Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F16
(458 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 34 0.063
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 31 0.45
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 29 1.4
01_07_0053 + 40772966-40773080,40773484-40773578,40773730-407738... 29 1.4
05_01_0488 - 4070506-4072277,4072455-4072557 29 2.4
03_05_1007 - 29637911-29638333,29640095-29640282,29640688-296407... 29 2.4
11_04_0119 - 13645068-13645436 28 3.1
02_01_0164 + 1146093-1146119,1146682-1146955,1147309-1147684,114... 28 3.1
05_03_0270 - 11337212-11337418,11337448-11337606,11337696-113377... 28 4.2
03_05_0484 + 24808817-24809620,24810263-24810567,24811363-24812389 28 4.2
12_02_0312 + 17395716-17398112 27 7.3
01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33... 27 7.3
05_05_0208 + 23275931-23275996,23276084-23276196,23276279-232764... 27 9.6
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552... 27 9.6
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 33.9 bits (74), Expect = 0.063
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 148 THSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRR-LHEIKPIVNILEERIALYDSI 324
T +L L++ K+ E ++++ +L R +E + + +++ V LEERIA DS+
Sbjct: 1389 TDALYLTERQEHDQTKKAFSEAQEINQQLYRKIEEAEKNIEQLRENVERLEERIAYIDSL 1448
Query: 325 ESLKELNKREGKDSEMKDMIKHEAEI 402
+++ E K E+ D K E+
Sbjct: 1449 LAIERRENNETK-KELADAQKEIEEL 1473
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 31.1 bits (67), Expect = 0.45
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 202 MIEHEKLHAKLRRN-ADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKD 378
++E E + +L ++ D R+++ ++ VN LEERIA D SL E+ ++E ++ KD
Sbjct: 1310 LVEAESRNRELTKSFEDSDRKINLLEDSVNRLEERIAEKD---SLLEIERQE--NNATKD 1364
Query: 379 MIKHEAEIYLKRINEVDGELQSI 447
+ + ++ +NE +LQ I
Sbjct: 1365 EVTNAQNKIMELVNE-SQQLQDI 1386
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +1
Query: 235 RRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKR 414
+R DE+ HE+K ++ E+++ L + ++S KE +R +SEM +K ++ +
Sbjct: 1482 KRQRDEL--YHELK---DVKEQKLCL-ERLDSSKETKRRRKAESEMLSALKKVHDLEHQY 1535
Query: 415 INEV 426
+NE+
Sbjct: 1536 LNEL 1539
>01_07_0053 +
40772966-40773080,40773484-40773578,40773730-40773843,
40773984-40774088,40774179-40774250,40774293-40774346,
40774507-40774619,40774705-40774839,40774941-40775009,
40775140-40775227,40775327-40775398,40775476-40775576,
40775836-40775953,40776054-40776113,40776206-40776316,
40776499-40776573,40776821-40776854,40777453-40777805,
40778154-40778222,40778526-40778762
Length = 729
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +1
Query: 70 MSFSR-LIVYRSLLYTNKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNA 246
+SF + + Y++L+ + Y + L+L D IQ +K+++I + L +
Sbjct: 377 LSFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEIIISYYILMENGKATI 436
Query: 247 DEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEV 426
+++ E +++E L + E + + K E +D I + LKR NE+
Sbjct: 437 EDLDLQCE-----ELIQEEFGLQCNFEVMDAVQKLERLGIITRDSIGRICCLSLKRANEI 491
Query: 427 DG 432
G
Sbjct: 492 IG 493
>05_01_0488 - 4070506-4072277,4072455-4072557
Length = 624
Score = 28.7 bits (61), Expect = 2.4
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +1
Query: 85 LIVYRSLLYTNKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRR- 261
L++ L NK T L+ T + + L QL +EH KL A+ AD R+
Sbjct: 506 LLLSEKSLVDNKVTTLLTDITTRDEKMKQ--MDDQLNQLQLEHSKLMAQ----ADLARKS 559
Query: 262 LHEIKPIVNILEERIALYDSIESLKELNKRE 354
L E+ V LE+ + + + S KRE
Sbjct: 560 LSELHARVCELEKEVEMQKLVISESAEGKRE 590
>03_05_1007 -
29637911-29638333,29640095-29640282,29640688-29640773,
29641108-29641173,29641289-29641331,29641398-29642328
Length = 578
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 316 DSIESLKELNKREGKDSEMKDMIKHEA---EIYLKRINEVDGELQSI 447
D E+ E++ EG+ E ++ +KHEA E+ K +++ + EL+++
Sbjct: 211 DDDEARHEVDDDEGRHDEWEERLKHEADGGEVMHKELDDHELELETV 257
>11_04_0119 - 13645068-13645436
Length = 122
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 112 TNKYTVLIP-KCYTHSLNLSDPAIQTYLKQLMI 207
T+ Y+V+ P +C T +N+SD AIQ + L+I
Sbjct: 50 TSNYSVVTPTRCSTVVINISDIAIQVLVAPLII 82
>02_01_0164 +
1146093-1146119,1146682-1146955,1147309-1147684,
1149021-1149239,1149572-1149710,1149844-1150092,
1150556-1150855
Length = 527
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 142 CYTHSLNLSDPAIQTYLKQLMIE-HEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYD 318
C+T ++ + D A L M LH AD + R H + PI ++ + L+D
Sbjct: 292 CFTQAIRMWDLAAADSLPSCMRSCFRALHTVTNDIADMVEREHGVNPINHLKKAWAMLFD 351
Query: 319 S-IESLKELNKREGKDSE 369
+ K L+ + DSE
Sbjct: 352 GFMTETKWLSAGQVPDSE 369
>05_03_0270 -
11337212-11337418,11337448-11337606,11337696-11337770,
11337926-11338004,11338096-11338144,11338243-11338426,
11338511-11338609,11338742-11338840
Length = 316
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +1
Query: 256 RRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHE 393
+ LH+++ ++++EE + + IE LK L ++ + ++M E
Sbjct: 46 KELHKLESTMDMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQE 91
>03_05_0484 + 24808817-24809620,24810263-24810567,24811363-24812389
Length = 711
Score = 27.9 bits (59), Expect = 4.2
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 178 IQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREG 357
IQTYL+ + + E++ K RR++++ H + P L ER+ YD + K +N R G
Sbjct: 406 IQTYLQSMTVRLEEMRVK-RRDSEQWMH-HRLLP--QELRERVRRYD---AYKWVNTR-G 457
Query: 358 KDSEM 372
D E+
Sbjct: 458 VDEEV 462
>12_02_0312 + 17395716-17398112
Length = 798
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +1
Query: 178 IQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERI------ALYDSIESLKE 339
I+TY QL I +L K+RR + + + +K ++ EE I + S+ +
Sbjct: 99 IRTYFAQLFIFPFELGRKIRRVRERLNEISALKRNFDLKEEPIDTPSDRIVQRETYSIVD 158
Query: 340 LNKREGKDSEMKDMIK 387
K G+D D++K
Sbjct: 159 ERKIVGRDKAKNDIVK 174
>01_01_0047 +
334809-334877,334966-335074,335159-335299,336337-336498,
336577-336734,337180-337310,337385-337472,337587-337690,
338346-338444,339060-339116,339262-339337,339519-339602,
339969-340010,340128-340198,341516-341564,342370-342441,
343149-343286,343393-343473,344166-344353,344591-345188,
345274-345342,346729-346854,347048-347175,347986-348142,
348342-348388,348472-348535,348691-348765,349292-349414,
349797-349982,351179-351303,351390-351459,351974-352101,
352585-352726,353065-353163,353239-353285,353598-353652,
353758-353967,354686-354757,354836-354905,355231-355414,
355521-355644,355732-355863,356252-356317,356805-356852,
357572-357676,357728-357865,358097-358399,358482-358594,
359082-359148,359236-359310,359395-359517,359610-359618,
360156-360320,360401-360502,361545-361696,361794-361995,
362079-362126,362215-362298,362613-362657,363302-363385,
363890-363970,364044-364133,364217-364279,364824-364841,
365238-365378,365494-365550,366091-366185,366275-366383,
367067-367156,367308-367387,367480-367558,367742-367903,
368005-368136,368335-368469,368553-368618,369317-369457,
369575-369648,369685-369910
Length = 2905
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 284 TIGFISCKRRISSAFLRN--FACSFSCSIINC 195
T GF+S ++ L N +ACS C++I+C
Sbjct: 604 TKGFMSSNKQFEKVDLPNLVYACSLVCNLIHC 635
>05_05_0208 +
23275931-23275996,23276084-23276196,23276279-23276459,
23276590-23276674,23276974-23277104,23277194-23277432,
23277512-23277748,23277838-23277992,23278039-23278271,
23278359-23278521,23278613-23278818,23278960-23279019,
23279106-23279198,23279406-23279569,23280070-23280138,
23280241-23280382,23280490-23280546
Length = 797
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +1
Query: 196 QLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMK 375
+ +I HAK++ + ++ +++ + +L A+Y + L E+ +RE ++ EMK
Sbjct: 637 ETIIRLSTAHAKMKLRHEVLKT--DVEAALQVLN--FAIYH--KELTEMEEREQREMEMK 690
Query: 376 DMIKHEA 396
H+A
Sbjct: 691 QQADHDA 697
>01_05_0801 + 25353708-25353914,25354307-25354429,25355035-25355205,
25355303-25355392,25355497-25355583,25355664-25355719,
25355812-25355905,25356032-25356144,25356211-25356283,
25356603-25356683,25356865-25356951,25357031-25357135,
25357279-25357385,25357481-25357541,25357931-25358158,
25359720-25360677,25360816-25360997,25361237-25361326,
25361422-25361709,25361844-25362056,25362560-25362784
Length = 1212
Score = 26.6 bits (56), Expect = 9.6
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +1
Query: 184 TYLKQLMIEHEKLHAKLRRNADEIRRLHE--IKPIVNILEERIALYDSIESLKELNKREG 357
++LK +E E+ + + E +R E +K I+ LE+++ +E ++ + +G
Sbjct: 947 SHLKLATLEQERADENVLKLVREHKREKEAAVKKILK-LEQQVDAKQKLEL--DIQQLKG 1003
Query: 358 KDSEMKDMIKHEAEIYLKRINEVDGELQ 441
K MK M E +I+E+ ELQ
Sbjct: 1004 KLEVMKHMPGDEDSALKNKIDELSEELQ 1031
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,110,913
Number of Sequences: 37544
Number of extensions: 156069
Number of successful extensions: 427
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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