Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F24
(310 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 204 7e-54
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 204 7e-54
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 204 1e-53
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 204 1e-53
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 204 1e-53
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 204 1e-53
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 204 1e-53
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 204 1e-53
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 204 1e-53
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 204 1e-53
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 194 1e-50
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 140 1e-34
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 130 3e-31
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 4e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 67 2e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 47 2e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.002
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.002
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 34 0.018
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 30 0.38
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 1.5
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 2.0
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 26 4.7
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 26 4.7
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 26 4.7
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 26 6.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 26 6.2
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 26 6.2
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 26 6.2
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 26 6.2
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 204 bits (499), Expect = 7e-54
Identities = 97/100 (97%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 204 bits (499), Expect = 7e-54
Identities = 97/100 (97%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 204 bits (498), Expect = 1e-53
Identities = 96/100 (96%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 204 bits (498), Expect = 1e-53
Identities = 96/100 (96%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 204 bits (498), Expect = 1e-53
Identities = 96/100 (96%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 204 bits (498), Expect = 1e-53
Identities = 96/100 (96%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 204 bits (498), Expect = 1e-53
Identities = 96/100 (96%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 204 bits (498), Expect = 1e-53
Identities = 96/100 (96%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 81 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 140
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 141 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 180
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 204 bits (498), Expect = 1e-53
Identities = 96/100 (96%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 111 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 170
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 171 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 210
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 204 bits (498), Expect = 1e-53
Identities = 96/100 (96%), Positives = 100/100 (100%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGR
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDYLMKILTERGYSFTTTAER+IVRDI+EKLCYVALDF
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 224
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 194 bits (472), Expect = 1e-50
Identities = 91/100 (91%), Positives = 97/100 (97%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGR
Sbjct: 124 FETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGR 183
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALDF 309
DLTDY+MKILTERGY+FTTTAER+IVRDI+EKLCYVA DF
Sbjct: 184 DLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDF 223
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 140 bits (340), Expect = 1e-34
Identities = 62/99 (62%), Positives = 81/99 (81%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGR
Sbjct: 128 FETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGR 187
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALD 306
D+T+YL +L GY F + E +IVR+++E CY+ALD
Sbjct: 188 DVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD 226
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 130 bits (313), Expect = 3e-31
Identities = 56/99 (56%), Positives = 78/99 (78%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGR
Sbjct: 128 FEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGR 187
Query: 190 DLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALD 306
D+T YL+K+L +RGY+F +A+ + VR ++EKLCY+A D
Sbjct: 188 DITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYD 226
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.1 bits (221), Expect = 4e-20
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 8/107 (7%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAI 165
FE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I
Sbjct: 138 FESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCI 197
Query: 166 LRLDLAGRDLTDYLMKILTERGYSFTTTAERDIVRDIQEKLCYVALD 306
+ +AGRD+T ++ +L +R ++ ++ + I+EK CYV D
Sbjct: 198 KHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPD 244
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/73 (38%), Positives = 49/73 (67%)
Frame = +1
Query: 10 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 189
FE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G
Sbjct: 147 FEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGD 206
Query: 190 DLTDYLMKILTER 228
+T+ L ++L ++
Sbjct: 207 LITEQLAQMLDQQ 219
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 47.2 bits (107), Expect = 2e-06
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +1
Query: 49 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 228
Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAH 368
Query: 229 G---YSFTTTAERDIVRDIQEKLCYVALDF 309
Y+F + E+ I+R E+ YV D+
Sbjct: 369 NKGLYAFQSPVEKLILRFALEQTTYVPEDY 398
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +1
Query: 91 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERDIVR 270
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 271 DIQEKLCYVALDF 309
+ +E LC+V+ +F
Sbjct: 204 ECKEDLCFVSQNF 216
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +1
Query: 91 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERDIVR 270
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 271 DIQEKLCYVALDF 309
+ +E LC+V+ +F
Sbjct: 204 ECKEDLCFVSQNF 216
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 34.3 bits (75), Expect = 0.018
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 116 TPSPESSTIPVVRPDAYSESTAWIATYMAGVLKVSNP 6
TP P SST+PVV P ++ T +Y+A L P
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTLATPGP 901
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 29.9 bits (64), Expect = 0.38
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 68 TRPVVPPVS-CWIPAMVYPTQYPSTRVTPYRTPSCV 172
TRP P++ W P +VY Q+P R+ P +P C+
Sbjct: 43 TRPRKSPLNENWKPDVVYLYQFPRARLLPNLSPFCM 78
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +2
Query: 29 PPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PV 187
PPC P C P PP +P P P+ P P C+ P+
Sbjct: 27 PPCP---EPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPM 76
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 2.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 81 YHRYRAGFRRWCIP 122
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 175 PDAGWRAVGRNPRRWVLCGIHHRRNPARYRWYDRT 71
PD + RNP+ + HH RN Y W + T
Sbjct: 160 PDTKYIYCVRNPKDCLTSYFHHNRNFKIYNWANGT 194
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -2
Query: 300 RNVAEFLLDVANDVTLGGGGERVTTLCE---NLHQVV 199
R++ FL+DV +D ++G +R+ CE LH VV
Sbjct: 96 RSLDAFLMDVTSDESVGEVAKRLEKKCEQYGGLHAVV 132
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -2
Query: 300 RNVAEFLLDVANDVTLGGGGERVTTLCE---NLHQVV 199
R++ FL+DV +D ++G +R+ CE LH VV
Sbjct: 121 RSLDAFLMDVTSDESVGEVAKRLEKKCEQYGGLHAVV 157
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 113 PSPESSTIPVVRPDAYSESTAW 48
P P P+V P +YSES W
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEW 1740
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 113 PSPESSTIPVVRPDAYSESTAW 48
P P P+V P +YSES W
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEW 1740
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 113 PSPESSTIPVVRPDAYSESTAW 48
P P P+V P +YSES W
Sbjct: 540 PPPAKIHAPMVSPGSYSESEEW 561
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 113 PSPESSTIPVVRPDAYSESTAW 48
P P P+V P +YSES W
Sbjct: 540 PPPAKIHAPMVSPGSYSESEEW 561
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 113 PSPESSTIPVVRPDAYSESTAW 48
P P P+V P +YSES W
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEW 1740
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 113 PSPESSTIPVVRPDAYSESTAW 48
P P P+V P +YSES W
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEW 1740
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 25.8 bits (54), Expect = 6.2
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 17 PSTHPPCT*-LSRPCSHCTRPVVPP----VSCWIP-AMVYPTQYPS--TRVTPYRTPSCV 172
P+ P C+ +S CS C+ PVV P VS + P + Y PS + P P+CV
Sbjct: 6 PAIMPCCSLSISYSCSSCSAPVVAPAPVAVSGYQPYGIAYYPVVPSCTAQCMPTCAPTCV 65
Query: 173 WT 178
T
Sbjct: 66 DT 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,315,867
Number of Sequences: 27780
Number of extensions: 143859
Number of successful extensions: 529
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -