Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H04
(417 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 32 0.15
AC091124-1|AAK27878.1| 255|Caenorhabditis elegans Hypothetical ... 32 0.15
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 31 0.25
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 31 0.34
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 31 0.34
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 31 0.34
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 31 0.34
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 30 0.59
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 30 0.59
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 30 0.59
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 30 0.59
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 30 0.59
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 30 0.59
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 30 0.78
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 1.0
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 1.0
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 1.0
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF039052-12|AAF98633.1| 391|Caenorhabditis elegans Hypothetical... 29 1.8
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 2.4
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 28 2.4
AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical... 28 2.4
Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical p... 28 3.1
Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical pr... 28 3.1
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 28 3.1
Z83230-2|CAC42304.1| 444|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 27 4.1
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 27 4.1
U55363-6|AAA97964.1| 522|Caenorhabditis elegans Defective sperm... 27 5.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 5.5
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z72516-1|CAA96687.2| 156|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 27 7.2
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 27 7.2
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ... 27 7.2
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 26 9.5
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 26 9.5
Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical pr... 26 9.5
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 26 9.5
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 26 9.5
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 26 9.5
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 26 9.5
U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical p... 26 9.5
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 26 9.5
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 26 9.5
U39851-8|AAF99879.1| 937|Caenorhabditis elegans Hypothetical pr... 26 9.5
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 26 9.5
AF067216-14|AAC17517.4| 729|Caenorhabditis elegans Hypothetical... 26 9.5
AC024810-16|AAO21412.2| 684|Caenorhabditis elegans Cdt (s. pomb... 26 9.5
AC024810-15|AAF60769.1| 741|Caenorhabditis elegans Cdt (s. pomb... 26 9.5
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 32.3 bits (70), Expect = 0.15
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 105 QILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQK 230
++LN EK+ +++KEAV S +++++ ++ L + SK QK
Sbjct: 234 KLLNPEKQSFSNQQEKEAVLSATDNMSQNFENLEKSLSKNQK 275
>AC091124-1|AAK27878.1| 255|Caenorhabditis elegans Hypothetical
protein Y47A7.2 protein.
Length = 255
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLP 239
E + R KK+K ++K+ A + NKE RL + ++L K P
Sbjct: 122 EPQKRRSKKEKNSLKAAARTCNKEARRLKSQCARLAKCCP 161
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 31.5 bits (68), Expect = 0.25
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
EKE +K ++E + +AE+ ++D ++E S +K PV +G +++
Sbjct: 293 EKEEKLKKAEEEKARRRAEAGKSKFDSSSDEESPENEKFPVGNGKSEYQED 343
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 0.34
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 105 QILNSEKELNRE-KKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
++ +K L E KK + A KSQ E+ Y +L+ E SKL + L +T GG + +E
Sbjct: 858 KMAEEQKVLEAEAKKAESARKSQEEA----YAKLSAERSKLLEALELTQGGSAAIEE 910
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPV 242
S K ++++ ++ Q E K +DRL E KLQ+K+ V
Sbjct: 1843 SIKGYTKQERRARELQFQVEEDKKAFDRLQENVEKLQQKIRV 1884
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 0.34
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 105 QILNSEKELNRE-KKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
++ +K L E KK + A KSQ E+ Y +L+ E SKL + L +T GG + +E
Sbjct: 858 KMAEEQKVLEAEAKKAESARKSQEEA----YAKLSAERSKLLEALELTQGGSAAIEE 910
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPV 242
S K ++++ ++ Q E K +DRL E KLQ+K+ V
Sbjct: 1843 SIKGYTKQERRARELQFQVEEDKKAFDRLQENVEKLQQKIRV 1884
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 0.34
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 105 QILNSEKELNRE-KKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
++ +K L E KK + A KSQ E+ Y +L+ E SKL + L +T GG + +E
Sbjct: 858 KMAEEQKVLEAEAKKAESARKSQEEA----YAKLSAERSKLLEALELTQGGSAAIEE 910
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPV 242
S K ++++ ++ Q E K +DRL E KLQ+K+ V
Sbjct: 1843 SIKGYTKQERRARELQFQVEEDKKAFDRLQENVEKLQQKIRV 1884
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 31.1 bits (67), Expect = 0.34
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAE---SLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
E LN E K EA++ AE + E D+L EH K QK L K+ E
Sbjct: 95 ENSLNLEIKQAEAMEIDAELERQVEMEADKLEREHRKNQKNLKKEEKKQEKQQE 148
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 30.3 bits (65), Expect = 0.59
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 105 QILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQK--KLPVTSGGDSKKDE 272
Q+ ++KEL +K+K ++ Q + L K ++ E+ KLQK +L + S +DE
Sbjct: 297 QMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDE 354
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 123 KELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
K++ KK+ EA + + L ++ DRL + H+ Q+ +
Sbjct: 296 KQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDI 333
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 30.3 bits (65), Expect = 0.59
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 105 QILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQK--KLPVTSGGDSKKDE 272
Q+ ++KEL +K+K ++ Q + L K ++ E+ KLQK +L + S +DE
Sbjct: 297 QMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAKSTEDE 354
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 123 KELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
K++ KK+ EA + + L ++ DRL + H+ Q+ +
Sbjct: 296 KQMEAAKKELEASEKEKSELREQMDRLQKVHNAGQEDI 333
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 30.3 bits (65), Expect = 0.59
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +3
Query: 135 REKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVT 245
+++ DK+ + ++ LN++ +E SK+ KK P++
Sbjct: 211 KDQSDKDIISNKKRKLNRQSKEEIDERSKIAKKAPIS 247
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 105 QILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGD-SKKD 269
+++ ++E R+++D++AV + K + ++H K + K P+ G D S KD
Sbjct: 165 ELVEKKREEKRQQEDQKAVVLEKR---KPVTQKVQDHLKRRSKSPIGRGKDQSDKD 217
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 30.3 bits (65), Expect = 0.59
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 147 DKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKD 269
+KE +K Q E L K D L ++ +Q+KL + +KD
Sbjct: 189 EKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQKD 229
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 30.3 bits (65), Expect = 0.59
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 147 DKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKD 269
+KE +K Q E L K D L ++ +Q+KL + +KD
Sbjct: 189 EKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQKD 229
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 30.3 bits (65), Expect = 0.59
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 147 DKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKD 269
+KE +K Q E L K D L ++ +Q+KL + +KD
Sbjct: 189 EKEKMKEQNEILEKNMDSLESKNKDIQRKLEIAKQTVEQKD 229
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.9 bits (64), Expect = 0.78
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 111 LNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQK 230
L EK L++EKK+KE + + E K+ ++ E K +K
Sbjct: 124 LAEEKRLDKEKKEKERLDKKLEEDKKKEEKRKEAEEKKKK 163
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 108 ILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKK 233
+L + KEL ++ + ++ Q ESL E + L EE+ L+++
Sbjct: 84 LLEASKELKKKDRANSLLRDQNESLRGENESLREENCSLREE 125
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYD-RLAEEHSKLQK 230
E EL+R+K+ K ++ E L KE++ ++AE +L+K
Sbjct: 362 EAELDRQKELKLQLEKDMEDLRKEHEGQMAELEKRLEK 399
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 108 ILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKK 233
+L + KEL ++ + ++ Q ESL E + L EE+ L+++
Sbjct: 84 LLEASKELKKKDRANSLLRDQNESLRGENESLREENCSLREE 125
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYD-RLAEEHSKLQK 230
E EL+R+K+ K ++ E L KE++ ++AE +L+K
Sbjct: 362 EAELDRQKELKLQLEKDMEDLRKEHEGQMAELEKRLEK 399
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHS-KLQKKLPVTSGGDSK 263
E L + KKDKEA K+ A + + +E S + Q + P T+ G SK
Sbjct: 457 ENRLGQNKKDKEAAKTSARVETVKLKEVKKEKSPEQQPEDPKTARGTSK 505
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHS-KLQKKLPVTSGGDSK 263
E L + KKDKEA K+ A + + +E S + Q + P T+ G SK
Sbjct: 457 ENRLGQNKKDKEAAKTSARVETVKLKEVKKEKSPEQQPEDPKTARGTSK 505
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 99 RTQILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVT 245
R Q+ E +L+RE+K EA+ +Q +S+ A + + KKL T
Sbjct: 484 RFQMQGKESDLSRERKMTEALSAQLQSVVSSSQEEALKKEEELKKLKAT 532
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 99 RTQILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVT 245
R Q+ E +L+RE+K EA+ +Q +S+ A + + KKL T
Sbjct: 150 RFQMQGKESDLSRERKMTEALSAQLQSVVSSSQEEALKKEEELKKLKAT 198
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 99 RTQILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVT 245
R Q+ E +L+RE+K EA+ +Q +S+ A + + KKL T
Sbjct: 484 RFQMQGKESDLSRERKMTEALSAQLQSVVSSSQEEALKKEEELKKLKAT 532
>AF039052-12|AAF98633.1| 391|Caenorhabditis elegans Hypothetical
protein T22D1.12 protein.
Length = 391
Score = 28.7 bits (61), Expect = 1.8
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = -1
Query: 240 LVISSAICYAPLQVYHI 190
LV++ A+C+AP+ +YH+
Sbjct: 278 LVLTYAVCWAPMNIYHV 294
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 99 RTQILNSEKELNREK---KDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKD 269
R++ E+EL REK ++KE K + + KE ++ E+ + +K+ + K++
Sbjct: 212 RSERKEKERELEREKEKSREKEREKEREKEREKEREKEREKQKEREKEREKEREKEKKRE 271
Query: 270 E 272
E
Sbjct: 272 E 272
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKK 233
SEK+ + E+K+K+ S ++ +K DR +E+ S+ K
Sbjct: 158 SEKKKSAEEKEKKKKSSSSKERHKSSDRSSEKSSEKSSK 196
>AC006684-10|AAF39962.2| 665|Caenorhabditis elegans Hypothetical
protein T02H6.2 protein.
Length = 665
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 132 NREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVT 245
NREKK+ EA K ESL ++ D + S+ P T
Sbjct: 532 NREKKEAEARKKVEESLKRKLDSSKVKPSQTSSPNPYT 569
>Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.6 protein.
Length = 316
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 150 CLSFLCSVPFPNSKFVFLT 94
C+SFL SVPF + VFLT
Sbjct: 247 CMSFLSSVPFLSLSHVFLT 265
>Z27079-10|CAD90180.1| 658|Caenorhabditis elegans Hypothetical
protein T05G5.9b protein.
Length = 658
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 108 ILNSEKELNREKKDKEAVKSQAESLNKEYDRLAE 209
I ++ E+N KK+K KS E L +E RL +
Sbjct: 156 ITENDLEVNNMKKEKNNTKSSIEKLTEENTRLTK 189
>Z27079-9|CAA81596.2| 660|Caenorhabditis elegans Hypothetical
protein T05G5.9a protein.
Length = 660
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 108 ILNSEKELNREKKDKEAVKSQAESLNKEYDRLAE 209
I ++ E+N KK+K KS E L +E RL +
Sbjct: 158 ITENDLEVNNMKKEKNNTKSSIEKLTEENTRLTK 191
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
EK+ + +K DK+ KS+++ NK + K K D KKD+
Sbjct: 150 EKKDDDKKDDKKEAKSKSKKSNKSKKSKKSKREKKDDKKDEDKKDDDKKDD 200
>Z83230-2|CAC42304.1| 444|Caenorhabditis elegans Hypothetical
protein F56A8.3a protein.
Length = 444
Score = 27.5 bits (58), Expect = 4.1
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLN-KEYDRLAEEHSKLQKKLPVTSGGDSKKDE-------* 275
+KE KK+K+A K Q E++N + + K QKK P + KK E
Sbjct: 184 KKEKAAAKKEKDA-KQQRETVNAASHKNNHSQQPKSQKKEPHPKKNEQKKTEQPRGFFRK 242
Query: 276 MYQFILSCTGLIFYLGLM 329
++ F+ SC +FYL ++
Sbjct: 243 LFGFVWSC---VFYLTIV 257
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 108 ILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
IL ++E+ E D+E +++ + L KE RL + Q + GG++ ++E
Sbjct: 272 ILEVKQEVKEEIIDEEFDEAERKRLKKEKKRLKRLREQQQPENEGAEGGEADEEE 326
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 126 ELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
E EKKDK+ + + E K+ D+ +E K +KK D KKD+
Sbjct: 187 EKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKDKKD-KKDK 234
>U55363-6|AAA97964.1| 522|Caenorhabditis elegans Defective
spermatogenesis protein39, isoform a protein.
Length = 522
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +3
Query: 156 AVKSQAESLNKEYDRLAEEHSKLQ 227
++ S+A+ L+ +Y+RL +EH KL+
Sbjct: 131 SLPSEAQRLDLDYNRLRQEHRKLK 154
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 132 NREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKK 266
N E D EA+K + + KE +R E+ +KK+ S KK
Sbjct: 417 NPEPLDPEAIKKKEKEKEKEAEREKEKAKDREKKIAALSKPIPKK 461
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 147 LSFLCSVPFPNSKFVFLTLPIPFCFVPRLLLVYPTTTW 34
L F SV F + +F + FCF LLL Y +TT+
Sbjct: 35 LFFSASVAFYRKRKIFHPM-FSFCFFSLLLLYYSSTTF 71
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQ--AESLNKEYDRLAEEHSKLQKK 233
EK+ EKKD+E K + E K+ D + E+ K+++K
Sbjct: 332 EKKEEEEKKDEEPKKEEEKKEEEEKKEDEVEEKSEKVEEK 371
>Z72516-1|CAA96687.2| 156|Caenorhabditis elegans Hypothetical
protein T25G3.1 protein.
Length = 156
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 108 ILNSEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDS 260
+LN + +L +E+ +KE + + E E D+L E K+ K P GDS
Sbjct: 77 VLNEKTDLTKEELEKELEEKKKE----EGDKLIAE-GKITFKKPTKRAGDS 122
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/41 (26%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +3
Query: 114 NSEKELNREKKDKEAVKSQ-AESLNKEYDRLAEEHSKLQKK 233
+ +KE ++KKDK++ K + +++ +E D +A E + +++
Sbjct: 281 DEKKEAKKDKKDKKSKKEKDSDAEEEEQDHIAAEQEQKEEE 321
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHS 218
+K++ ++K+DKE+ + + EYD +E+ S
Sbjct: 474 DKDIKKKKEDKESSEGTGSEPDDEYDSGSEQDS 506
>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
protein Y76B12C.2 protein.
Length = 1119
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQA-ESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKD 269
SE E + E D E+ S+A E + + K+Q+K ++SGG + KD
Sbjct: 271 SESESSSESPDDESEASEASEDPSIPGPSEPRKRRKIQRKSTLSSGGATTKD 322
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 105 QILNSEKELNR-EKKDKEAVKSQAESLNKEYDRLAEEHSKLQ 227
+I + +KE+ E K A ++ E K+YDRL E+ KL+
Sbjct: 627 KIKDKKKEVKEAEAALKSARGAEKEKAQKKYDRLKEQLKKLK 668
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 105 QILNSEKELNR-EKKDKEAVKSQAESLNKEYDRLAEEHSKLQ 227
+I + +KE+ E K A ++ E K+YDRL E+ KL+
Sbjct: 699 KIKDKKKEVKEAEAALKSARGAEKEKAQKKYDRLKEQLKKLK 740
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
S EL ++ +DK+ + +E + +EE +KLQ KL
Sbjct: 821 SYTELRKKVEDKDEEYRKIVQEGEELQKCSEERNKLQSKL 860
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
S EL ++ +DK+ + +E + +EE +KLQ KL
Sbjct: 807 SYTELRKKVEDKDEEYRKIVQEGEELQKCSEERNKLQSKL 846
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
S EL ++ +DK+ + +E + +EE +KLQ KL
Sbjct: 807 SYTELRKKVEDKDEEYRKIVQEGEELQKCSEERNKLQSKL 846
>Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical
protein R74.8b protein.
Length = 448
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEE 212
EK++ E+K KE ++ E +E DR A E
Sbjct: 85 EKQIEEERKAKEEQRANEERAKEERDRRALE 115
>Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical
protein R74.8a protein.
Length = 506
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEE 212
EK++ E+K KE ++ E +E DR A E
Sbjct: 85 EKQIEEERKAKEEQRANEERAKEERDRRALE 115
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 105 QILNSEKELNR-EKKDKEAVKSQAESLNKEYDRLAEEHSKLQ 227
+I + +KE+ E K A ++ E K+YDRL E+ KL+
Sbjct: 699 KIKDKKKEVKEAEAALKSARGAEKEKAQKKYDRLKEQLKKLK 740
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 111 LNSEKELNREKKDKE-AVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
LNS++E+ +EKK E + ++++KE D+ + KKL + KK++
Sbjct: 80 LNSKEEVKKEKKKSEDDLLDVKKTVSKEDDKKKVDKKDGSKKLSKKKLKEEKKEK 134
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 123 KELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKDE 272
KE NREKKD + S + K D +E K++K V + + KK+E
Sbjct: 585 KEKNREKKDAKEESSSDD--KKSTDEKKKEIKKIEKTNKV-NHDEPKKEE 631
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 141 KKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
+KD +VK AE N+E R+ E K + KL
Sbjct: 142 EKDLISVKKDAERSNEETKRIRNELEKTENKL 173
>U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical
protein F55C12.1c protein.
Length = 416
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 141 KKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
+KD +VK AE N+E R+ E K + KL
Sbjct: 104 EKDLISVKKDAERSNEETKRIRNELEKTENKL 135
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 141 KKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
+KD +VK AE N+E R+ E K + KL
Sbjct: 159 EKDLISVKKDAERSNEETKRIRNELEKTENKL 190
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 141 KKDKEAVKSQAESLNKEYDRLAEEHSKLQKKL 236
+KD +VK AE N+E R+ E K + KL
Sbjct: 156 EKDLISVKKDAERSNEETKRIRNELEKTENKL 187
>U39851-8|AAF99879.1| 937|Caenorhabditis elegans Hypothetical
protein C23G10.8 protein.
Length = 937
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQKKLPVTSGGDSKKD 269
++E REK D+E ++SQ + + A +++ K+P TS KD
Sbjct: 810 DREEEREK-DRERLQSQLSTSSSGPQGSASRKERMEYKIPTTSRRKFGKD 858
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 117 SEKELNREKKDKEAVKSQAESLN-KEYDRLAEEHSKLQKKLPVTSGGDSKK 266
SEK L + K K+++KS + +E + + +HS K P +S SKK
Sbjct: 478 SEKNLEK-KASKKSIKSSRSGIQQREVTKTSSKHSSKHSKAP-SSKKSSKK 526
>AF067216-14|AAC17517.4| 729|Caenorhabditis elegans Hypothetical
protein C35E7.1 protein.
Length = 729
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDR----LAEEHSKLQKKLPVTSGGDSKK 266
E E + + E + SL EYDR LAEE+ +K+ T GD ++
Sbjct: 509 ESEQGSDGETSEESFLERASLFDEYDRMIEILAEEYDTPVRKMSFTKNGDQQR 561
>AC024810-16|AAO21412.2| 684|Caenorhabditis elegans Cdt (s. pombe
licensing factor)homolog protein 1, isoform b protein.
Length = 684
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 377 QTYEFKYTYAALINNCHKT*IENQ-TCARQN-KLIH 276
+ + F+Y A+++ CH +E+Q CA N K +H
Sbjct: 404 RAHVFRYKLASIVTKCHTEFLESQGLCASSNIKRMH 439
>AC024810-15|AAF60769.1| 741|Caenorhabditis elegans Cdt (s. pombe
licensing factor)homolog protein 1, isoform a protein.
Length = 741
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 377 QTYEFKYTYAALINNCHKT*IENQ-TCARQN-KLIH 276
+ + F+Y A+++ CH +E+Q CA N K +H
Sbjct: 404 RAHVFRYKLASIVTKCHTEFLESQGLCASSNIKRMH 439
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,305,096
Number of Sequences: 27780
Number of extensions: 134012
Number of successful extensions: 895
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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