Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_G23
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.1  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   1.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   1.9  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   5.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +2

Query: 50  PPQLFGNDSTQNSKTKDSKLAPHVEPDMIADIVIPSL 160
           PP    +DS+ +S++ +S ++  V+P M A +V  +L
Sbjct: 441 PPLSPQSDSSSSSRSAESPMSVQVDP-MAASVVAAAL 476


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 173 LFIGNAFIVLIIYKYRKRKCEDLEDEFN 256
           +FI + F++LII+ Y       + D+ N
Sbjct: 8   MFIHSIFLILIIFIYSNETIAQVTDDEN 35


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 173 LFIGNAFIVLIIYKYRKRKCEDLEDEFN 256
           +FI + F++LII+ Y       + D+ N
Sbjct: 8   MFIHSIFLILIIFIYSNETIAQVTDDEN 35


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +3

Query: 180 SEMRSSFSSYINTGNENVKTLRMSSTPFH*A*TE---TSTVREMR 305
           +E  SS  SY+  G  N K  R SST  + + TE   +ST  +MR
Sbjct: 197 TEPSSSTKSYVLEGPRNGKRKRKSSTIENESETESNASSTKTKMR 241


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 214 FIYDENDERISDEQGRYQERRNHYICNHVGLD 119
           FI  +ND+   +   +YQE  N Y  N    D
Sbjct: 103 FIVVKNDDNFRNISEKYQEIFNGYFLNSESKD 134


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 376 ITRYGNPHC 402
           + RYG PHC
Sbjct: 588 VVRYGKPHC 596


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 376 ITRYGNPHC 402
           + RYG PHC
Sbjct: 626 VVRYGKPHC 634


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 366  LHPNNSIWQSTLY 404
            LHPNN++  S +Y
Sbjct: 1730 LHPNNTLLHSFMY 1742


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 366  LHPNNSIWQSTLY 404
            LHPNN++  S +Y
Sbjct: 1726 LHPNNTLLHSFMY 1738


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 151 NHYICNHVGLDVRSQF*IFCFAVLCRIVPEQLRRGCFF 38
           +H++  H G  +R +  I    VL  +V +++ R C F
Sbjct: 571 SHHL-THKGKPIRMRIGIHTGMVLAGVVGKKMPRYCLF 607


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,732
Number of Sequences: 438
Number of extensions: 3501
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)