Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F18
(345 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6P2Q9 Cluster: Pre-mRNA-processing-splicing factor 8; ... 235 2e-61
UniRef50_A6R4K4 Cluster: Pre-mRNA processing splicing factor 8; ... 186 7e-47
UniRef50_Q8I1X5 Cluster: Pre-mRNA splicing factor, putative; n=1... 186 9e-47
UniRef50_A4IBT3 Cluster: PRP8 protein homologue, putative; n=8; ... 137 4e-32
UniRef50_Q9AW36 Cluster: Splicing factor Prp8; n=1; Guillardia t... 119 2e-26
UniRef50_Q7QTZ9 Cluster: GLP_169_4270_455; n=1; Giardia lamblia ... 64 8e-10
UniRef50_UPI000065D685 Cluster: G patch domain-containing protei... 33 1.3
UniRef50_Q2SFU5 Cluster: Predicted acetyltransferase; n=1; Hahel... 33 1.3
UniRef50_Q0RV52 Cluster: Possible fatty acid-CoA racemase; n=1; ... 33 1.7
UniRef50_Q8YKV0 Cluster: All7191 protein; n=4; Nostocaceae|Rep: ... 32 3.0
UniRef50_Q2GRX7 Cluster: Predicted protein; n=1; Chaetomium glob... 32 3.0
UniRef50_P94974 Cluster: Putative lysyl-tRNA synthetase 2; n=22;... 31 5.3
UniRef50_Q7A3A5 Cluster: SA2397 protein; n=16; Staphylococcus|Re... 31 6.9
UniRef50_Q1JXD7 Cluster: Putative uncharacterized protein; n=2; ... 31 6.9
UniRef50_Q12E33 Cluster: Twin-arginine translocation pathway sig... 31 6.9
UniRef50_A7BXR5 Cluster: RelA/SpoT family protein; n=1; Beggiato... 31 6.9
UniRef50_A6EDS4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_A5ZH07 Cluster: Putative uncharacterized protein; n=2; ... 31 6.9
UniRef50_A0L4H8 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_Q2J9T8 Cluster: Monooxygenase, FAD-binding; n=4; Actino... 30 9.2
UniRef50_A4JTW0 Cluster: Putative uncharacterized protein; n=2; ... 30 9.2
>UniRef50_Q6P2Q9 Cluster: Pre-mRNA-processing-splicing factor 8;
n=106; Eukaryota|Rep: Pre-mRNA-processing-splicing factor
8 - Homo sapiens (Human)
Length = 2335
Score = 235 bits (574), Expect = 2e-61
Identities = 105/113 (92%), Positives = 110/113 (97%)
Frame = +1
Query: 7 EDTMDNTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLA 186
+D MD+TTTQKYW+DIQLRWGDYDSHD+ERYARAKFLDYTTDNMSIYPSPTG+LIAIDLA
Sbjct: 1649 KDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLA 1708
Query: 187 YNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEP 345
YNLHSAYGNWFPG KPLIQQAMAKIMKANPALYVLRERIRK LQLYSSEPTEP
Sbjct: 1709 YNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEP 1761
>UniRef50_A6R4K4 Cluster: Pre-mRNA processing splicing factor 8; n=1;
Ajellomyces capsulatus NAm1|Rep: Pre-mRNA processing
splicing factor 8 - Ajellomyces capsulatus NAm1
Length = 2739
Score = 186 bits (454), Expect = 7e-47
Identities = 83/112 (74%), Positives = 98/112 (87%)
Frame = +1
Query: 7 EDTMDNTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLA 186
+D ++ TTT K+WLD+QLR+GDYDSHD+ERY RAK+LDYTTD+MSIYPS TGL+I IDLA
Sbjct: 2052 KDVIEPTTTNKFWLDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPSATGLMIGIDLA 2111
Query: 187 YNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTE 342
Y +SAYG +FPG K L+QQAMAKIMKANPALYVLRERIRK LQLY+SE +
Sbjct: 2112 YKPYSAYGQYFPGLKALVQQAMAKIMKANPALYVLRERIRKGLQLYASESNQ 2163
>UniRef50_Q8I1X5 Cluster: Pre-mRNA splicing factor, putative; n=1;
Plasmodium falciparum 3D7|Rep: Pre-mRNA splicing factor,
putative - Plasmodium falciparum (isolate 3D7)
Length = 3136
Score = 186 bits (453), Expect = 9e-47
Identities = 79/106 (74%), Positives = 97/106 (91%)
Frame = +1
Query: 28 TTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAY 207
T+ ++W+DIQLRWGD+DSHD+ERY+RAKFLDYTTDN+SIYP TG+LI +DLAYNL+SAY
Sbjct: 2353 TSNQFWIDIQLRWGDFDSHDIERYSRAKFLDYTTDNLSIYPCLTGVLIGVDLAYNLYSAY 2412
Query: 208 GNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEP 345
GNWF KPL+Q+A+ KI+++NP+LYVLRERIRK LQLYSSEPTEP
Sbjct: 2413 GNWFNNLKPLMQKALQKIVQSNPSLYVLRERIRKGLQLYSSEPTEP 2458
>UniRef50_A4IBT3 Cluster: PRP8 protein homologue, putative; n=8;
Trypanosomatidae|Rep: PRP8 protein homologue, putative -
Leishmania infantum
Length = 2427
Score = 137 bits (332), Expect = 4e-32
Identities = 59/111 (53%), Positives = 80/111 (72%)
Frame = +1
Query: 10 DTMDNTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAY 189
D ++TT K+W+D+QLRWG+YDSH++ YAR KF +Y+T M YP P G+++AIDLAY
Sbjct: 1726 DVYQHSTTSKFWIDVQLRWGNYDSHNIAEYARKKFYEYSTARM--YPFPAGIVVAIDLAY 1783
Query: 190 NLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTE 342
N HSA+G W PG KP + + M IMK N L LR+R+++ L L+SS PTE
Sbjct: 1784 NCHSAFGYWIPGMKPFMSKLMPVIMKNNITLNTLRDRMKRDLGLFSSAPTE 1834
>UniRef50_Q9AW36 Cluster: Splicing factor Prp8; n=1; Guillardia
theta|Rep: Splicing factor Prp8 - Guillardia theta
(Cryptomonas phi)
Length = 2057
Score = 119 bits (286), Expect = 2e-26
Identities = 50/104 (48%), Positives = 68/104 (65%)
Frame = +1
Query: 31 TQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYG 210
+Q YW+D+QLRWGD+DSHD+ERY R K+ +Y +YPS G+LIA DL YN++S+YG
Sbjct: 1477 SQVYWIDVQLRWGDFDSHDIERYVRMKYYEYNDVKKKLYPSGHGILIAYDLCYNVYSSYG 1536
Query: 211 NWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTE 342
NW G I+ + K + L +LR RIRK+LQ+Y E
Sbjct: 1537 NWILGLSNFIKNELFSFHKNSAILNILRSRIRKSLQIYQKNNIE 1580
>UniRef50_Q7QTZ9 Cluster: GLP_169_4270_455; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_169_4270_455 - Giardia lamblia ATCC
50803
Length = 1271
Score = 63.7 bits (148), Expect = 8e-10
Identities = 36/108 (33%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Frame = +1
Query: 22 NTTTQKYWLDIQLRWGDYDS-HDVERYARAKFLDYTTD-NMSIYPSPTGLLIAIDLAYNL 195
++ T +W+D+ L WG+ D+ + +Y++ + YT+D + IY SP G++I IDL Y
Sbjct: 526 DSCTHLWWIDLHLTWGNVDTCTSLAKYSKDRHKYYTSDRSRGIYRSPHGIIICIDLLYRE 585
Query: 196 HSAYGNWFPGCKPLIQQAMAKIMK---ANPALYVLRERIRKALQLYSS 330
+AYG+ P I +A++++++ +N + +L +RIR L L SS
Sbjct: 586 IAAYGSVPTIAIPAINKAISELLESLHSNTMMNMLADRIRTQLGLSSS 633
>UniRef50_UPI000065D685 Cluster: G patch domain-containing protein
3.; n=1; Takifugu rubripes|Rep: G patch
domain-containing protein 3. - Takifugu rubripes
Length = 509
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = +3
Query: 162 FAYRHRPRL*SAQRLWELVPGMQTSHTTSDGEDNEGQPGAVRTQRAYT*GTTVVLVRTDR 341
F YRHRP + ELV G Q S D E+ +G P + +R VV VR
Sbjct: 40 FHYRHRPEIIREHDRPELVSGDQGSSPPPDTENEQGTPVSSAKKRTTKSRCCVVAVRAKD 99
Query: 342 A 344
A
Sbjct: 100 A 100
>UniRef50_Q2SFU5 Cluster: Predicted acetyltransferase; n=1; Hahella
chejuensis KCTC 2396|Rep: Predicted acetyltransferase -
Hahella chejuensis (strain KCTC 2396)
Length = 150
Score = 33.1 bits (72), Expect = 1.3
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +3
Query: 195 AQRLWELVPGMQTSHTTSDGEDNEGQPGAVRTQRAYT*GTTVVLVRTDR 341
A+ ELV + S T G+DN G+PG+ T Y G V VR DR
Sbjct: 53 AEEQGELVGHIAISPVTIQGDDNSGRPGSASTPNWY--GLGPVSVRPDR 99
>UniRef50_Q0RV52 Cluster: Possible fatty acid-CoA racemase; n=1;
Rhodococcus sp. RHA1|Rep: Possible fatty acid-CoA
racemase - Rhodococcus sp. (strain RHA1)
Length = 381
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 82 HDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYG 210
HD+ AR+ FLD TD P P G IA D+A LH+A G
Sbjct: 147 HDINYLARSGFLDQATDAAG-SPVPIGPPIA-DVAAGLHAAVG 187
>UniRef50_Q8YKV0 Cluster: All7191 protein; n=4; Nostocaceae|Rep:
All7191 protein - Anabaena sp. (strain PCC 7120)
Length = 1596
Score = 31.9 bits (69), Expect = 3.0
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +1
Query: 10 DTMDNTTTQKYWLDIQLRWGDYDSH----DVERYARAKFLDYTTDNMSIYPSPTGLLIAI 177
+ +DNT + Y+ D Q +G D H D++ + L ++ +Y SP L I
Sbjct: 31 EKLDNTLLEFYFPDKQFSFGHIDEHSTPEDLKNHPDGHILLLSSKTRLLYGSPECLEIID 90
Query: 178 DLAYNL--HSAYGNWF-PGCKPLIQQAM 252
L + AYG+ F GCK I Q +
Sbjct: 91 KLCPDRKDRGAYGSIFLGGCKNSIHQQL 118
>UniRef50_Q2GRX7 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 105
Score = 31.9 bits (69), Expect = 3.0
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 13 TMDNTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNM 138
T+DNT +YW+D Q + + D +RYA + L+ +N+
Sbjct: 50 TVDNTDRVEYWVDSQTMITERANRDKQRYAEDEELEARLNNL 91
>UniRef50_P94974 Cluster: Putative lysyl-tRNA synthetase 2; n=22;
cellular organisms|Rep: Putative lysyl-tRNA synthetase 2
- Mycobacterium tuberculosis
Length = 1172
Score = 31.1 bits (67), Expect = 5.3
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 184 AYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRK 309
AY H+ Y W GC+ LIQ A AN A +R R K
Sbjct: 938 AYQAHADYLEWIDGCRELIQNA---AQAANGAPIAMRPRTDK 976
>UniRef50_Q7A3A5 Cluster: SA2397 protein; n=16; Staphylococcus|Rep:
SA2397 protein - Staphylococcus aureus (strain N315)
Length = 457
Score = 30.7 bits (66), Expect = 6.9
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 129 RQHVDISIAYGFAYR-HRPRL*SAQRLWELVPGMQTSHTTSDGEDNEGQPGAVRTQRAYT 305
+ VD I Y AY H P + A++L EL PG T ++ G ++ RAYT
Sbjct: 80 KAQVDKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLTGSDANDGIIKFARAYT 139
>UniRef50_Q1JXD7 Cluster: Putative uncharacterized protein; n=2;
Desulfuromonas acetoxidans DSM 684|Rep: Putative
uncharacterized protein - Desulfuromonas acetoxidans DSM
684
Length = 85
Score = 30.7 bits (66), Expect = 6.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 37 KYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNM 138
KY ++ R DY SH VERY ++ +DY D +
Sbjct: 19 KYIKELNGRIFDYASHCVERYTFSELVDYAKDGI 52
>UniRef50_Q12E33 Cluster: Twin-arginine translocation pathway signal
precursor; n=7; Proteobacteria|Rep: Twin-arginine
translocation pathway signal precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 442
Score = 30.7 bits (66), Expect = 6.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 124 TTDNMSIYPSPTGLLIAIDLAYNLHSAYGNWFPGCKPLIQ 243
T D+ ++YP LL DLA L Y W+P C+ ++
Sbjct: 109 TNDDANLYPEK--LLDVTDLATYLGKKYEGWYPACEAYLR 146
>UniRef50_A7BXR5 Cluster: RelA/SpoT family protein; n=1; Beggiatoa
sp. PS|Rep: RelA/SpoT family protein - Beggiatoa sp. PS
Length = 740
Score = 30.7 bits (66), Expect = 6.9
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Frame = +1
Query: 4 QEDTM-DNTTTQKY-WLDIQLRWGDY--DSHD-VERYARAKFLDYT---TDNMSIYPSPT 159
+EDT D + QK WL L+W D D++D ++R+ F D + + P
Sbjct: 365 EEDTQHDKSFEQKIAWLRRMLQWKDEENDANDFLDRFKSEIFEDRVYILSPKGEVIDLPQ 424
Query: 160 GLLIAIDLAYNLHSAYGNWFPGCKPLIQQA-MAKIMKANPALYVLRERIRK 309
G A+D AY++H+ G+ G K + + I+K+ + VL+ + K
Sbjct: 425 GAT-ALDFAYHIHTQVGHCCRGAKVNNRLVPLTYILKSGDLIEVLQAKEEK 474
>UniRef50_A6EDS4 Cluster: Putative uncharacterized protein; n=1;
Pedobacter sp. BAL39|Rep: Putative uncharacterized
protein - Pedobacter sp. BAL39
Length = 299
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 88 VERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAYGNWFPGCK 231
V +AR + + D SI PS G IA + +N + AY W+ K
Sbjct: 29 VTYFARTFLIAHHLDIPSIIPSVLGTAIAFFIGFNNNQAYDRWWEARK 76
>UniRef50_A5ZH07 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides caccae ATCC 43185
Length = 851
Score = 30.7 bits (66), Expect = 6.9
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 43 WLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHSAY--GNW 216
W+D L G+Y H + +FLD ++ I G +D + A+ G
Sbjct: 588 WMDENLFNGEYYEHKITDPKTFEFLDMNDPDVKIPGFQLGQGCLVDQLVGQYMAHLCGLG 647
Query: 217 FPGCKPLIQQAMAKIMKAN 273
+ G K IQ M IMK N
Sbjct: 648 YLGDKKNIQTTMKSIMKYN 666
>UniRef50_A0L4H8 Cluster: Putative uncharacterized protein; n=1;
Magnetococcus sp. MC-1|Rep: Putative uncharacterized
protein - Magnetococcus sp. (strain MC-1)
Length = 127
Score = 30.7 bits (66), Expect = 6.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 34 QKYWLDIQLRWGDYDSHDVER 96
QK W+D++ RWG Y D++R
Sbjct: 92 QKVWVDLKRRWGFYRVQDIDR 112
>UniRef50_Q2J9T8 Cluster: Monooxygenase, FAD-binding; n=4;
Actinomycetales|Rep: Monooxygenase, FAD-binding -
Frankia sp. (strain CcI3)
Length = 404
Score = 30.3 bits (65), Expect = 9.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 178 LWR*ANP*AMDISTCCRSCSRGTWRG 101
+W A P ++ +STC CS+ TW+G
Sbjct: 185 IWFHAYPSSVGVSTCIVECSQRTWKG 210
>UniRef50_A4JTW0 Cluster: Putative uncharacterized protein; n=2;
Burkholderiales|Rep: Putative uncharacterized protein -
Burkholderia vietnamiensis (strain G4 / LMG 22486)
(Burkholderiacepacia (strain R1808))
Length = 224
Score = 30.3 bits (65), Expect = 9.2
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -1
Query: 177 YGDKQTRRRWIYRH-VVGRVVEELGAGVTLHVMRIVIAPT*LYIQPVFLRRCVVHSV 10
YGDK+T R W+ + V+GR+ +G TL V ++IA + P L C+V +
Sbjct: 105 YGDKETGRDWLSEYDVIGRIGRSMG---TLKV-PLMIANSSSSGGPAILDACIVRII 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,542,461
Number of Sequences: 1657284
Number of extensions: 6559268
Number of successful extensions: 16899
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 16646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16895
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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