Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F16
(458 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 34 0.012
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 32 0.048
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 0.60
SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|ch... 27 1.0
SPCC191.08 |||DUF1715 family protein|Schizosaccharomyces pombe|c... 27 1.4
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 27 1.8
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 27 1.8
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 26 2.4
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 26 2.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 2.4
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 26 3.2
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 26 3.2
SPBC18E5.03c |sim4||kinetochore protein Sim4 |Schizosaccharomyce... 26 3.2
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 26 3.2
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 4.2
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 4.2
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 4.2
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 25 5.6
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 25 7.3
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 25 7.3
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 24 9.7
SPBC19G7.14c |cog5||Golgi transport complex subunit Cog5 |Schizo... 24 9.7
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 24 9.7
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 33.9 bits (74), Expect = 0.012
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 157 LNLSDPAIQT-YLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESL 333
LN+S+ AI +LKQ++ E L K RN EI L +I+P V I + + Y++ +
Sbjct: 410 LNISEDAISVVFLKQMLQEKSFLALKQMRN--EIG-LKDIEPKVLIDCLKTSFYENFRAA 466
Query: 334 KELNKREGK 360
+NK GK
Sbjct: 467 SNMNKNRGK 475
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 31.9 bits (69), Expect = 0.048
Identities = 22/93 (23%), Positives = 46/93 (49%)
Frame = +1
Query: 127 VLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERI 306
++ P C +H+ + P+I + QL E+E ++LR +++ R + +K + L E
Sbjct: 440 IISPSCSSHAFVKAIPSISSKFSQLAEEYE---SQLREKEEDLIRANRLKQ--DTLNEIS 494
Query: 307 ALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 405
Y + L++ N + M+++I+ E Y
Sbjct: 495 RTYQELTFLQKNNPTYSQ--SMENLIREAQETY 525
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.3 bits (60), Expect = 0.60
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Frame = +1
Query: 139 KCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRR---NADEIRRLHEIKPIVNILEERIA 309
K ++ + A+ +K+ I+ EKL+ L+ N +E +L E K +L+ +
Sbjct: 609 KSLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAE-KYHEELLDNQQK 667
Query: 310 LYD-SIE------SLKELNK-----REGKDSEMKDMIKHEAEIYLKRINEVDGE 435
LYD IE + K++ + REG +SE+KD I+ +++ K+++++ +
Sbjct: 668 LYDLRIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKL-TKQLDDIKNQ 720
Score = 25.0 bits (52), Expect = 5.6
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +1
Query: 238 RNADEIRRLHEIKPIVNIL----EERIALYDSIESLKE-LNKREGKDSEMKDMIKHEAEI 402
+N D + L + K + N L + L + + L E LNK+ K+ I+ EAE+
Sbjct: 727 KNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTIR-EAEL 785
Query: 403 YLKRINEVDGELQSIL 450
K +N+ G ++I+
Sbjct: 786 SKKALNDNLGNKENII 801
>SPAPB2B4.03 |cig2|cyc17|cyclin Cig2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 1.0
Identities = 11/43 (25%), Positives = 27/43 (62%)
Frame = +1
Query: 280 IVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYL 408
++N+L ++ + L+++++ EG D++ + + K+ EIYL
Sbjct: 256 MLNVLNFDLSYPSPLNFLRKISQAEGYDAQTRTLGKYLTEIYL 298
>SPCC191.08 |||DUF1715 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 134
Score = 27.1 bits (57), Expect = 1.4
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 187 YLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDS 321
+LK+ +H K+ K R+ ++++ L E P N LEE A +DS
Sbjct: 58 WLKEENSQHPKIK-KAHRHLEQLKSLLESLPTNNELEETDAGFDS 101
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 295 EERIALYDSIESLKELNKREGKDSEMKDMIKHE 393
E+R AL ++E KELNK +DS+++ K++
Sbjct: 27 EKRRALRKALEGNKELNKDLQEDSQLQKDYKYD 59
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 1.8
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 265 HEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQS 444
++++ +VN+ RI D+ + K + +EAE K++ E+D LQ
Sbjct: 4 NDLQKVVNLFNTRIVQLDNYVTRLSTEKSPNTEITQALSSSYEAEEKAKQLKELDFRLQQ 63
Query: 445 I 447
+
Sbjct: 64 L 64
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 26.2 bits (55), Expect = 2.4
Identities = 16/86 (18%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 148 THSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALY-DSI 324
+++ +L A+Q ++L + ++LH + + R E++ ++ L + + Y +++
Sbjct: 506 SNNYDLQGAAVQYLQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTV 565
Query: 325 ESLK-ELNKREGKDSEMKDMIKHEAE 399
LK +L K + K+ ++ + + E
Sbjct: 566 RELKLDLEKSKKKNEDLSKLEVEKVE 591
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 26.2 bits (55), Expect = 2.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 134 INTVYLLVYNKERYTINLENDIS 66
+N + L NKE +TINL N +S
Sbjct: 594 LNRLITLTPNKETFTINLANSLS 616
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 2.4
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 15/68 (22%)
Frame = +1
Query: 286 NILEERIALYDS----IESLKELNKREGKDSE---------MKDMI--KHEAEIYLKRIN 420
N L+E+ AL D + +L+E K + K SE +D++ K + E+Y ++N
Sbjct: 476 NELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQRDILNEKKKHEVYESQLN 535
Query: 421 EVDGELQS 444
E+ GELQ+
Sbjct: 536 ELKGELQT 543
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 25.8 bits (54), Expect = 3.2
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 217 KLHAKLRRNADEIRRLHEIKP--IVNILEERIALYDSIESLKE-LNKREGKDSEMKDMIK 387
KL L + +R +EI IV++ EE+ LYD+++ + E +N G ++ + +
Sbjct: 852 KLKQTLNDASQGVRSNYEIFSHLIVDLFEEKQTLYDALDGVFETVNIDMGSETAQRSLCI 911
Query: 388 HEAEIYLK 411
E I L+
Sbjct: 912 TELPIILQ 919
>SPBC13E7.06 |msd1|mug172|spindle pole body protein
Msd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 3.2
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Frame = +1
Query: 193 KQLMIEHEKLHAKLRRNADEIRRLHEIKP---IVNIL--------EERIALYDSIESLKE 339
+ L+ ++ L +K A+++R H+I+ IVNI+ EER+ ++++K
Sbjct: 15 ESLLYINKSLFSKGVIQAEKLRLSHDIRDNCNIVNIIYRLLRATDEERLEKESLLDAIKN 74
Query: 340 LNKREGKDSEMKDMIKHEAEIY 405
+ +D+ +K+E E+Y
Sbjct: 75 NEYEKQRDNNTIKRLKNELELY 96
>SPBC18E5.03c |sim4||kinetochore protein Sim4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 277
Score = 25.8 bits (54), Expect = 3.2
Identities = 23/98 (23%), Positives = 37/98 (37%)
Frame = +1
Query: 133 IPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIAL 312
+ KC + AI + L + LH+ + A LH+IK + L+ +
Sbjct: 79 LKKCIAFKPIIGKNAIDNNISDLK---KNLHSNKKLEAVLKEELHQIKKFSSDLQSLKSS 135
Query: 313 YDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEV 426
+ + R GK S + I E E Y K E+
Sbjct: 136 MGERQKQQAAMSRRGKKSIIHSAIIQEKERYEKESQEL 173
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.8 bits (54), Expect = 3.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 301 RIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQ 441
R+A Y I +L + +K +GKDS+++ + H+ L I G LQ
Sbjct: 644 RVA-YSRISNLHKSSKEKGKDSQVR-VALHKENTALNNIVLPSGNLQ 688
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.4 bits (53), Expect = 4.2
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 157 LNLSDPAIQTYLKQLM--IEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIES 330
L++ + ++ +KQ+ IE EK++A+ R E+ +L + EERI S
Sbjct: 212 LSVHNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAAQ------EERIEKLSSNNR 265
Query: 331 LKELNKREGKDSEMK 375
E+ K E D E K
Sbjct: 266 NVEILKEEKNDLESK 280
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.4 bits (53), Expect = 4.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 127 VLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADE 252
+LIPK L+ A+Q+Y L I +EK +K+ D+
Sbjct: 768 ILIPKVARRGLSQLPWALQSYPSPLNIHYEKFVSKVTIENDK 809
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.4 bits (53), Expect = 4.2
Identities = 9/44 (20%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 325 ESLKELNKREGKDSEMKDMI---KHEAEIYLKRINEVDGELQSI 447
+S+ + K + + ++++ + HEAEI +K++N+ + ++ +
Sbjct: 257 KSISDATKHKNEIFQLEEKLHEASHEAEISIKKLNDAENRIKEL 300
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 25.0 bits (52), Expect = 5.6
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = -1
Query: 320 LSYNAILSSRMLTIGFISCKRRISSAFLRNFACSFSCSIINCL 192
+ Y +I + R+ + + CK+ ++ L+ +F S+ NCL
Sbjct: 107 VGYGSIENCRVKALAYEKCKKEGTTDALKRALRNFGSSMGNCL 149
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 24.6 bits (51), Expect = 7.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 292 LEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEI 402
+E R+ YD IES + N K + +KD+ + + +I
Sbjct: 39 IERRVKKYDQIESEYKTNIENEKKAFIKDVSQVQQKI 75
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 24.6 bits (51), Expect = 7.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +1
Query: 139 KCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERI 306
KC + + + +++L I +KL R+N ++ R+ + N+L RI
Sbjct: 111 KCLRMQIVAQEEYVAPLIQKLEIIEKKLDKSFRKNMEDELRITRLASENNVLISRI 166
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 24.2 bits (50), Expect = 9.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 269 SCKRRISSAFLRNFACSFSCSIINC 195
S K + L + CS SC + NC
Sbjct: 229 SAKNALDWGILSIYVCSASCDLANC 253
>SPBC19G7.14c |cog5||Golgi transport complex subunit Cog5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 411
Score = 24.2 bits (50), Expect = 9.7
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 178 IQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALY 315
I+ L+QLM+ +E++ + + ++ + LHE IVN+ + LY
Sbjct: 84 IEGKLEQLMLVYERIRSLVVIPSENLGPLHE--AIVNLHSTYMTLY 127
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 24.2 bits (50), Expect = 9.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 190 LKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEER 303
L++ + + E+L A + EIR L + K ++ I EER
Sbjct: 255 LRREIRDEEQLFAGEKLTQAEIRELEKKKELLRIAEER 292
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,664,767
Number of Sequences: 5004
Number of extensions: 31873
Number of successful extensions: 121
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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