Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_G05
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 193 8e-50
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 193 8e-50
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 135 2e-32
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 131 4e-31
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 124 3e-29
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 99 2e-21
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 91 6e-19
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 90 1e-18
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 76 2e-14
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 71 4e-13
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z81116-3|CAB03303.1| 346|Caenorhabditis elegans Hypothetical pr... 28 4.9
U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical ... 28 4.9
AF040643-11|AAQ65204.1| 266|Caenorhabditis elegans Hypothetical... 28 4.9
AF040643-10|AAB94962.2| 314|Caenorhabditis elegans Hypothetical... 28 4.9
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 6.5
U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell m... 27 6.5
AF040643-7|AAM98035.1| 314|Caenorhabditis elegans Hypothetical ... 27 6.5
AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein. 27 6.5
AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical... 27 8.6
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 27 8.6
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 27 8.6
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 193 bits (470), Expect = 8e-50
Identities = 89/153 (58%), Positives = 108/153 (70%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
N+G++ P IGLGTW+SKPGEV A+K AV GYRHIDCAH+Y N+KEVGEALK DEG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 257 VKREEIFITSKLWCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEFPKDA 436
VKREE+FITSK+W T+H + I L DL L Y+DL LIHWPQ + EG + FP
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 437 TDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
K+ S VDY++TWKA E+ + G RSIGLS
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLS 160
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 193 bits (470), Expect = 8e-50
Identities = 89/153 (58%), Positives = 108/153 (70%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
N+G++ P IGLGTW+SKPGEV A+K AV GYRHIDCAH+Y N+KEVGEALK DEG
Sbjct: 8 NSGYSIPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGK 67
Query: 257 VKREEIFITSKLWCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEFPKDA 436
VKREE+FITSK+W T+H + I L DL L Y+DL LIHWPQ + EG + FP
Sbjct: 68 VKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAEGAELFPAGE 127
Query: 437 TDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
K+ S VDY++TWKA E+ + G RSIGLS
Sbjct: 128 NGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLS 160
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 135 bits (327), Expect = 2e-32
Identities = 71/161 (44%), Positives = 98/161 (60%)
Frame = +2
Query: 53 SAGVPVIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEAL 232
SA + +NG PVIGLGTW+S P EV AVK AV GYR ID A +Y NE+ +G A+
Sbjct: 3 SATASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAI 62
Query: 233 KAKFDEGVVKREEIFITSKLWCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEG 412
K +EGVVKREE+FIT+K W P +E ++ +L+ L LEY+DLYL H P AF +
Sbjct: 63 KELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDD 122
Query: 413 DDEFPKDATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
E I S V+ D W+ +++ + GL +++G+S
Sbjct: 123 MSEH--------IASPVE--DVWRQFDAVYKAGLAKAVGVS 153
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 132 bits (319), Expect = 2e-31
Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKP-GEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEG 253
N G P+ GLGTW+ K E+T A++ A+D GYR ID AH+Y NE +G+ L G
Sbjct: 9 NTGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSG 68
Query: 254 VVKREEIFITSKLWCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEF-PK 430
+KRE+IF+TSKL T H P+ V +++ L+ L LEY+DLYLIH P FK + F P
Sbjct: 69 KLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKHQEGSFAPL 128
Query: 431 DATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
++ + + ++DTW+A+E L ++G +++G+S
Sbjct: 129 MENGELAVTEIAHIDTWRALEKLYKEGKLKALGVS 163
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 131 bits (316), Expect = 4e-31
Identities = 70/163 (42%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Frame = +2
Query: 50 MSAGVPVI-FNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGE 226
MS+ VP+ +NG P IGLGTW+ E +++AV GYRHID A +Y NE ++G+
Sbjct: 1 MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGD 60
Query: 227 ALKAKFDEGVVKREEIFITSKLWCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFK 406
AL F EG++KRE+IFIT+K +C PD+VE+A++ +L+ L L+Y+DLYL H P + K
Sbjct: 61 ALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAHIPASTK 120
Query: 407 EGDDEFPKDATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
+ D F D V D W+ E + GLT++IG+S
Sbjct: 121 D-DGSFRSD---------VKVEDIWRGFEKVYGLGLTKAIGVS 153
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 124 bits (300), Expect = 3e-29
Identities = 63/161 (39%), Positives = 92/161 (57%), Gaps = 5/161 (3%)
Frame = +2
Query: 68 VIFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFD 247
V N+G+ PVIG GTW+ + V+DA++ GYRHID A + N++EV +K
Sbjct: 7 VTLNSGYEMPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCK 66
Query: 248 EGVVKREEIFITSKLWCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDE-- 421
V+REE+F++SK+W TYH + I L+ Y+DL +IHWP + E +
Sbjct: 67 IRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFGWAEDEPPGE 126
Query: 422 ---FPKDATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
+P+ A K+ S VDY++TWKA+E G RSIGL+
Sbjct: 127 RGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLA 167
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 98.7 bits (235), Expect = 2e-21
Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
N G+ CP+IGLGT+K +V + A+ GYR D A +Y NEKE+G+AL+ +
Sbjct: 6 NTGYDCPLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHN 65
Query: 257 VKREEIFITSKLWCTYHRPDLVEDAIKTTLQDLGL---EYLDLYLIHWPQAFKEGDDEFP 427
+KRE+IFIT+K+ P+ VE+ K + L L Y+D+YLIH+P++F GD + P
Sbjct: 66 LKREDIFITTKM-----HPNTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDYGDQD-P 119
Query: 428 KDATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
+ T ++ TW + G RS+G+S
Sbjct: 120 MNKTLRIA--------TWNDLWECKNAGKIRSVGVS 147
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 90.6 bits (215), Expect = 6e-19
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 2/154 (1%)
Frame = +2
Query: 80 NGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVV 259
NG P + LGT+++K ++ AV +A+ +GYR D A Y NEK++G ALK +
Sbjct: 6 NGQEIPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNI 65
Query: 260 KREEIFITSKL--WCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEFPKD 433
E+I++TSK+ + + + +L+ + +L+ L +YLDL L+H+P+ P D
Sbjct: 66 CSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPR---------PLD 116
Query: 434 ATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
D + + DTW A+E L +G RSIG+S
Sbjct: 117 TEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVS 150
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 89.8 bits (213), Expect = 1e-18
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Frame = +2
Query: 95 PVIGLGTWKSKPGEVTQAVKDA-VDIGYRHIDCAHIYLNEKEVGEALKAKFDEGVVKREE 271
P+IG+GTW+ + E+ + V DA GYR ID A +Y NE ++G L+ +KRE+
Sbjct: 12 PLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRED 71
Query: 272 IFITSKLWCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEFPKDATDKVI 451
I+ITSKL + ++I+ +L +L +EYLDL LIHWP + + ++ A K+
Sbjct: 72 IWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLIHWPGSSLKSEN----PANKKL- 126
Query: 452 PSSVDYVDTWKAMESLVEKGLTRSIGLS 535
V++W M ++ +G RS+G+S
Sbjct: 127 -----RVESWNVMCEMMAEGKLRSVGVS 149
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 86.6 bits (205), Expect = 1e-17
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
N+G+ P +G GT+K V A+ A+ GYR D A YLNEKE+GEALK +
Sbjct: 16 NSGYNIPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHG 75
Query: 257 VKREEIFITSKLWC-TYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEFPKD 433
+ R ++F+TSK + + + + ++ +LQ L +Y+D+YL+H+P+ P D
Sbjct: 76 LSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPK---------PND 126
Query: 434 ATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
+ + + ++ ++ +E G RSIG+S
Sbjct: 127 SDNDDVNNAEYRKIAYEVLEEAKAAGKVRSIGVS 160
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 77.8 bits (183), Expect = 5e-15
Identities = 37/72 (51%), Positives = 49/72 (68%)
Frame = +2
Query: 77 NNGHTCPVIGLGTWKSKPGEVTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDEGV 256
+N H+ P +GLGTW+S +V AVK AV GY ID A Y NE+ +G A+K EGV
Sbjct: 51 SNAHSMPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGV 110
Query: 257 VKREEIFITSKL 292
VKRE++FIT+K+
Sbjct: 111 VKREDLFITTKV 122
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Frame = +2
Query: 74 FNNGHTCPVIGLGTWKSKPGE-VTQAVKDAVDIGYRHIDCAHIYLNEKEVGEALKAKFDE 250
F++G+ P IGLG + + + + +++ A+ GYR D A++Y NE +G +LK +
Sbjct: 14 FSDGYEMPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQ 73
Query: 251 GVVKREEIFITSKL-WCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEFP 427
+ RE++FIT+K+ + + E + +L L +Y+DL LIH+P+ G+D+
Sbjct: 74 FGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDD-- 131
Query: 428 KDATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
D I S + W+ +E E G RSIG+S
Sbjct: 132 ----DYEINKSRRKI-VWQTLEKAKESGRVRSIGVS 162
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 71.3 bits (167), Expect = 4e-13
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Frame = +2
Query: 71 IFNNGHTCPVIGLGTWKSKPGEVTQAVKDAVD-IGYRHIDCAHIYLNEKEVGEALKAKFD 247
+ +N P+IGLGT S G AV ++ GYR ID A Y EK++G A+K
Sbjct: 6 VLSNNVEMPLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVK---- 60
Query: 248 EGVVKREEIFITSKLWCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEFP 427
V REE+F+++KLW D V +A +T+ + L +YLD+Y+IH PQ
Sbjct: 61 NCSVPREEMFLSTKLW-PVDCGDEVYNAFQTSCEKLQTDYLDMYMIHMPQ---------- 109
Query: 428 KDATDKVIPSSVDYVDTWKAMESLVEKGLTRSIGLS 535
D ++ TW+ ME L E RSIG+S
Sbjct: 110 --LPDWIVNQKETKEKTWRQMELLYEDEHVRSIGVS 143
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 51.2 bits (117), Expect = 5e-07
Identities = 29/81 (35%), Positives = 47/81 (58%)
Frame = +2
Query: 293 WCTYHRPDLVEDAIKTTLQDLGLEYLDLYLIHWPQAFKEGDDEFPKDATDKVIPSSVDYV 472
W P +E A++ +L+ L LEY+DLYL H P AF + D + K I SSV+
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSD-------DMSQK-IESSVE-- 102
Query: 473 DTWKAMESLVEKGLTRSIGLS 535
D W+ +++ + GL +++G+S
Sbjct: 103 DIWRQFDAVYKAGLAKAVGVS 123
>Z81116-3|CAB03303.1| 346|Caenorhabditis elegans Hypothetical
protein T06C12.3 protein.
Length = 346
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 160 GILYSLSHFTRLRLPSAQSYNRTSMSVVENNWDAGRHF 47
G L+SLS F + P A +YNR + N+W + + F
Sbjct: 51 GFLFSLSEF--IARPFAHNYNRALILFSINDWISSKSF 86
>U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical
protein ZK1127.7 protein.
Length = 819
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 338 TTLQDLGLEYLDLYLIHWPQAFKEGDDEFPKDATDKVIPSSVDY 469
+ L D +E +L + W Q +KE E +++DK P VDY
Sbjct: 522 SVLDDNTIEITELPIKQWTQDYKEKVLEGLMESSDKKSPVIVDY 565
>AF045645-3|AAC02610.2| 193|Caenorhabditis elegans Hypothetical
protein K02D7.2 protein.
Length = 193
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +1
Query: 109 GHLEVEAG*SDSGCKGCRRYRLQAHRLCSHLP*REGSWRGIESEVR*RCCEKGRNFHYVQ 288
GHL G GC+ C R L +HL G E + RC G++F VQ
Sbjct: 113 GHLRTHTGEKPFGCEFCGRCFADRSNLRAHLQTHSG-------EKKHRCSRCGQSFARVQ 165
Query: 289 I 291
+
Sbjct: 166 V 166
>AF040643-11|AAQ65204.1| 266|Caenorhabditis elegans Hypothetical
protein F14D2.4b protein.
Length = 266
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 325 FNEIRPMVSAPQFGRNENFFPFHNTFIELRFQCLANFLLVKV-NVSTIDVPVTDIDGILY 149
+++I +V+ +F + F FH+TF E F L F K+ V D+ V D L
Sbjct: 156 YSDIVVLVNGQRFYLLKKFLAFHSTFFESLF--LGGFYEAKLAEVPLYDIDVDDFQKFLE 213
Query: 148 SLSHF 134
L F
Sbjct: 214 VLYGF 218
>AF040643-10|AAB94962.2| 314|Caenorhabditis elegans Hypothetical
protein F14D2.4a protein.
Length = 314
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 325 FNEIRPMVSAPQFGRNENFFPFHNTFIELRFQCLANFLLVKV-NVSTIDVPVTDIDGILY 149
+++I +V+ +F + F FH+TF E F L F K+ V D+ V D L
Sbjct: 156 YSDIVVLVNGQRFYLLKKFLAFHSTFFESLF--LGGFYEAKLAEVPLYDIDVDDFQKFLE 213
Query: 148 SLSHF 134
L F
Sbjct: 214 VLYGF 218
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 344 LQDLGLEYLDLYLIHWPQAFKEGDDEFPKDATDKVIPSSVDY 469
L D +E +L + W Q +KE E +++DK P VDY
Sbjct: 951 LDDNTIEITELPIKQWTQDYKEKVLEGLMESSDKKSPVIVDY 992
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 344 LQDLGLEYLDLYLIHWPQAFKEGDDEFPKDATDKVIPSSVDY 469
L D +E +L + W Q +KE E +++DK P VDY
Sbjct: 951 LDDNTIEITELPIKQWTQDYKEKVLEGLMESSDKKSPVIVDY 992
>U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell
migration protein 23 protein.
Length = 552
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 65 PVIFNNGHTCPVI--GLGTWKSKPGEVTQAVKDAVDIGYRHI 184
PVI++N I GL T+ +KP + + ++ +++ RHI
Sbjct: 75 PVIYDNKPVMKKISPGLSTFGTKPAQAAEYLRPLMELAERHI 116
>AF040643-7|AAM98035.1| 314|Caenorhabditis elegans Hypothetical
protein F14D2.12 protein.
Length = 314
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 325 FNEIRPMVSAPQFGRNENFFPFHNTFIELRFQCLANFLLVKVNVSTIDVPVTDID 161
+++I +V +F + F FH+TF E F L F K+ +VP+ DID
Sbjct: 156 YSDIVVLVDGQRFYLLKKFLAFHSTFFESLF--LGGFYEAKLT----EVPLYDID 204
>AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein.
Length = 552
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 65 PVIFNNGHTCPVI--GLGTWKSKPGEVTQAVKDAVDIGYRHI 184
PVI++N I GL T+ +KP + + ++ +++ RHI
Sbjct: 75 PVIYDNKPVMKKISPGLSTFGTKPAQAAEYLRPLMELAERHI 116
>AL132860-19|CAB60502.1| 159|Caenorhabditis elegans Hypothetical
protein Y56A3A.21 protein.
Length = 159
Score = 27.1 bits (57), Expect = 8.6
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -2
Query: 310 PMVSAPQFGRNENFFPFHNTFI-ELRFQCLAN----FLLVKVNVSTIDVPVTDIDGILYS 146
P SA F + FF + TFI E QC N +VN I V ++D + +
Sbjct: 22 PKYSASSFSTTDGFFHYKTTFITEFTLQCSNNPKNIQYTAEVNGRLIPVSISD-ETAKFQ 80
Query: 145 LSHFTRLRLPSAQSYN 98
+S + AQ++N
Sbjct: 81 VSWTLEHKDAGAQTFN 96
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 83 GHTCPVIGLGTWKSKPGEVTQAVKD 157
GHT P++GL TW + +D
Sbjct: 505 GHTAPILGLYTWSQAGNQFVSCSQD 529
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 83 GHTCPVIGLGTWKSKPGEVTQAVKD 157
GHT P++GL TW + +D
Sbjct: 771 GHTAPILGLYTWSQAGNQFVSCSQD 795
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 83 GHTCPVIGLGTWKSKPGEVTQAVKD 157
GHT P++GL TW + +D
Sbjct: 771 GHTAPILGLYTWSQAGNQFVSCSQD 795
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,452,192
Number of Sequences: 27780
Number of extensions: 302554
Number of successful extensions: 776
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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