Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F22
(430 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030411-1|ABO52831.1| 1076|Drosophila melanogaster IP09257p pro... 102 2e-22
BT001524-1|AAN71279.1| 819|Drosophila melanogaster RE01752p pro... 102 2e-22
AE014296-2439|AAF49697.2| 819|Drosophila melanogaster CG13466-P... 102 2e-22
AY118904-1|AAM50764.1| 743|Drosophila melanogaster LD16387p pro... 33 0.16
AE014297-3302|AAF56118.1| 743|Drosophila melanogaster CG4448-PA... 33 0.16
AE014134-2558|AAZ66469.1| 173|Drosophila melanogaster CG33679-P... 31 0.65
BT015954-1|AAV36839.1| 462|Drosophila melanogaster SD11903p pro... 29 2.6
AE014134-2122|AAF53141.1| 462|Drosophila melanogaster CG5202-PA... 29 2.6
U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription ... 28 4.6
AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p pro... 28 4.6
AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA... 28 4.6
>BT030411-1|ABO52831.1| 1076|Drosophila melanogaster IP09257p
protein.
Length = 1076
Score = 102 bits (244), Expect = 2e-22
Identities = 40/68 (58%), Positives = 56/68 (82%)
Frame = +3
Query: 219 PPQNKLKLEWVYGYRVKDCRSNLYLLPTGEIVYFVAAVVVLFNVEEQCQRHYTGHTDDVQ 398
PP KL+L+WV+GYR D R NL++LP+GE++Y+VAAV VLF+ +E QRHYTGHT+D+
Sbjct: 472 PPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYTGHTEDIM 531
Query: 399 CLAVHPNK 422
C+ VHP++
Sbjct: 532 CMDVHPSR 539
>BT001524-1|AAN71279.1| 819|Drosophila melanogaster RE01752p
protein.
Length = 819
Score = 102 bits (244), Expect = 2e-22
Identities = 40/68 (58%), Positives = 56/68 (82%)
Frame = +3
Query: 219 PPQNKLKLEWVYGYRVKDCRSNLYLLPTGEIVYFVAAVVVLFNVEEQCQRHYTGHTDDVQ 398
PP KL+L+WV+GYR D R NL++LP+GE++Y+VAAV VLF+ +E QRHYTGHT+D+
Sbjct: 215 PPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYTGHTEDIM 274
Query: 399 CLAVHPNK 422
C+ VHP++
Sbjct: 275 CMDVHPSR 282
>AE014296-2439|AAF49697.2| 819|Drosophila melanogaster CG13466-PA
protein.
Length = 819
Score = 102 bits (244), Expect = 2e-22
Identities = 40/68 (58%), Positives = 56/68 (82%)
Frame = +3
Query: 219 PPQNKLKLEWVYGYRVKDCRSNLYLLPTGEIVYFVAAVVVLFNVEEQCQRHYTGHTDDVQ 398
PP KL+L+WV+GYR D R NL++LP+GE++Y+VAAV VLF+ +E QRHYTGHT+D+
Sbjct: 215 PPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYTGHTEDIM 274
Query: 399 CLAVHPNK 422
C+ VHP++
Sbjct: 275 CMDVHPSR 282
>AY118904-1|AAM50764.1| 743|Drosophila melanogaster LD16387p
protein.
Length = 743
Score = 33.1 bits (72), Expect = 0.16
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 372 YTGHTDDVQCLAVHPN 419
Y GHT DV+C+A HPN
Sbjct: 577 YAGHTQDVECVAFHPN 592
>AE014297-3302|AAF56118.1| 743|Drosophila melanogaster CG4448-PA
protein.
Length = 743
Score = 33.1 bits (72), Expect = 0.16
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 372 YTGHTDDVQCLAVHPN 419
Y GHT DV+C+A HPN
Sbjct: 577 YAGHTQDVECVAFHPN 592
>AE014134-2558|AAZ66469.1| 173|Drosophila melanogaster CG33679-PA
protein.
Length = 173
Score = 31.1 bits (67), Expect = 0.65
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 54 LFQYINAATMSFTSITHTCQYNEE 125
+F Y A M F++I HTC YN++
Sbjct: 101 VFYYFYTAFMPFSNINHTCPYNDD 124
>BT015954-1|AAV36839.1| 462|Drosophila melanogaster SD11903p
protein.
Length = 462
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 330 VVVLFN-VEEQCQRHYTGHTDDVQCLAVHPNK 422
V+ +FN V+ QC ++Y GH + L HP +
Sbjct: 192 VIRIFNPVKHQCSKNYIGHGHAINELKFHPTR 223
>AE014134-2122|AAF53141.1| 462|Drosophila melanogaster CG5202-PA,
isoform A protein.
Length = 462
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 330 VVVLFN-VEEQCQRHYTGHTDDVQCLAVHPNK 422
V+ +FN V+ QC ++Y GH + L HP +
Sbjct: 192 VIRIFNPVKHQCSKNYIGHGHAINELKFHPTR 223
>U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription
initiation factorTFIID 85 kDa subunit protein.
Length = 704
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 357 QCQRHYTGHTDDVQCLAVHPN 419
Q R + GH DV C+ HPN
Sbjct: 525 QALRVFVGHLSDVDCVQFHPN 545
>AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p
protein.
Length = 704
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 357 QCQRHYTGHTDDVQCLAVHPN 419
Q R + GH DV C+ HPN
Sbjct: 525 QALRVFVGHLSDVDCVQFHPN 545
>AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA
protein.
Length = 704
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 357 QCQRHYTGHTDDVQCLAVHPN 419
Q R + GH DV C+ HPN
Sbjct: 525 QALRVFVGHLSDVDCVQFHPN 545
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,057,970
Number of Sequences: 53049
Number of extensions: 502481
Number of successful extensions: 1475
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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