Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_G06
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 134 5e-32
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 134 5e-32
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 123 7e-29
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 123 7e-29
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 100 7e-22
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 100 7e-22
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 100 7e-22
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 82 2e-16
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 82 2e-16
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 71 5e-13
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 71 5e-13
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 71 5e-13
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 61 4e-10
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 60 7e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 60 7e-10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 60 7e-10
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 60 7e-10
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 60 7e-10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 60 7e-10
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 60 7e-10
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 58 4e-09
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 58 5e-09
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 58 5e-09
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 58 5e-09
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 56 1e-08
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 56 2e-08
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 56 2e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 56 2e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 56 2e-08
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 54 8e-08
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 53 1e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 53 1e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 52 2e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 50 8e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 50 8e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 47 9e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 47 9e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 47 9e-06
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 46 1e-05
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 46 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 46 2e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 46 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 43 2e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 2e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 42 2e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 42 3e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 41 6e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 41 6e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 39 0.002
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 39 0.002
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.003
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 38 0.003
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 38 0.003
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.003
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.003
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.003
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 38 0.003
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 37 0.008
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 37 0.008
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 36 0.013
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.013
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.017
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.023
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 35 0.030
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 35 0.040
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.053
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.053
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.053
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 34 0.053
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 34 0.053
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 34 0.070
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.093
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 33 0.16
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 31 0.37
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.37
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.37
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.37
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.37
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 31 0.37
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 31 0.49
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 30 0.86
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 30 1.1
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 30 1.1
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.6
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 29 2.6
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 28 4.6
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 27 8.0
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 27 8.0
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 134 bits (323), Expect = 5e-32
Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Frame = +3
Query: 48 TDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESIN 227
TDN++NGN+ ++N G ++D+K+FVGG+S E ++++L HF+ YGE+
Sbjct: 4 TDNKINGNASE---TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQ 59
Query: 228 VKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSS 404
VK D GRSRGFAF+ F + +AA E TI K V+ K AK+R K+FVGGL S
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Query: 405 EISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+ S+ ++++ F FG + ++E PFDK R+ F FI
Sbjct: 120 DYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFI 156
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/88 (38%), Positives = 53/88 (60%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 308
+++K+FVGGL + S+++LR HF +G+++ I D T R FAFIVF+ +S DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 309 MAAGEHTINSKKVDPKKAKARHGKIFVG 392
+ + T +++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 134 bits (323), Expect = 5e-32
Identities = 65/157 (41%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Frame = +3
Query: 48 TDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESIN 227
TDN++NGN+ ++N G ++D+K+FVGG+S E ++++L HF+ YGE+
Sbjct: 4 TDNKINGNASE---TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQ 59
Query: 228 VKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSS 404
VK D GRSRGFAF+ F + +AA E TI K V+ K AK+R K+FVGGL S
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Query: 405 EISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+ S+ ++++ F FG + ++E PFDK R+ F FI
Sbjct: 120 DYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFI 156
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/88 (38%), Positives = 53/88 (60%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 308
+++K+FVGGL + S+++LR HF +G+++ I D T R FAFIVF+ +S DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 309 MAAGEHTINSKKVDPKKAKARHGKIFVG 392
+ + T +++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 123 bits (297), Expect = 7e-29
Identities = 57/149 (38%), Positives = 89/149 (59%), Gaps = 9/149 (6%)
Frame = +3
Query: 99 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 278
D+ + G D K+F+GGLSW+T+ + LRD+F +GE+ V DP T R+RGF FI
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 279 FKAPDSIDKVMAAGEHTINSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKN 431
F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+ + +++K
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 432 FFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
+F +G + + + FDK + +GF F+T
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVT 181
Score = 64.9 bits (151), Expect = 3e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Frame = +3
Query: 30 FAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDD------DRKLFVGGLSWETSDKELRD 191
F + D LN G D P R +K+F+GGLS ++ ++++
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 192 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
+F YG++E + D T R RGF F+ F + + DKV H IN K V+ KKA+ +
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 321 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRK 500
E +N+ D GK+F+GGLS + + + ++++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 501 GFCFIT 518
GF FIT
Sbjct: 87 GFGFIT 92
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 123 bits (297), Expect = 7e-29
Identities = 57/149 (38%), Positives = 89/149 (59%), Gaps = 9/149 (6%)
Frame = +3
Query: 99 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 278
D+ + G D K+F+GGLSW+T+ + LRD+F +GE+ V DP T R+RGF FI
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 279 FKAPDSIDKVMAAGEHTINSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKN 431
F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+ + +++K
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 432 FFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
+F +G + + + FDK + +GF F+T
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVT 181
Score = 64.9 bits (151), Expect = 3e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Frame = +3
Query: 30 FAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDD------DRKLFVGGLSWETSDKELRD 191
F + D LN G D P R +K+F+GGLS ++ ++++
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 192 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
+F YG++E + D T R RGF F+ F + + DKV H IN K V+ KKA+ +
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 321 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRK 500
E +N+ D GK+F+GGLS + + + ++++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 501 GFCFIT 518
GF FIT
Sbjct: 87 GFGFIT 92
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 100 bits (239), Expect = 7e-22
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Frame = +3
Query: 72 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 251
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 252 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 398
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 399 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
+ ++D + +F+ +G + + E+ DK + +GF F+T
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
F DS+D+ + H +N + D +K ++
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 100 bits (239), Expect = 7e-22
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Frame = +3
Query: 72 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 251
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 252 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 398
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 399 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
+ ++D + +F+ +G + + E+ DK + +GF F+T
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
F DS+D+ + H +N + D +K ++
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 100 bits (239), Expect = 7e-22
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Frame = +3
Query: 72 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 251
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 252 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 398
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 399 SSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
+ ++D + +F+ +G + + E+ DK + +GF F+T
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVT 161
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
F DS+D+ + H +N + D +K ++
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 82.2 bits (194), Expect = 2e-16
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Frame = +3
Query: 183 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 362
+R+ +S +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 363 KARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFC 509
R K ++V G+ + ++D + +F+ +G + + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 510 FIT 518
F+T
Sbjct: 121 FVT 123
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
F DS+D+ + H +N + D +K ++
Sbjct: 123 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 82.2 bits (194), Expect = 2e-16
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Frame = +3
Query: 183 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 362
+R+ +S +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 363 KARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFC 509
R K ++V G+ + ++D + +F+ +G + + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 510 FIT 518
F+T
Sbjct: 121 FVT 123
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
F DS+D+ + H +N + D +K ++
Sbjct: 123 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 70.9 bits (166), Expect = 5e-13
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Frame = +3
Query: 135 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 314
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 315 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 437
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 438 SNFGNIIEVEM 470
FG + +VE+
Sbjct: 169 ETFGTLDQVEI 179
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+T
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVT 96
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 70.9 bits (166), Expect = 5e-13
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Frame = +3
Query: 135 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 314
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 315 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 437
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 438 SNFGNIIEVEM 470
FG + +VE+
Sbjct: 189 ETFGTLDQVEI 199
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+T
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVT 116
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 70.9 bits (166), Expect = 5e-13
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Frame = +3
Query: 135 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 314
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 315 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 437
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 438 SNFGNIIEVEM 470
FG + +VE+
Sbjct: 190 ETFGTLDQVEI 200
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
K+F+GGLS + +D+++ N+FS +G +++ + D +GF F+T
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVT 117
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 111 EAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 290
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 291 DSIDKVMAAGEHTINSKKVD 350
D +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 60.5 bits (140), Expect = 7e-10
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 302
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 303 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 462 VEMPFDKTKNQRKGFCFIT 518
+ D+ R G F+T
Sbjct: 171 CSVLRDQDGKSR-GCAFVT 188
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 60.5 bits (140), Expect = 7e-10
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 302
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 303 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 462 VEMPFDKTKNQRKGFCFIT 518
+ D+ R G F+T
Sbjct: 171 CSVLRDQDGKSR-GCAFVT 188
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 60.5 bits (140), Expect = 7e-10
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 302
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 303 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 462 VEMPFDKTKNQRKGFCFIT 518
+ D+ R G F+T
Sbjct: 171 CSVLRDQDGKSR-GCAFVT 188
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 60.5 bits (140), Expect = 7e-10
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 302
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 303 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 462 VEMPFDKTKNQRKGFCFIT 518
+ D+ R G F+T
Sbjct: 171 CSVLRDQDGKSR-GCAFVT 188
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 60.5 bits (140), Expect = 7e-10
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 302
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 303 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 462 VEMPFDKTKNQRKGFCFIT 518
+ D+ R G F+T
Sbjct: 171 CSVLRDQDGKSR-GCAFVT 188
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 60.5 bits (140), Expect = 7e-10
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 302
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 303 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 462 VEMPFDKTKNQRKGFCFIT 518
+ D+ R G F+T
Sbjct: 171 CSVLRDQDGKSR-GCAFVT 188
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 60.5 bits (140), Expect = 7e-10
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
K+FVGGL + TSDK L ++F +G+IE V TD NT +SRG+ F+ K S ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 318 GEHTINSKKVD 350
I+ +K +
Sbjct: 96 PNPIIDGRKAN 106
Score = 40.7 bits (91), Expect = 6e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
KIFVGGL SD + +F FG+I E + D+ + +G+ F+T
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVT 82
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 58.0 bits (134), Expect = 4e-09
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Frame = +3
Query: 123 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 302
R+ D ++VGGL + S+ L + G + S+N+ D T +GF F+ F + D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 303 -KVMAAGEHTINSKKVDPKKAKARH------GKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
+ + K + KA A IFVG L E+ + + + FS FG I++
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
Query: 462 V-EMPFDKTKNQRKGFCFI 515
V ++ D KGF FI
Sbjct: 129 VPKIMRDVDSGTSKGFAFI 147
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 105 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI-NVKTDPNTGRSRGFAFIVF 281
SA D +FVG L E +K L D FSA+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 282 KAPDSIDKVMAA 317
+ ++ D + A
Sbjct: 150 ASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 58.0 bits (134), Expect = 4e-09
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Frame = +3
Query: 123 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 302
R+ D ++VGGL + S+ L + G + S+N+ D T +GF F+ F + D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 303 -KVMAAGEHTINSKKVDPKKAKARH------GKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
+ + K + KA A IFVG L E+ + + + FS FG I++
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
Query: 462 V-EMPFDKTKNQRKGFCFI 515
V ++ D KGF FI
Sbjct: 139 VPKIMRDVDSGTSKGFAFI 157
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 105 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI-NVKTDPNTGRSRGFAFIVF 281
SA D +FVG L E +K L D FSA+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 282 KAPDSIDKVMAA 317
+ ++ D + A
Sbjct: 160 ASFEASDTALEA 171
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 57.6 bits (133), Expect = 5e-09
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 302
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 303 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I +
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 462 VEMPFDKTKNQR 497
+ D+ R
Sbjct: 171 CSVLRDQDGKSR 182
Score = 35.5 bits (78), Expect = 0.023
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
K+FVG + + ++ + + F +G++ + DK+ KG CF+T
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVT 102
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 57.6 bits (133), Expect = 5e-09
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Frame = +3
Query: 51 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 215
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 136 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 195
Query: 216 ESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----- 380
E +++KT NT +AF++F+ D + A E + + K +GK
Sbjct: 196 EEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGYGKSQVSR 251
Query: 381 -IFVGGLSSEISDDEIKNFFSNFGNIIEVE 467
+FVGGL S + ++ F FG + ++
Sbjct: 252 RLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 57.6 bits (133), Expect = 5e-09
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Frame = +3
Query: 51 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 215
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 136 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 195
Query: 216 ESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----- 380
E +++KT NT +AF++F+ D + A E + + K +GK
Sbjct: 196 EEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGYGKSQVSR 251
Query: 381 -IFVGGLSSEISDDEIKNFFSNFGNIIEVE 467
+FVGGL S + ++ F FG + ++
Sbjct: 252 RLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 57.6 bits (133), Expect = 5e-09
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Frame = +3
Query: 51 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 215
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 113 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 172
Query: 216 ESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----- 380
E +++KT NT +AF++F+ D + A E + + K +GK
Sbjct: 173 EEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGYGKSQVSR 228
Query: 381 -IFVGGLSSEISDDEIKNFFSNFGNIIEVE 467
+FVGGL S + ++ F FG + ++
Sbjct: 229 RLFVGGLGSWCDKEILQKAFGEFGFVENID 258
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Frame = +3
Query: 117 PGRDDDR-KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 293
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ + D
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 294 S----------------IDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI 425
S +++ M +S+ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 426 KNFFSNFGNIIEV 464
+ F+ FG + EV
Sbjct: 141 RALFATFGELDEV 153
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 90 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFA 269
D A + DD+KLF+G LS + S+ E+R F+ +GE++ + V + G S+G A
Sbjct: 109 DTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCA 167
Query: 270 FIVFK 284
F+ +K
Sbjct: 168 FVKYK 172
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
K+FVG + + + ++++ F FG I E + DK KG F+T
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLT 76
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Frame = +3
Query: 117 PGRDDDR-KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 293
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ + D
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 294 S----------------IDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI 425
S +++ M +S+ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 426 KNFFSNFGNIIEV 464
+ F+ FG + EV
Sbjct: 141 RALFATFGELDEV 153
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 90 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFA 269
D A + DD+KLF+G LS + S+ E+R F+ +GE++ + V + G S+G A
Sbjct: 109 DTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCA 167
Query: 270 FIVFK 284
F+ +K
Sbjct: 168 FVKYK 172
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
K+FVG + + + ++++ F FG I E + DK KG F+T
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLT 76
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 56.0 bits (129), Expect = 2e-08
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 317
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 318 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 476
++ K + DP ++ G IF+ L I + I + FS FGNI+ ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 477 DKTKNQRKGFCFI 515
D+ KG+ F+
Sbjct: 154 DE-DGFSKGYGFV 165
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPK 356
F+ P+ + +NSK V K
Sbjct: 363 CFEKPEEATSAVT----EMNSKMVCSK 385
Score = 35.9 bits (79), Expect = 0.017
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 26/133 (19%)
Frame = +3
Query: 195 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-VMAAGEHTINSKKVD-----PK 356
F+ +G I S V T G+S+GF F+ F P+ + V A + TI + +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 357 KAKARHGKI--------------------FVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 476
K RH ++ +V L + DD +K F ++GNI ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 477 DKTKNQRKGFCFI 515
D+ + KGF F+
Sbjct: 351 DE-NGRSKGFGFV 362
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/133 (27%), Positives = 64/133 (48%)
Frame = +3
Query: 39 DITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIE 218
+I N++N G G + D +++GGLS+ S+ ++ FS YGE+
Sbjct: 6 NIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVM 65
Query: 219 SINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGL 398
+IN+ D +TG+S+GFAF+ +K D ++A N + + + H + +
Sbjct: 66 NINLIRDKDTGKSKGFAFLCYK--DQRSTILAV--DNFNGISLHKRMIRVDHVEEYKVPK 121
Query: 399 SSEISDDEIKNFF 437
E +DDE K +
Sbjct: 122 YKEDADDETKRLW 134
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
I++GGLS +S+ ++ FS +G ++ + + DK + KGF F+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFL 84
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 56.0 bits (129), Expect = 2e-08
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 317
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 318 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 476
++ K + DP ++ G IF+ L I + I + FS FGNI+ ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 477 DKTKNQRKGFCFI 515
D+ KG+ F+
Sbjct: 154 DE-DGFSKGYGFV 165
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPK 356
F+ P+ + +NSK V K
Sbjct: 363 CFEKPEEATSAVT----EMNSKMVCSK 385
Score = 35.9 bits (79), Expect = 0.017
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 26/133 (19%)
Frame = +3
Query: 195 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-VMAAGEHTINSKKVD-----PK 356
F+ +G I S V T G+S+GF F+ F P+ + V A + TI + +
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 357 KAKARHGKI--------------------FVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 476
K RH ++ +V L + DD +K F ++GNI ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 477 DKTKNQRKGFCFI 515
D+ + KGF F+
Sbjct: 351 DE-NGRSKGFGFV 362
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 317
L++G L + S+ L + FS G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 318 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 476
I+ + + DP +A +G IF+ L I + + + FS FGNI+ ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 477 DKTKNQRKGFCFI 515
D N KG+ F+
Sbjct: 179 DDEGNS-KGYGFV 190
Score = 51.6 bits (118), Expect = 3e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 320
L+V + + +D LRDHFS++G I S V D N GRS+GF F+ F+ P+ A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEE----ATAA 399
Query: 321 EHTINSKKVDPK 356
+NSK + K
Sbjct: 400 VTDMNSKMIGAK 411
Score = 47.6 bits (108), Expect = 5e-06
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Frame = +3
Query: 114 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK--- 284
A R + +F+ L +K + D FS +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 285 -APDSIDKV--MAAGEHTINSKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIKN 431
A +I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 432 FFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
FS FG I + D + + KGF F+
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFV 283
Score = 38.7 bits (86), Expect = 0.002
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI------- 299
+FV ++L FS +GEI S V TD G+ +GF F+ F D+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 300 -DKVMAAGEHTINSKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 422
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 423 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+++ FS+FG I ++ D+ + KGF F+
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFV 388
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 317
L++G L + S+ L + FS G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 318 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 476
I+ + + DP +A +G IF+ L I + + + FS FGNI+ ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 477 DKTKNQRKGFCFI 515
D N KG+ F+
Sbjct: 179 DDEGNS-KGYGFV 190
Score = 51.6 bits (118), Expect = 3e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 320
L+V + + +D LRDHFS++G I S V D N GRS+GF F+ F+ P+ A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEE----ATAA 399
Query: 321 EHTINSKKVDPK 356
+NSK + K
Sbjct: 400 VTDMNSKMIGAK 411
Score = 47.6 bits (108), Expect = 5e-06
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Frame = +3
Query: 114 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK--- 284
A R + +F+ L +K + D FS +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 285 -APDSIDKV--MAAGEHTINSKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIKN 431
A +I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 432 FFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
FS FG I + D + + KGF F+
Sbjct: 257 MFSKFGEITSAVVMTD-AQGKPKGFGFV 283
Score = 38.7 bits (86), Expect = 0.002
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI------- 299
+FV ++L FS +GEI S V TD G+ +GF F+ F D+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 300 -DKVMAAGEHTINSKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 422
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 423 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+++ FS+FG I ++ D+ + KGF F+
Sbjct: 359 LRDHFSSFGTITSAKVMVDE-NGRSKGFGFV 388
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 25/151 (16%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 296
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 297 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 422
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 423 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+K+ F FG I++ ++ T +GF ++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYL 253
Score = 31.1 bits (67), Expect = 0.49
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 314
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 25/151 (16%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 296
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 297 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 422
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 423 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+K+ F FG I++ ++ T +GF ++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYL 253
Score = 31.1 bits (67), Expect = 0.49
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 314
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 25/151 (16%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 296
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 297 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 422
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 423 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+K+ F FG I++ ++ T +GF ++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYL 253
Score = 31.1 bits (67), Expect = 0.49
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 314
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 54.8 bits (126), Expect = 4e-08
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Frame = +3
Query: 84 GGDGQDNSAEAPGRDDDR-KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSR 260
G DG+ A RD L V G+ ++T+D+ + +F G + +K + G S+
Sbjct: 155 GRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSK 213
Query: 261 GFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARH-------GKIFVGGLSSEISDD 419
GF F+ + +KV+A +H I+ ++ D K R +IFVG L+ ++ +
Sbjct: 214 GFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEH 273
Query: 420 EIKNFFSNFG-NIIEVEMPFDK-TKNQRKGFCFIT 518
+++ F + + IE + D +GF F+T
Sbjct: 274 QLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVT 308
Score = 37.5 bits (83), Expect = 0.006
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +3
Query: 90 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFS--AYGEIESINVKTDPNTGRS-R 260
DG+D GR ++FVG L+ + + +LR F A IE+ V TD + R
Sbjct: 248 DGRDKQ----GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFR 302
Query: 261 GFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
GFAF+ + ++ +++++ G T+N V A+ R
Sbjct: 303 GFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 53.6 bits (123), Expect = 8e-08
Identities = 20/81 (24%), Positives = 44/81 (54%)
Frame = +3
Query: 105 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK 284
+AE + D R ++VG + W+++ E+ +HF+ G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 285 APDSIDKVMAAGEHTINSKKV 347
+S+ + ++K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 53.2 bits (122), Expect = 1e-07
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Frame = +3
Query: 84 GGDGQDNSAEAPG-RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSR 260
GG D A G +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 261 GFAFIVF-KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI---- 425
G+AF+ + D+ H I++ K + ++F+G + S DEI
Sbjct: 242 GYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEEL 301
Query: 426 KNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
K ++I +P D K + +GFCF+
Sbjct: 302 KTHAEGVVDVIVYSVP-DNEKIKNRGFCFV 330
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +3
Query: 102 NSAEAPGRDDD--RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
N AE P +D R LFVG +++ETS+ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 276 VF 281
+
Sbjct: 150 EY 151
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 52.4 bits (120), Expect = 2e-07
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Frame = +3
Query: 114 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGR-SRGFAFIVF--- 281
APG +D R +FV L + T++ E+R A + SI N+ RGFA++V
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 282 -KAPDSI--DKVMAAGEHTINSKKVDPKK-------AKARHGKIFVGGLSSEISDDEIKN 431
KA ++ D+V G S DP+K K+FV + + +DDE+K
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISAN-DPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKA 701
Query: 432 FFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
FS FG + V K + KG F+
Sbjct: 702 LFSKFGTVTSVRRVTHK-DGKPKGIAFV 728
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 51.2 bits (117), Expect = 4e-07
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +3
Query: 66 GNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPN 245
G GGG G++ + + L V LS T++K+LRD F +GEI ++ D
Sbjct: 53 GGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRP 112
Query: 246 TGRSRGFAFIVF 281
+G SRGF FI F
Sbjct: 113 SGNSRGFGFIYF 124
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 387 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
V LSS ++ ++++ F FG I + ++ +D+ +GF FI
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFI 122
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 50.8 bits (116), Expect = 6e-07
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA- 317
+FVG LS + S++ L+ F+ +GE+ V D T +S+G+ F+ F + + +A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 318 -----GEHTI--------NSKKVDPK--------KAKARHGKIFVGGLSSEISDDEIKNF 434
G+ + NS++ K KA + ++VG +S + +D ++++
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 435 FSNFGNIIEVEM 470
FS +G+I EV +
Sbjct: 257 FSTYGDIAEVRI 268
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/65 (26%), Positives = 39/65 (60%)
Frame = +3
Query: 324 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKG 503
H+ + ++ + ++H +FVG LS ++S++ +K+ F+ FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 504 FCFIT 518
+ F++
Sbjct: 178 YGFVS 182
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINV 230
D+ ++VG +S +T+D +LRD FS YG+I + +
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 50.8 bits (116), Expect = 6e-07
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 24/164 (14%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVK-------------- 233
Q ++A A ++ +FVG + ++K +R FS +G I S+ ++
Sbjct: 130 QKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVT 189
Query: 234 --TDPNTGRSRGFAFIV-FKAPDSIDKVMAAG-----EHTINSKKVDPKKAK-ARHGKIF 386
T + F V F A +S++K + +H I KV KK + + IF
Sbjct: 190 HLTGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIF 249
Query: 387 VGGLSSEISDDEIKNFFS-NFGNIIEVEMPFDKTKNQRKGFCFI 515
VG L EI++D + FFS G + V + DK + KGF F+
Sbjct: 250 VGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFV 293
Score = 50.8 bits (116), Expect = 6e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 132 DRKLFVGGLSWETSDKELRDHFSAY-GEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 308
D +FVG L +E ++ L FSA G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 309 MAAGEHTINSKKVDPKKAK 365
+A TI +K D + K
Sbjct: 303 LALSMETIKMEKRDLRITK 321
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 50.8 bits (116), Expect = 6e-07
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSIDKVMAA 317
L + L + +E+R F++ GEIES + D TG+S G+ F+ + + D++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 318 GEHTINSKKVD-----PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 482
+ +K + P + + ++V G+ ++ E+++ F FG II + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 483 TKNQRKGFCFI 515
KG F+
Sbjct: 164 VTGLSKGVGFV 174
Score = 34.3 bits (75), Expect = 0.053
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
+FV LSS+ D + FS FG I+ V++ D T+ Q KG+ F++
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVS 420
Score = 33.9 bits (74), Expect = 0.070
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 302
L+V G+ + EL F +G+I + + +D TG S+G F+ F D D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 50.4 bits (115), Expect = 8e-07
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF--------- 281
D R L + ++ +T ++L + FSA G + + + TD TGRS+G ++ F
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 82
Query: 282 ---------KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----IFVGGLSSEISDDE 422
AP I + A NS A K + V L +I +
Sbjct: 83 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 142
Query: 423 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
I++ F +FG I ++++ D + R GF IT
Sbjct: 143 IRDIFESFGRIEKIDLEVDSNRENR-GFATIT 173
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +3
Query: 114 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 293
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ D
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 294 SIDK 305
K
Sbjct: 179 DAQK 182
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 50.4 bits (115), Expect = 8e-07
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF--------- 281
D R L + ++ +T ++L + FSA G + + + TD TGRS+G ++ F
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLG 227
Query: 282 ---------KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----IFVGGLSSEISDDE 422
AP I + A NS A K + V L +I +
Sbjct: 228 LALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKM 287
Query: 423 IKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
I++ F +FG I ++++ D + R GF IT
Sbjct: 288 IRDIFESFGRIEKIDLEVDSNRENR-GFATIT 318
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +3
Query: 114 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 293
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ D
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 294 SIDK 305
K
Sbjct: 324 DAQK 327
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 311
++VG ++T+++EL + FS+ G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
++VG + +++E+ NFFS+ G I V + D+ + +GF FI
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFI 51
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +3
Query: 111 EAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 290
E D + ++VG + + + +E+ HF G + + ++ D +G +GFA++ F
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEK 129
Query: 291 DSIDKVMAAGEHTINSK--KVDPKK 359
+ + +A + + + KVDPK+
Sbjct: 130 EGMQNALAMTDSLLRGRQIKVDPKR 154
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 354 KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+KA+A ++VG + + +EI+ F G++ V + D+ KGF ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYV 124
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 49.2 bits (112), Expect = 2e-06
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Frame = +3
Query: 120 GRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF------ 281
G D+ R L+VG L ++ + F+ G + V D G + +AF+ F
Sbjct: 41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97
Query: 282 -KAPDSIDKVMAAGEHTINSKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIKNFFSN 443
+A +++K + + V+P + ++ RH +FVG LSSE+ + +++ F
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157
Query: 444 FGNIIEVEMPFDKTKNQRKGFCFIT 518
FG++ + ++ D + KG+ F++
Sbjct: 158 FGDVSDAKVIRDTNTTKSKGYGFVS 182
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 314
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 315 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 422
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 423 IKNFFSNFGNIIEVEM 470
I+ F++FG I EV +
Sbjct: 256 IRQGFASFGRITEVRI 271
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 314
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 315 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 422
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 423 IKNFFSNFGNIIEVEM 470
I+ F++FG I EV +
Sbjct: 143 IRQGFASFGRITEVRI 158
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = +3
Query: 369 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F++
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS 69
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 314
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 315 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 422
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 423 IKNFFSNFGNIIEVEM 470
I+ F++FG I EV +
Sbjct: 153 IRQGFASFGRITEVRI 168
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = +3
Query: 369 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F++
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS 79
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 314
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 315 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 422
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 423 IKNFFSNFGNIIEVEM 470
I+ F++FG I EV +
Sbjct: 224 IRQGFASFGRITEVRI 239
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = +3
Query: 369 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
RH +FVG LSSE+ + +++ F FG++ + ++ D + KG+ F++
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVS 150
Score = 31.1 bits (67), Expect = 0.49
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTK 488
++VG L S +++D I F+ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 46.8 bits (106), Expect = 9e-06
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 320
L++ GL T+D LR+ S YG I S D T +G+ F+ F++P + AA
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP----QAAAAA 164
Query: 321 EHTINSKKVDPKKAKARHGK-----IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKT 485
+N++ V + AK + + +++ L + ++ ++ + FG +I +
Sbjct: 165 VDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRI-LRTP 223
Query: 486 KNQRKGFCF 512
NQ +G F
Sbjct: 224 DNQSRGVGF 232
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+++ GL +DD ++ S +GNI + DK N KG+ F+
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFV 153
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 46.8 bits (106), Expect = 9e-06
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 320
L++ GL T+D LR+ S YG I S D T +G+ F+ F++P + AA
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP----QAAAAA 138
Query: 321 EHTINSKKVDPKKAKARHGK-----IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKT 485
+N++ V + AK + + +++ L + ++ ++ + FG +I +
Sbjct: 139 VDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRI-LRTP 197
Query: 486 KNQRKGFCF 512
NQ +G F
Sbjct: 198 DNQSRGVGF 206
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+++ GL +DD ++ S +GNI + DK N KG+ F+
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFV 127
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPK 356
F+ P+ + +NSK V K
Sbjct: 303 CFEKPEEATSAVT----EMNSKMVCSK 325
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 311
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 35.9 bits (79), Expect = 0.017
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 26/133 (19%)
Frame = +3
Query: 195 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-VMAAGEHTINSKKVD-----PK 356
F+ +G I S V T G+S+GF F+ F P+ + V A + TI + +
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 357 KAKARHGKI--------------------FVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 476
K RH ++ +V L + DD +K F ++GNI ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 477 DKTKNQRKGFCFI 515
D+ + KGF F+
Sbjct: 291 DE-NGRSKGFGFV 302
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.8 bits (106), Expect = 9e-06
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 276 VFKAPDSIDKVMAAGEHTINSKKVDPK 356
F+ P+ + +NSK V K
Sbjct: 300 CFEKPEEATSAVT----EMNSKMVCSK 322
Score = 35.9 bits (79), Expect = 0.017
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 26/133 (19%)
Frame = +3
Query: 195 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK-VMAAGEHTINSKKVD-----PK 356
F+ +G I S V T G+S+GF F+ F P+ + V A + TI + +
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 357 KAKARHGKI--------------------FVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 476
K RH ++ +V L + DD +K F ++GNI ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 477 DKTKNQRKGFCFI 515
D+ + KGF F+
Sbjct: 288 DE-NGRSKGFGFV 299
Score = 34.3 bits (75), Expect = 0.053
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 348 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
DP ++ G IF+ L I + I + FS FGNI+ ++ D+ KG+ F+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFV 102
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 120 GRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK-APDS 296
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ D+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 297 IDKVMAAGEHTINSKKV 347
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 120 GRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK-APDS 296
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ D+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 297 IDKVMAAGEHTINSKKV 347
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/45 (37%), Positives = 31/45 (68%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+FVG +S ++S+D I++ FS GN++ ++M D+ + KG+ FI
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFI 64
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 120 GRD-DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 281
G D R +FVG +S++ S+ +R FS G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 281
++VG + ++ +++E+ ++F+A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 35.5 bits (78), Expect = 0.023
Identities = 12/45 (26%), Positives = 29/45 (64%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
++VG + + +++EI N+F+ G++ V + +D+ + +GF F+
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFV 52
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
++FVGG T++ ELR+HF + ++ + + + G+S+G+ FI F+ D +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 318 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIK 428
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
+IFVGG + ++ E++ F F + +V+M Q KG+ FIT
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFIT 112
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
++FVGG T++ ELR+HF + ++ + + + G+S+G+ FI F+ D +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 318 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIK 428
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
+IFVGG + ++ E++ F F + +V+M Q KG+ FIT
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFIT 113
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 281
++VG ++T++ +L ++FS G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
++VG + ++D++ N+FS GN+ V + D+ + +GF F+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFV 50
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 44.8 bits (101), Expect = 4e-05
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Frame = +3
Query: 114 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 293
A G +D R LFV L +D+ L F+ G + + + G + +AF+ F +
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHN 89
Query: 294 SIDKVMAA--GEHTINSKK-----VDP--------KKAKARHGKIFVGGLSSEISDDEIK 428
+ + G + + +P K +RH +FVG L SEI +++
Sbjct: 90 QATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149
Query: 429 NFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
F FG + E ++ D N+ KG+ F++
Sbjct: 150 EAFVKFGEVSEAKIIRDNNTNKGKGYGFVS 179
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 311
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + + ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 324 HTINSKKVDP--KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEV 464
H + K D +A A + ++VG +++ + +DEI+ F FG I EV
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEV 284
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 75 EHGGGDGQDNSAEAPGRD---DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPN 245
EHG + E R+ + +LF+ L + T + +L+ F YGE+ + V D
Sbjct: 256 EHGASLESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKK 315
Query: 246 TGRSRGFAFIVFKAPDS 296
TG +GFA + F P++
Sbjct: 316 TGACKGFAIVEFVFPEA 332
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
+L V L ++++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 318 GEHT-INSKKVDPKKAK 365
T NSKK+ ++ +
Sbjct: 63 SNQTFFNSKKLTVEECR 79
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +3
Query: 123 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 302
R D+ V L E ++ ELRD F G + I + D TG +GFAF+ F++ D
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 303 KVMA 314
+ +A
Sbjct: 232 RAIA 235
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 387 VGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
V L E+++DE+++ F G +I + + DK KGF F+T
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVT 223
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/73 (23%), Positives = 36/73 (49%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 308
D + +F+G + + ++ +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 309 MAAGEHTINSKKV 347
+ S+ +
Sbjct: 113 LVMNGSLFRSRPI 125
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +3
Query: 87 GDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGF 266
G G D A AP + L + LS++T+ +LR F YG+I +++ D + +S+GF
Sbjct: 4 GGGGDRRA-APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGF 62
Query: 267 AFIVF 281
F+ F
Sbjct: 63 GFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +3
Query: 87 GDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGF 266
G G D A AP + L + LS++T+ +LR F YG+I +++ D + +S+GF
Sbjct: 4 GGGGDRRA-APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGF 62
Query: 267 AFIVF 281
F+ F
Sbjct: 63 GFVRF 67
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 135 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 281
R L+VGG + + ++K L F +G++ +I++ D +G+ RGF F+ F
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
Score = 36.3 bits (80), Expect = 0.013
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +3
Query: 369 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
R ++VGG + ++++ + F FG+++ + +P D + +GF F+
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFV 57
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/115 (19%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Frame = +3
Query: 21 TNIFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRK------LFVGGLSWETSDKE 182
+N F +I ++ + ++ +++A P ++++K +F+G + + ++ +E
Sbjct: 17 SNSFEMEIEAESAILEQIQNKMAKNLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEE 76
Query: 183 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKV 347
+ +HF G I + D T + + FA+I F SI+ + S+ +
Sbjct: 77 VEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPI 131
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 117 PGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 296
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + +S
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 297 IDKVMAA-GEHTINSKKVDPKKAKARHGKI 383
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 117 PGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 296
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + +S
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 297 IDKVMAA-GEHTINSKKVDPKKAKARHGKI 383
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 99 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 278
D S + D R+L V + ++ + +L F G + ++V+ N S+GF F+
Sbjct: 88 DRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVT 145
Query: 279 FKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 380
+ PD D+ A TI ++V+ A R H K
Sbjct: 146 MQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 320
+FV + E ++ ++ D FS YG+I++I++ D TG +G+A + ++ ++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 321 EHT 329
T
Sbjct: 117 NDT 119
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+FV + E ++D++ + FS +G I + + D+ KG+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALV 101
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 99 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 278
D S + D R+L V + ++ + +L F G + ++V+ N S+GF F+
Sbjct: 88 DRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVT 145
Query: 279 FKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 380
+ PD D+ A TI ++V+ A R H K
Sbjct: 146 MQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +3
Query: 126 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 305
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 306 VMA 314
+A
Sbjct: 347 AIA 349
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCF 512
KIF+GGL + +++D++K +FG + + D N KG+ F
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAF 335
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/102 (23%), Positives = 41/102 (40%)
Frame = +3
Query: 192 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 372 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR 497
K+FVGG+S ++ I FF FG + V+ P + N R
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSR 244
Score = 35.1 bits (77), Expect = 0.030
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 34/161 (21%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 296
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 297 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 395
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 396 LSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
L ++ +EI FS FG ++ V + D+ KG +T
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVT 366
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/102 (23%), Positives = 41/102 (40%)
Frame = +3
Query: 192 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 372 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR 497
K+FVGG+S ++ I FF FG + V+ P + N R
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSR 244
Score = 35.1 bits (77), Expect = 0.030
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 34/161 (21%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 296
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 297 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 395
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 396 LSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
L ++ +EI FS FG ++ V + D+ KG +T
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVT 366
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +3
Query: 126 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 305
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 306 VMA 314
+A
Sbjct: 347 AIA 349
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCF 512
KIF+GGL + +++D++K +FG + + D N KG+ F
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAF 335
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +3
Query: 126 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 305
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 306 VMA 314
+A
Sbjct: 322 AIA 324
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCF 512
KIF+GGL + +++D++K +FG + + D N KG+ F
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAF 310
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +3
Query: 126 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 305
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 306 VMA 314
+A
Sbjct: 325 AIA 327
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCF 512
KIF+GGL + +++D++K +FG + + D N KG+ F
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAF 313
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/102 (23%), Positives = 41/102 (40%)
Frame = +3
Query: 192 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 371
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 372 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR 497
K+FVGG+S ++ I FF FG + V+ P + N R
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSR 244
Score = 35.1 bits (77), Expect = 0.030
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 34/161 (21%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 296
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 297 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 395
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 396 LSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
L ++ +EI FS FG ++ V + D+ KG +T
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVT 366
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 153 GLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTI 332
GL WE +++ELRD F G IES+ + GR+ G A +VF + + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 333 NSKKVD 350
S+ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 153 GLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTI 332
GL WE +++ELRD F G IES+ + GR+ G A +VF + + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 333 NSKKVD 350
S+ ++
Sbjct: 68 GSRYIE 73
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 36.3 bits (80), Expect = 0.013
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
+LFVG L E + EL++ FS +G+I + +GFAF+ D+ +A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRL---DTRAHAESA 166
Query: 318 GEHTINSKKVDPKKAKAR---HG-KIFVGGLSSEISDDEIKNFFSNFGNI 455
E I+ + + ++ + R HG I V LS +S++ + + FS+FG++
Sbjct: 167 KE-AIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDV 215
Score = 34.3 bits (75), Expect = 0.053
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 351 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 36.3 bits (80), Expect = 0.013
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
+LFVG L E + EL++ FS +G+I + +GFAF+ D+ +A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRL---DTRAHAESA 166
Query: 318 GEHTINSKKVDPKKAKAR---HG-KIFVGGLSSEISDDEIKNFFSNFGNI 455
E I+ + + ++ + R HG I V LS +S++ + + FS+FG++
Sbjct: 167 KE-AIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDV 215
Score = 34.3 bits (75), Expect = 0.053
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 351 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 290
+ + +F+ LS++T ++ +++ S +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 35.9 bits (79), Expect = 0.017
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
++VG LS +D++ F G++ V M D+ K GFCF+
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFV 83
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/85 (20%), Positives = 39/85 (45%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 320
L+VG LS+ T + ++ + F G++ + + D GF F+ + + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 321 EHTINSKKVDPKKAKARHGKIFVGG 395
I++ ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 473
K+FVGGL S + + +I NFFS +G ++V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 135 RKLFVGGLSWETSDKELRDHFSAYGEIE 218
RK+FVGGL + ++ + FS YG ++
Sbjct: 88 RKVFVGGLPSCVKESDILNFFSRYGRLQ 115
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 372 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
H +F+GGL ++ +EI FS FG ++ V + D+ KG +T
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVT 152
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 34.7 bits (76), Expect = 0.040
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +3
Query: 63 NGNSEHGGGDGQDNSA---EAPGRDD-----DRKLFVGGLSWETSDKELRDHFSAYG 209
N EHG + ++ E P RD RK+FVGG+ W+ ++ L+D F +G
Sbjct: 263 NFQQEHGNKNRDSDATWFGELPPRDYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 473
KIFVGG+ +I++ +K+ F FG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.053
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 305
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+FV L+ +D++++ FS FG I E+ D+ + FI
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFI 287
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.053
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 305
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+FV L+ +D++++ FS FG I E+ D+ + FI
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFI 287
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 34.3 bits (75), Expect = 0.053
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 141 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 305
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFI 515
+FV L+ +D++++ FS FG I E+ D+ + FI
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFI 218
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 34.3 bits (75), Expect = 0.053
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKELRDHFSAYGEIESI-----NVKTD-----PNTGRSRGFAFIV 278
DDRK+ V +S + + +L+ FS YG+I S KT P R+ G A I
Sbjct: 110 DDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATIT 169
Query: 279 FKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDD 419
FK + D+ A + K D + + GG +SDD
Sbjct: 170 FKKSEHADRAKNANPEEL--KFYDQVMVVSAYVSKKRGGKGLVLSDD 214
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 34.3 bits (75), Expect = 0.053
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 351 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 461
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEI 215
+LFVG L E + EL++ FS +G+I
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI 142
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.070
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +3
Query: 51 DNQLNGNSEHGGGDGQDNSA-EAPGRDDDRK-LFVGGLSWETSDKELRDHFSAYGEIES- 221
D +G GGG N + GR + ++ +FV G+S ++ + D FS G+I
Sbjct: 171 DGPPSGGGYGGGGAASGNREFGSDGRVELKETVFVQGISTTANEAYIADVFSTCGDIAKN 230
Query: 222 -----INVKTDPNTGRSRGFAFIVF 281
I + TD NTG +G I F
Sbjct: 231 DRGPRIKIYTDRNTGEPKGECMITF 255
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.5 bits (73), Expect = 0.093
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 96 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 275
Q+ A+ P + +R L++ L ++ + +E+ + F +G + I V NT +RG AF+
Sbjct: 7 QNRGAKLPP-EVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFV 62
Query: 276 VFK 284
V++
Sbjct: 63 VYE 65
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 32.7 bits (71), Expect = 0.16
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Frame = +3
Query: 129 DDRKLFVGGLSWET-------SDKELRDHFSAYGEIESI----NVKTDPNTGRSRGFAFI 275
++RK+++GG++ E ++ E++ F YGEIE + V PN FAFI
Sbjct: 324 NERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFI 383
Query: 276 VFKAPDSIDKVMAA 317
+ + + A
Sbjct: 384 TMRNKAGVKAIFEA 397
Score = 31.9 bits (69), Expect = 0.28
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Frame = +3
Query: 360 AKARHGKIFVGGLSSEI-------SDDEIKNFFSNFGNIIEVEMP---FDKTKNQRK-GF 506
A KI++GG++ EI ++ EIK F +G I EV MP D + K F
Sbjct: 321 ANLNERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAF 380
Query: 507 CFIT 518
FIT
Sbjct: 381 AFIT 384
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = +3
Query: 129 DDRKLFVGGLSWETSDKEL-RDHFSAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 284
++R+++VG + ++ ++KEL D + Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 31.5 bits (68), Expect = 0.37
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Frame = +3
Query: 45 TTDNQLNGN-SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDK--ELRDHFSAYGEI 215
+T++ +GN S+ G D + E D+ G S+E ++ ++ D FSA E+
Sbjct: 223 STNSDEDGNGSDEGDEDSTEKKKEEVVEKDEES---GDESFEKAEIFFKMDDAFSA--EM 277
Query: 216 ESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG------ 377
+ DP+TG GF+F+ D+ A + N KK++P ++KA
Sbjct: 278 KERKDGDDPSTG---GFSFLSMIGRKYDDE--AVEDDGENLKKIEPTQSKAEPSGNVDKI 332
Query: 378 -------KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 482
K+ +SD++IK+ +NF VE DK
Sbjct: 333 EKSLLKVKVSTKFFVDPLSDEKIKSLAANFRRTQTVEKVIDK 374
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 464
+I++G L+S +S+ +I++FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 30.3 bits (65), Expect = 0.86
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 318 GEHTINSKKVDPKKAKARHGKIFVGG 395
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 464
+I++G L+S +S+ +I++FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 30.3 bits (65), Expect = 0.86
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 318 GEHTINSKKVDPKKAKARHGKIFVGG 395
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.37
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 464
+I++G L+S +S+ +I++FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 30.3 bits (65), Expect = 0.86
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 318 GEHTINSKKVDPKKAKARHGKIFVGG 395
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 306 VMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSSEISDDEIKNFFSNFGNII 458
+M + + + K P A+ + K+F+GGL ++S++++ F FG ++
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +3
Query: 126 DDDRKLFVGGLSWETSDKELRDHFSA-YGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 302
D R +F+GG+ T ++L YG++ + + DP +G A + F +
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 303 KVMAAG----EHTINSKKVDPK 356
+ ++ H N+K+V+ K
Sbjct: 422 RAISGRFVQVNHAENNKRVEIK 443
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +3
Query: 135 RKLFVGGLSWETSDKELRDHFSAYGEI 215
RK+F+GGL + S++++ F A+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 464
K++VGGL S+ + E++ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 464
K++VGGL S+ + E++ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 464
K++VGGL S+ + E++ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF-DKTKNQRKGFCFI 515
+++VGG S+ +S ++I+N + EV + + + +GF F+
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFV 56
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 31.1 bits (67), Expect = 0.49
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 45 TTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI 224
T + + NS GG + N P +L G + WE K+++D F +YG I+
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 225 N--VKTDPNTGRSRGFAFIVFKAPDSI 299
DP R+R + + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 30.3 bits (65), Expect = 0.86
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
++F G L +E+SD+ + F + + + ++ + N+ KG+ F++
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVS 250
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 84 GGDGQDNSAEAPGRDDDRK 140
GGDGQ NSA+ DDDR+
Sbjct: 894 GGDGQTNSADVTVNDDDRE 912
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 318 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE-VEMPFDKTKNQ 494
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 495 RKGFCFIT 518
GFC T
Sbjct: 88 GFGFCHFT 95
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 318 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE-VEMPFDKTKNQ 494
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 495 RKGFCFIT 518
GFC T
Sbjct: 88 GFGFCHFT 95
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 381 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDK 482
++VG L S +++D I F+ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical
protein F25H9.1 protein.
Length = 359
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 429 NFFSNFGNIIEVEMPFDKTKNQRKGFCFIT 518
++F+N+ N+I+ E +D+ R FCFIT
Sbjct: 238 DYFTNYENLIKNESYYDEGIQCRGHFCFIT 267
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +3
Query: 378 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 470
++++G L + SD ++++FF +G + +V M
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM 33
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +3
Query: 138 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
++++G L SD+++ F YG++ + +K GF F+ F+ D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMK--------NGFGFVDFQDQRDADDAV-- 52
Query: 318 GEHTINSKKV 347
H +N K++
Sbjct: 53 --HDLNGKEL 60
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 379 LPCLAFAFLGSTFLLLIVCSPAAITLSIESGALKTMNANPRDLPV 245
L CL+ F G T L L+ +P + L I+SGA+K + LPV
Sbjct: 211 LLCLSALFSGLT-LGLMSLTPQELELVIKSGAIKEQKCAAKILPV 254
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 144 FVGGLSWETSDKELRDHFSAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPDSIDKVM 311
+VG L W T+D +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 222 INVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 380
++V+ N S+GF F+ + PD D+ A TI ++V+ A R H K
Sbjct: 9 VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 63
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 129 DDRKLFVGGLSWET-SDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 305
+ ++LFV + + KEL+ +F AYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 306 VM 311
++
Sbjct: 87 LL 88
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +3
Query: 42 ITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIES 221
++ DNQ +E +NS E + R +++ G S +T ++ + +GE E+
Sbjct: 81 VSEDNQKIRRNEEN--PVPENSLEYWQKIKHRTVYMKGFSTDTQLDDIIQWANQFGETEN 138
Query: 222 INV-KTDPNTGRSRGFAFIVFKAPDSIDKVMAA 317
+ + + P +G FI +K + + A
Sbjct: 139 VLMRRLKPGDRTFKGSVFITYKTREEAEAAQKA 171
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 255 SRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARH 374
SRGF IVF A ++++V G H +N K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,858,277
Number of Sequences: 27780
Number of extensions: 245435
Number of successful extensions: 1143
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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