Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F22
         (430 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.28 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   2.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   2.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   3.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    22   8.0  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 27.1 bits (57), Expect = 0.28
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 2    HDDAWVFIYVGRSEKKLAFSIH*RSDNVIHLDYSYMPV 115
            HD A VFIY+ R ++++ F +  R   + H   S+  +
Sbjct: 1604 HDRAHVFIYLIREDQRVKFILRQRPSEIRHNIQSFREI 1641


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 218 RGHFSRIQ-DLPVAWAVHNDRPASEVHPH*PVLFIVLACMSN 96
           R    R+Q DL  AW +       ++ P  P L +V AC+S+
Sbjct: 169 RREAERLQFDLQGAWRISQANAEFKLCPSYPRLLLVPACISD 210


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 218 RGHFSRIQ-DLPVAWAVHNDRPASEVHPH*PVLFIVLACMSN 96
           R    R+Q DL  AW +       ++ P  P L +V AC+S+
Sbjct: 169 RREAERLQFDLQGAWRISQANAEFKLCPSYPRLLLVPACISD 210


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 125 GRVNEDVPPRPAGHYVRPKRPG 190
           G   E  P  PAGH   P RPG
Sbjct: 158 GPKGEPGPKGPAGHPGAPGRPG 179


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 125 GRVNEDVPPRPAGHYVRP 178
           G   +  PPRP G Y +P
Sbjct: 204 GTPTQPQPPRPGGMYPQP 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,735
Number of Sequences: 2352
Number of extensions: 11354
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)