Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_H04
(417 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.34
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 25 0.34
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 24 0.60
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 1.0
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 2.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 3.2
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 4.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 4.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 4.2
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 21 5.6
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 21 5.6
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 20 9.7
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.0 bits (52), Expect = 0.34
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQK 230
E+E N K +KE K + S + D+ E SK +K
Sbjct: 44 EREQNSYKNEKEYRKYRERSKERSRDKRERERSKERK 80
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.0 bits (52), Expect = 0.34
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQK 230
E+E N K +KE K + S + D+ E SK +K
Sbjct: 44 EREQNSYKNEKEYRKYRERSKERSRDKRERERSKERK 80
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 0.60
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQK 230
E+E N K +KE K + S + DR E S+ K
Sbjct: 44 EREQNSYKNEKEYRKYRETSKERSRDRTERERSREPK 80
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.4 bits (48), Expect = 1.0
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 111 KFVFLTLPIPFCFVPRLLLVYPTTTWPW 28
+F+ PIP + P+L + + TWP+
Sbjct: 259 RFINWHEPIPEAYFPKLDSLVASRTWPF 286
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.2 bits (45), Expect = 2.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 274 YSSFLESPPLVTGNFFC 224
Y+SFL S +GN +C
Sbjct: 90 YNSFLSSDSASSGNVYC 106
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 3.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 120 EKELNREKKDKEAVKSQAESLNKEYDRLAEEHSKLQK 230
E+E K ++E K S + DR+ E SK K
Sbjct: 266 EREQKSYKNEREYRKYGKTSKERSRDRMERERSKEPK 302
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 4.2
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -1
Query: 108 FVFLTLPIPFCFVPRLLLVYPTTTWPWWSRS 16
F L L PF V ++ P TW W S
Sbjct: 322 FFILYLATPFVPVEPPDILMPALTWLGWINS 352
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 4.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 75 FVPRLLLVYPTTTWPWWSRSVPASC 1
FVP + Y T +PWWS + C
Sbjct: 514 FVP---VKYLTYEYPWWSHVLGWLC 535
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 4.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 75 FVPRLLLVYPTTTWPWWSRSVPASC 1
FVP + Y T +PWWS + C
Sbjct: 567 FVP---VKYLTYEYPWWSHVLGWLC 588
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 247 VVGILKKMNKCINLFCL 297
V+G++ M N FCL
Sbjct: 30 VIGLMNTMTHTTNAFCL 46
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 21.0 bits (42), Expect = 5.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 247 VVGILKKMNKCINLFCL 297
V+G++ M N FCL
Sbjct: 29 VIGLMNTMTHTTNAFCL 45
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 20.2 bits (40), Expect = 9.7
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 33 PWWSRSVPAS 4
PWW R P S
Sbjct: 75 PWWERYQPIS 84
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,379
Number of Sequences: 438
Number of extensions: 1771
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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