Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_G19
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           48   3e-07
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   7.0  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   7.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.0  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.0  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 47.6 bits (108), Expect = 3e-07
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = +3

Query: 84  LPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAA--VNEDEDNSSS 221
           LP GW+ R +++ G TYY+N YTK +QW +P  PA   V +  +N+++
Sbjct: 163 LPRGWEERSAQN-GRTYYVNHYTKTTQWSRPTEPAGPPVRQSGNNNAA 209



 Score = 27.9 bits (59), Expect = 0.25
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 84  LPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 176
           LP GW+ RK+ S G  Y+++   + +Q+  P
Sbjct: 376 LPHGWEQRKTAS-GRVYFVDHNNRTTQFTDP 405



 Score = 26.2 bits (55), Expect = 0.75
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 78  DSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSP 185
           D+L  G    ++   G  Y+ +  TKQS W  P  P
Sbjct: 325 DALVNGNAEIRTTQQGQVYFYHIPTKQSTWHDPRIP 360


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -1

Query: 338 TFYNLYCFLLSASDF-LFTPGRWSAAFFVLHKY 243
           T  N Y F L+ SDF L   G     +F+  KY
Sbjct: 78  TATNYYLFSLAVSDFLLLVSGVPQEIYFIWSKY 110


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 415 LADEQSEYRRATSSNPTSRFTISVR 341
           +ADE  E  +   SN  ++FTI  R
Sbjct: 539 IADELQEISQVPKSNTLNKFTILAR 563


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 415 LADEQSEYRRATSSNPTSRFTISVR 341
           +ADE  E  +   SN  ++FTI  R
Sbjct: 539 IADELQEISQVPKSNTLNKFTILAR 563


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = +1

Query: 364 RSGSMKSR----VCTLIAHLLNAMVIWAVSRRDRCRSR 465
           RSG   SR      T+IA +  A  IWA S +  CR +
Sbjct: 752 RSGPRSSRRRIIANTIIAGIRYASSIWAESLKFECRKQ 789


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,710
Number of Sequences: 2352
Number of extensions: 11573
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)