Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F17
         (542 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130432-1|AAI30433.1|  612|Homo sapiens otopetrin 1 protein.          53   6e-07
BC130430-1|AAI30431.1|  612|Homo sapiens otopetrin 1 protein.          53   6e-07
L38019-1|AAB04947.2| 2710|Homo sapiens inositol 1,4,5-trisphosph...    32   1.5  
D26350-1|BAA05384.1| 2701|Homo sapiens type 2 inositol 1,4,5-tri...    32   1.5  
D26070-1|BAA05065.1| 2695|Homo sapiens human type 1 inositol 1,4...    32   1.5  
AF013178-1|AAC02790.1|  289|Homo sapiens beta-spectrin protein.        31   3.4  
AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta, erythro...    31   3.4  

>BC130432-1|AAI30433.1|  612|Homo sapiens otopetrin 1 protein.
          Length = 612

 Score = 53.2 bits (122), Expect = 6e-07
 Identities = 21/71 (29%), Positives = 38/71 (53%)
 Frame = +2

Query: 221 RSKPARQAVTFLLICNVTMWLIYTFEAQKVLANPVQLDFYGFVAWSLVQRFTLPLCIFHR 400
           + K  R    FL +CN+++W+   F  +    N ++   +GF  W +V    +P  IF+R
Sbjct: 539 KRKVLRNIAAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPWIIVVNLAMPFSIFYR 598

Query: 401 FHSAVTLAEIW 433
            H+A +L E++
Sbjct: 599 MHAAASLFEVY 609


>BC130430-1|AAI30431.1|  612|Homo sapiens otopetrin 1 protein.
          Length = 612

 Score = 53.2 bits (122), Expect = 6e-07
 Identities = 21/71 (29%), Positives = 38/71 (53%)
 Frame = +2

Query: 221 RSKPARQAVTFLLICNVTMWLIYTFEAQKVLANPVQLDFYGFVAWSLVQRFTLPLCIFHR 400
           + K  R    FL +CN+++W+   F  +    N ++   +GF  W +V    +P  IF+R
Sbjct: 539 KRKVLRNIAAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEPWIIVVNLAMPFSIFYR 598

Query: 401 FHSAVTLAEIW 433
            H+A +L E++
Sbjct: 599 MHAAASLFEVY 609


>L38019-1|AAB04947.2| 2710|Homo sapiens inositol 1,4,5-trisphosphate
           receptor type 1 protein.
          Length = 2710

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 135 DVLAYFRWSCSYSLLLMCLDVEFISQNRNEASRRVKLLLSCLS 263
           DVL+Y+R+  +     MCLD ++++ N       V L+L C+S
Sbjct: 729 DVLSYYRYQLNL-FARMCLDRQYLAINEISGQLDVDLILRCMS 770


>D26350-1|BAA05384.1| 2701|Homo sapiens type 2 inositol
           1,4,5-trisphosphate receptor protein.
          Length = 2701

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 132 LDVLAYFRWSCSYSLLLMCLDVEFISQNRNEASRRVKLLLSCLS 263
           L+VL Y+R+  +     MCLD ++++ N+      V L+L C+S
Sbjct: 724 LEVLTYYRYQLNL-FARMCLDRQYLAINQISTQLSVDLILRCVS 766


>D26070-1|BAA05065.1| 2695|Homo sapiens human type 1 inositol
           1,4,5-trisphosphate receptor protein.
          Length = 2695

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 135 DVLAYFRWSCSYSLLLMCLDVEFISQNRNEASRRVKLLLSCLS 263
           DVL+Y+R+  +     MCLD ++++ N       V L+L C+S
Sbjct: 714 DVLSYYRYQLNL-FARMCLDRQYLAINEISGQLDVDLILRCMS 755


>AF013178-1|AAC02790.1|  289|Homo sapiens beta-spectrin protein.
          Length = 289

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = -2

Query: 346 EPIEIQLNRVSKNFLCFESV-NQPHGDIADKQESNSLTRRLASFLFWEMNSTSRHISNKE 170
           +P  IQ +R+S    CFE + N   G  A  ++S    +RL  F FWEM+     I  KE
Sbjct: 5   DPQVIQ-DRISHLEQCFEELSNMAAGRKAQLEQS----KRLWKF-FWEMDEAESWIKEKE 58

Query: 169 *LQDHLKYAK 140
            +   L Y K
Sbjct: 59  QIYSSLDYGK 68


>AB209415-1|BAD92652.1| 2332|Homo sapiens spectrin, beta,
           erythrocytic (includes spherocytosis, clinical type I)
           variant protein.
          Length = 2332

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = -2

Query: 346 EPIEIQLNRVSKNFLCFESV-NQPHGDIADKQESNSLTRRLASFLFWEMNSTSRHISNKE 170
           +P  IQ +R+S    CFE + N   G  A  ++S    +RL  F FWEM+     I  KE
Sbjct: 608 DPQVIQ-DRISHLEQCFEELSNMAAGRKAQLEQS----KRLWKF-FWEMDEAESWIKEKE 661

Query: 169 *LQDHLKYAK 140
            +   L Y K
Sbjct: 662 QIYSSLDYGK 671


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,976,169
Number of Sequences: 237096
Number of extensions: 1741059
Number of successful extensions: 7393
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7393
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)