Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_G10
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060368-1|AAL25407.1|  367|Drosophila melanogaster LD22570p pro...    30   2.1  
AF172257-1|AAF87943.1|  367|Drosophila melanogaster innexin 2 pr...    30   2.1  
AF137269-1|AAD50378.1|  367|Drosophila melanogaster gap junction...    30   2.1  
AE014298-988|AAN09193.1|  367|Drosophila melanogaster CG4590-PB,...    30   2.1  
AE014298-987|AAF46229.1|  367|Drosophila melanogaster CG4590-PA,...    30   2.1  

>AY060368-1|AAL25407.1|  367|Drosophila melanogaster LD22570p
           protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 416 NDLNENDKKTCCWSFFVNLIHYHTITLYRHYLM*CTNFYTNVLAQVFRV 562
           ND  +ND+K     +F+  ++ H    +R ++    NF  NV+ Q++ V
Sbjct: 151 NDECKNDRKKILVDYFIGNLNRHNFYAFRFFVCEALNF-VNVIGQIYFV 198


>AF172257-1|AAF87943.1|  367|Drosophila melanogaster innexin 2
           protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 416 NDLNENDKKTCCWSFFVNLIHYHTITLYRHYLM*CTNFYTNVLAQVFRV 562
           ND  +ND+K     +F+  ++ H    +R ++    NF  NV+ Q++ V
Sbjct: 151 NDECKNDRKKILVDYFIGNLNRHNFYAFRFFVCEALNF-VNVIGQIYFV 198


>AF137269-1|AAD50378.1|  367|Drosophila melanogaster gap junction
           protein prp33 protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 416 NDLNENDKKTCCWSFFVNLIHYHTITLYRHYLM*CTNFYTNVLAQVFRV 562
           ND  +ND+K     +F+  ++ H    +R ++    NF  NV+ Q++ V
Sbjct: 151 NDECKNDRKKILVDYFIGNLNRHNFYAFRFFVCEALNF-VNVIGQIYFV 198


>AE014298-988|AAN09193.1|  367|Drosophila melanogaster CG4590-PB,
           isoform B protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 416 NDLNENDKKTCCWSFFVNLIHYHTITLYRHYLM*CTNFYTNVLAQVFRV 562
           ND  +ND+K     +F+  ++ H    +R ++    NF  NV+ Q++ V
Sbjct: 151 NDECKNDRKKILVDYFIGNLNRHNFYAFRFFVCEALNF-VNVIGQIYFV 198


>AE014298-987|AAF46229.1|  367|Drosophila melanogaster CG4590-PA,
           isoform A protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 416 NDLNENDKKTCCWSFFVNLIHYHTITLYRHYLM*CTNFYTNVLAQVFRV 562
           ND  +ND+K     +F+  ++ H    +R ++    NF  NV+ Q++ V
Sbjct: 151 NDECKNDRKKILVDYFIGNLNRHNFYAFRFFVCEALNF-VNVIGQIYFV 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,371,809
Number of Sequences: 53049
Number of extensions: 505331
Number of successful extensions: 1396
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)