjct: 33  PNWTDLVLAGLFTM 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,481
Number of Sequences: 438
Number of extensions: 1562
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)