Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F16
(458 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 33 0.13
Z75550-12|CAA99920.2| 356|Caenorhabditis elegans Hypothetical p... 30 0.70
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 0.70
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 29 1.2
AL117200-8|CAB55060.1| 183|Caenorhabditis elegans Hypothetical ... 29 2.1
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 2.8
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 28 2.8
Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 27 5.0
L14429-4|AAA28217.2| 171|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 27 6.6
Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 6.6
AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical ... 27 6.6
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 27 6.6
AC006679-7|AAK84463.1| 531|Caenorhabditis elegans Lipid deplete... 27 6.6
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 27 8.7
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 27 8.7
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 27 8.7
AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical ... 27 8.7
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 27 8.7
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 32.7 bits (71), Expect = 0.13
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Frame = +1
Query: 190 LKQLMIEHEKLHAKLRRNADEIRRLHEI--KPIVNILEERIALYDS---IESLKELNKRE 354
L ++ +++E+ K+ ++DEI L ++ K V + EE + +E+LK +E
Sbjct: 192 LTEINVDNER---KISNSSDEIFSLQDLLGKTKVQLEEETEKVLQERTIVENLKAQFLKE 248
Query: 355 GKDSEMK-DMIKHEAEIYLKRINE 423
K+S K ++I+ EAE Y KRI E
Sbjct: 249 RKESTEKIELIQKEAEDYRKRIEE 272
>Z75550-12|CAA99920.2| 356|Caenorhabditis elegans Hypothetical
protein T22C1.1 protein.
Length = 356
Score = 30.3 bits (65), Expect = 0.70
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 199 LMIEHEKLHAKLRRNADEIRRLHEIKPIVNIL--EERIALYDSIESLKELNKREGKDSEM 372
L IEH AKL + AD +R ++E+ +L E+ IA +DS K + +D EM
Sbjct: 235 LCIEH--FRAKLCKCADCVR-VYEMADCEFLLDDEDDIATFDSESRKKVEENKTTEDDEM 291
Query: 373 KDMIK 387
++M+K
Sbjct: 292 REMVK 296
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 229 KLRRNADEIRRLHEIKPIVN-ILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 405
K+R +++RR + + +L+E +YD S +LN +G + + + E++
Sbjct: 2392 KIREKINDLRRRKQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKI 2451
Query: 406 LKRINEV 426
++IN++
Sbjct: 2452 REKINDL 2458
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 229 KLRRNADEIRRLHEIKPIVN-ILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 405
K+R +++RR + + +L+E +YD S +LN +G + + + E++
Sbjct: 2450 KIREKINDLRRRKQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKI 2509
Query: 406 LKRINEV 426
++IN++
Sbjct: 2510 REKINDL 2516
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 175 AIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKRE 354
A++T ++ L E EKL L + + E+K VN R L D + +K +
Sbjct: 152 AVETLVEALRAEKEKLEKILEDARKKDDEIEELKKKVNSESSRATLADEAVQKLQTDKDK 211
Query: 355 GKDSEMKDM 381
++ M DM
Sbjct: 212 LEEEYMNDM 220
>AL117200-8|CAB55060.1| 183|Caenorhabditis elegans Hypothetical
protein Y50E8A.12 protein.
Length = 183
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 169 DPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIK 276
DP T+L + + H K K ADE RR HEIK
Sbjct: 147 DPNSMTFLMKTIFLHVK---KTMEEADEARRKHEIK 179
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 28.3 bits (60), Expect = 2.8
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Frame = +1
Query: 97 RSLLYTNKYTVLIPK---CYTHSLN------LSDPAIQTYLKQLMIEHEKLHAKLRRNAD 249
RSLL T T+L C T++L + DP +Q ++Q M ++L+ N D
Sbjct: 357 RSLLITRMLTLLKSASFTCVTNTLGAIANLIVKDPHMQQMIRQDMAAVQQLNVLRNSNRD 416
Query: 250 EIRRLHEIKPIVNILEE 300
+IR +K ++N L +
Sbjct: 417 DIRT--AVKSVLNTLNQ 431
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 28.3 bits (60), Expect = 2.8
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Frame = +1
Query: 97 RSLLYTNKYTVLIPK---CYTHSLN------LSDPAIQTYLKQLMIEHEKLHAKLRRNAD 249
RSLL T T+L C T++L + DP +Q ++Q M ++L+ N D
Sbjct: 357 RSLLITRMLTLLKSASFTCVTNTLGAIANLIVKDPHMQQMIRQDMAAVQQLNVLRNSNRD 416
Query: 250 EIRRLHEIKPIVNILEE 300
+IR +K ++N L +
Sbjct: 417 DIRT--AVKSVLNTLNQ 431
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 2.8
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Frame = +1
Query: 97 RSLLYTNKYTVLIPK---CYTHSLN------LSDPAIQTYLKQLMIEHEKLHAKLRRNAD 249
RSLL T T+L C T++L + DP +Q ++Q M ++L+ N D
Sbjct: 357 RSLLITRMLTLLKSASFTCVTNTLGAIANLIVKDPHMQQMIRQDMAAVQQLNVLRNSNRD 416
Query: 250 EIRRLHEIKPIVNILEE 300
+IR +K ++N L +
Sbjct: 417 DIRT--AVKSVLNTLNQ 431
>Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical
protein F14F8.12 protein.
Length = 329
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3
Query: 423 FINTF*VYLSLVLYHILHLAVFTFSFVQFL 334
FI TF + L ++L++ILH+ TF + FL
Sbjct: 71 FIATF-ILLFIILFYILHILQQTFHVILFL 99
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 27.5 bits (58), Expect = 5.0
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 208 EHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIK 387
EHEK + E +R HEI+ +E + E L+++ ++E K E+ K
Sbjct: 170 EHEKRIKEQDNQFIENQRQHEIEENERKMEFERKQAEHEEKLQQIREKERKLQELLLRQK 229
Query: 388 HEAEIYLKRINEVDGELQSIL 450
EAE R D E++ L
Sbjct: 230 EEAEEEALRRLANDSEIEQKL 250
>L14429-4|AAA28217.2| 171|Caenorhabditis elegans Hypothetical
protein ZK652.8 protein.
Length = 171
Score = 27.5 bits (58), Expect = 5.0
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 106 LYTNKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIV 285
+Y + I KC S N + +K+ + HEKL A+L + ++++ I+
Sbjct: 5 IYKHVSFFCISKCMDKSRNFQPNEGEEEMKKSWVRHEKLCAQLEACSLDLKQNEAQMTIL 64
Query: 286 NIL-EERIALYDSIESLKELNKREGKDSEMKDMIK 387
E + I L + K G+ E++++ K
Sbjct: 65 TATGGELKEKHKKIRGLLDEAKANGQQKELEELSK 99
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 112 YIIKNGIQLILKMTFPFNTDKIMIIVFLYFI 20
YI+ G +I+ + F N+ + I+VFL+ I
Sbjct: 76 YILHFGFYVIVIICFALNSSTLFILVFLFLI 106
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 232 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMI 384
LRR E + E+K ++ILE+RIA DS SL+E + +++E++D +
Sbjct: 910 LRRQDSEKMLVLELKKQISILEKRIA--DSNSSLEEC---KIQNAELRDQL 955
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 232 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMI 384
LRR E + E+K ++ILE+RIA DS SL+E + +++E++D +
Sbjct: 910 LRRQDSEKMLVLELKKQISILEKRIA--DSNSSLEEC---KIQNAELRDQL 955
>Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical
protein F54F7.1 protein.
Length = 254
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 331 LKELNKRE-GKDSEMKDMIKHEAEIYLKRINEVDGELQSI 447
+K KR K E K M E EI LKR+ D E QS+
Sbjct: 171 MKNAKKRRFRKKKEKKTMAVEEIEIELKRLLRSDLEAQSV 210
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 232 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMI 384
LRR E + E+K ++ILE+RIA DS SL+E + +++E++D +
Sbjct: 910 LRRQDSEKMLVLELKKQISILEKRIA--DSNSSLEEC---KIQNAELRDQL 955
>AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical
protein F59B1.8 protein.
Length = 420
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 214 EKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHE 393
E + + R+ E + E++PI+ L AL S ES + L+ E + + DM+ +
Sbjct: 161 EFVEGSVVRHCYENVTVDELQPILKALARLQALSLSTESCRNLDNGEAFEESLMDMLSED 220
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +1
Query: 295 EERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRIN 420
E+ + Y+ E +E + EGK++ + +++E + Y+K +N
Sbjct: 918 EDEESEYEDEEEDEEEEEEEGKENNEEKKVQNEIKHYIKLVN 959
>AC006679-7|AAK84463.1| 531|Caenorhabditis elegans Lipid depleted
protein 7 protein.
Length = 531
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 169 DPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVN---ILEERIALYDS 321
+P I + + + H K ++ D++++L+E KP+ + I++ER + S
Sbjct: 76 EPIINKFRDYKVFLRKLNHLKAKKEEDKLKKLYENKPVYSLDTIVKERFPTFGS 129
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/93 (19%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 181 QTYLKQLMIEHEKLHAKLRRNADEIRRLH-EIKPIVNILEERIALYDSIE-SLKELNKRE 354
Q ++++ + + +A++ DE++RLH ++ + + E A +E L++LN +
Sbjct: 305 QIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLNYQL 364
Query: 355 GKDSEMKDMIKHEAEIYLKRINEVDGELQSILI 453
D + ++ + ++++ E E Q++L+
Sbjct: 365 EDDQRSYEAALNDKDAQVRKLRE---ECQALLV 394
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/93 (19%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 181 QTYLKQLMIEHEKLHAKLRRNADEIRRLH-EIKPIVNILEERIALYDSIE-SLKELNKRE 354
Q ++++ + + +A++ DE++RLH ++ + + E A +E L++LN +
Sbjct: 305 QIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLNYQL 364
Query: 355 GKDSEMKDMIKHEAEIYLKRINEVDGELQSILI 453
D + ++ + ++++ E E Q++L+
Sbjct: 365 EDDQRSYEAALNDKDAQVRKLRE---ECQALLV 394
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/93 (19%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +1
Query: 181 QTYLKQLMIEHEKLHAKLRRNADEIRRLH-EIKPIVNILEERIALYDSIE-SLKELNKRE 354
Q ++++ + + +A++ DE++RLH ++ + + E A +E L++LN +
Sbjct: 305 QIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLNYQL 364
Query: 355 GKDSEMKDMIKHEAEIYLKRINEVDGELQSILI 453
D + ++ + ++++ E E Q++L+
Sbjct: 365 EDDQRSYEAALNDKDAQVRKLRE---ECQALLV 394
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 304 IALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSI 447
I+L D + +LKE+NK K E +D H ++ +NE + EL+ +
Sbjct: 194 ISLQDQLSTLKEVNK--AKVEECEDYRVHNNDL-RDLLNEKEAELRKL 238
>AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical
protein Y45F10A.2 protein.
Length = 502
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 214 EKLHAKLRRNADEIRRLHEIKPIVNILEERIALY 315
EK+H ++ RNA + R K I+ L+ ++LY
Sbjct: 470 EKIHGRVMRNAHRLERFSSGKKIIEALQS-MSLY 502
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 304 IALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSI 447
I+L D + +LKE+NK K E +D H ++ +NE + EL+ +
Sbjct: 194 ISLQDQLSTLKEVNK--AKVEECEDYRVHNNDL-RDLLNEKEAELRKL 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,872,693
Number of Sequences: 27780
Number of extensions: 168728
Number of successful extensions: 617
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -