Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_G09
(456 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and coile... 30 3.3
AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune... 30 3.3
AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein. 30 3.3
AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and coile... 30 3.3
AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein. 30 3.3
AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein. 30 3.3
BC109046-1|AAI09047.1| 953|Homo sapiens ZNF518 protein protein. 29 7.6
BC109045-1|AAI09046.1| 953|Homo sapiens ZNF518 protein protein. 29 7.6
AK097999-1|BAC05213.1| 211|Homo sapiens protein ( Homo sapiens ... 29 7.6
AB002333-1|BAA20793.2| 1484|Homo sapiens KIAA0335 protein. 29 7.6
BC118915-1|AAI18916.1| 1406|Homo sapiens ARHGAP21 protein protein. 29 10.0
BC022931-1|AAH22931.1| 436|Homo sapiens ARHGAP21 protein protein. 29 10.0
AL392104-1|CAI40176.1| 1957|Homo sapiens Rho GTPase activating p... 29 10.0
AL355979-1|CAI14323.1| 1957|Homo sapiens Rho GTPase activating p... 29 10.0
AK074589-1|BAC11077.1| 208|Homo sapiens in. protein. 29 10.0
AF480466-1|AAM22955.1| 1957|Homo sapiens Rho-GTPase activating p... 29 10.0
AB037845-1|BAA92662.2| 1944|Homo sapiens KIAA1424 protein protein. 29 10.0
>BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 302 YIFTICTLSARYGIRVILNLHPSRPLTQ 219
+++ +CT+S R I+ IL L PSR T+
Sbjct: 145 FLYILCTMSIRQNIQKILGLAPSRAATK 172
>AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune
protein protein.
Length = 188
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 302 YIFTICTLSARYGIRVILNLHPSRPLTQ 219
+++ +CT+S R I+ IL L PSR T+
Sbjct: 145 FLYILCTMSIRQNIQKILGLAPSRAATK 172
>AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein.
Length = 188
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 302 YIFTICTLSARYGIRVILNLHPSRPLTQ 219
+++ +CT+S R I+ IL L PSR T+
Sbjct: 145 FLYILCTMSIRQNIQKILGLAPSRAATK 172
>AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 302 YIFTICTLSARYGIRVILNLHPSRPLTQ 219
+++ +CT+S R I+ IL L PSR T+
Sbjct: 145 FLYILCTMSIRQNIQKILGLAPSRAATK 172
>AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein.
Length = 230
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 302 YIFTICTLSARYGIRVILNLHPSRPLTQ 219
+++ +CT+S R I+ IL L PSR T+
Sbjct: 187 FLYILCTMSIRQNIQKILGLAPSRAATK 214
>AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein.
Length = 188
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 302 YIFTICTLSARYGIRVILNLHPSRPLTQ 219
+++ +CT+S R I+ IL L PSR T+
Sbjct: 145 FLYILCTMSIRQNIQKILGLAPSRAATK 172
>BC109046-1|AAI09047.1| 953|Homo sapiens ZNF518 protein protein.
Length = 953
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 126 THKPLLPVPPSSRIPLASGPSPPFALFI 209
T+KP LPV P + +PL + P +LF+
Sbjct: 415 TNKPGLPVIPGNALPLVNSQGIPASLFV 442
>BC109045-1|AAI09046.1| 953|Homo sapiens ZNF518 protein protein.
Length = 953
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 126 THKPLLPVPPSSRIPLASGPSPPFALFI 209
T+KP LPV P + +PL + P +LF+
Sbjct: 415 TNKPGLPVIPGNALPLVNSQGIPASLFV 442
>AK097999-1|BAC05213.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ40680 fis, clone THYMU2022922. ).
Length = 211
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 123 QTHKPLLPVPPSSRIPLASGPSPPFALFIVVK 218
Q H+ VPP + + GPSPP A+ + VK
Sbjct: 23 QLHRSPFTVPPRTPACRSPGPSPPIAVALEVK 54
>AB002333-1|BAA20793.2| 1484|Homo sapiens KIAA0335 protein.
Length = 1484
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 126 THKPLLPVPPSSRIPLASGPSPPFALFI 209
T+KP LPV P + +PL + P +LF+
Sbjct: 946 TNKPGLPVIPGNALPLVNSQGIPASLFV 973
>BC118915-1|AAI18916.1| 1406|Homo sapiens ARHGAP21 protein protein.
Length = 1406
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 90 CNKGGGCALTTQTHKPLLPVPPSS 161
CN G + T++PLL +PP S
Sbjct: 1342 CNTGSSSSTLASTNRPLLSIPPQS 1365
>BC022931-1|AAH22931.1| 436|Homo sapiens ARHGAP21 protein protein.
Length = 436
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 90 CNKGGGCALTTQTHKPLLPVPPSS 161
CN G + T++PLL +PP S
Sbjct: 372 CNTGSSSSTLASTNRPLLSIPPQS 395
>AL392104-1|CAI40176.1| 1957|Homo sapiens Rho GTPase activating
protein 21 protein.
Length = 1957
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 90 CNKGGGCALTTQTHKPLLPVPPSS 161
CN G + T++PLL +PP S
Sbjct: 1893 CNTGSSSSTLASTNRPLLSIPPQS 1916
>AL355979-1|CAI14323.1| 1957|Homo sapiens Rho GTPase activating
protein 21 protein.
Length = 1957
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 90 CNKGGGCALTTQTHKPLLPVPPSS 161
CN G + T++PLL +PP S
Sbjct: 1893 CNTGSSSSTLASTNRPLLSIPPQS 1916
>AK074589-1|BAC11077.1| 208|Homo sapiens in. protein.
Length = 208
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 90 CNKGGGCALTTQTHKPLLPVPPSS 161
CN G + T++PLL +PP S
Sbjct: 115 CNTGSSSSTLASTNRPLLSIPPQS 138
>AF480466-1|AAM22955.1| 1957|Homo sapiens Rho-GTPase activating
protein 10 protein.
Length = 1957
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 90 CNKGGGCALTTQTHKPLLPVPPSS 161
CN G + T++PLL +PP S
Sbjct: 1893 CNTGSSSSTLASTNRPLLSIPPQS 1916
>AB037845-1|BAA92662.2| 1944|Homo sapiens KIAA1424 protein protein.
Length = 1944
Score = 28.7 bits (61), Expect = 10.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 90 CNKGGGCALTTQTHKPLLPVPPSS 161
CN G + T++PLL +PP S
Sbjct: 1880 CNTGSSSSTLASTNRPLLSIPPQS 1903
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,503,321
Number of Sequences: 237096
Number of extensions: 1183032
Number of successful extensions: 4294
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4278
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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