Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_G15
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   1.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   5.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   5.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   6.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.8  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 15/60 (25%), Positives = 28/60 (46%)
 Frame = -2

Query: 432 AQPPEVAVVVLGRSRLTEHAVSEQI*RVSERQEHNLIDTHFIQLINLCLLVLRVSIRETD 253
           A PP  A+V+     +  + +S  + R +     N++ TH +  I   +LV    ++E D
Sbjct: 329 AYPPLAAIVLGAIGSIVFYIISRYVFRSALEDYCNIVATHLVCGILGSILVPFFYVQEDD 388


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +2

Query: 2   QREKSSVTLPPGTSSMEKISGSN 70
           + ++ +VTL PG++S+E+ S  +
Sbjct: 544 EMDRFAVTLRPGSNSIERQSSES 566


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +2

Query: 2   QREKSSVTLPPGTSSMEKISGSN 70
           + ++ +VTL PG++S+E+ S  +
Sbjct: 544 EMDRFAVTLRPGSNSIERQSSES 566


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 8   EKSSVTLPPGTSSMEKISGSNSV 76
           +K  +TL PG +++E+ S  +SV
Sbjct: 529 DKFPITLQPGKNTIEQKSTKSSV 551


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 151 HQPIIFRDGANPGFHEAVGDT 213
           H P ++ D  N     A+GD+
Sbjct: 604 HSPTMYGDALNANLQAALGDS 624


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 312 FIQLINLCLLVLRVSIRETDTT*MLR 235
           F+ L +LCLLV  V  +  D T + R
Sbjct: 9   FLFLASLCLLVQAVPNKVADKTYVTR 34


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 312 FIQLINLCLLVLRVSIRETDTT*MLR 235
           F+ L +LCLLV  V  +  D T + R
Sbjct: 9   FLFLASLCLLVQAVPNKVADKTYVTR 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,365
Number of Sequences: 438
Number of extensions: 3276
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)