Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0005_F14
         (589 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011492-1|AAR99150.1|  138|Drosophila melanogaster GM13193p pro...    91   8e-19
AE014297-4723|AAN14268.1|  138|Drosophila melanogaster CG1746-PC...    91   8e-19
AE014297-4722|AAF57131.1|  138|Drosophila melanogaster CG1746-PB...    91   8e-19
AE014297-4721|AAN14267.1|  138|Drosophila melanogaster CG1746-PA...    91   8e-19
BT001710-1|AAN71465.1|  106|Drosophila melanogaster RE67675p pro...    30   2.0  
AE013599-1945|AAM68548.1|  106|Drosophila melanogaster CG30476-P...    30   2.0  

>BT011492-1|AAR99150.1|  138|Drosophila melanogaster GM13193p
           protein.
          Length = 138

 Score = 91.5 bits (217), Expect = 8e-19
 Identities = 55/112 (49%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
 Frame = +1

Query: 79  SPCSRTAIFSNTALGATPLA-AVPTHTQIVPV---AP-AQLSAVRTFQTTSVTKDIDSAA 243
           +P +R+A  +N+     PL+ A+ + +Q +      P A L  +R+FQT+ VT+DIDSAA
Sbjct: 10  APVARSAFLANSKQYLRPLSSAIISQSQTLAAQNTTPVALLPQIRSFQTSPVTRDIDSAA 69

Query: 244 KFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 399
           KF                    FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 70  KFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 121


>AE014297-4723|AAN14268.1|  138|Drosophila melanogaster CG1746-PC,
           isoform C protein.
          Length = 138

 Score = 91.5 bits (217), Expect = 8e-19
 Identities = 55/112 (49%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
 Frame = +1

Query: 79  SPCSRTAIFSNTALGATPLA-AVPTHTQIVPV---AP-AQLSAVRTFQTTSVTKDIDSAA 243
           +P +R+A  +N+     PL+ A+ + +Q +      P A L  +R+FQT+ VT+DIDSAA
Sbjct: 10  APVARSAFLANSKQYLRPLSSAIISQSQTLAAQNTTPVALLPQIRSFQTSPVTRDIDSAA 69

Query: 244 KFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 399
           KF                    FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 70  KFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 121


>AE014297-4722|AAF57131.1|  138|Drosophila melanogaster CG1746-PB,
           isoform B protein.
          Length = 138

 Score = 91.5 bits (217), Expect = 8e-19
 Identities = 55/112 (49%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
 Frame = +1

Query: 79  SPCSRTAIFSNTALGATPLA-AVPTHTQIVPV---AP-AQLSAVRTFQTTSVTKDIDSAA 243
           +P +R+A  +N+     PL+ A+ + +Q +      P A L  +R+FQT+ VT+DIDSAA
Sbjct: 10  APVARSAFLANSKQYLRPLSSAIISQSQTLAAQNTTPVALLPQIRSFQTSPVTRDIDSAA 69

Query: 244 KFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 399
           KF                    FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 70  KFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 121


>AE014297-4721|AAN14267.1|  138|Drosophila melanogaster CG1746-PA,
           isoform A protein.
          Length = 138

 Score = 91.5 bits (217), Expect = 8e-19
 Identities = 55/112 (49%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
 Frame = +1

Query: 79  SPCSRTAIFSNTALGATPLA-AVPTHTQIVPV---AP-AQLSAVRTFQTTSVTKDIDSAA 243
           +P +R+A  +N+     PL+ A+ + +Q +      P A L  +R+FQT+ VT+DIDSAA
Sbjct: 10  APVARSAFLANSKQYLRPLSSAIISQSQTLAAQNTTPVALLPQIRSFQTSPVTRDIDSAA 69

Query: 244 KFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 399
           KF                    FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 70  KFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 121


>BT001710-1|AAN71465.1|  106|Drosophila melanogaster RE67675p
           protein.
          Length = 106

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 147 RHCCEWGRTKSCVAEDSSPAAGRSILRIQHFCVLRGATTDNKDTE 13
           RHC E+ + +   A+      GR++LRI    + R   TDN+D E
Sbjct: 37  RHCGEYTQYEQLFAQHD--ITGRALLRITDSSLQRMGVTDNRDRE 79


>AE013599-1945|AAM68548.1|  106|Drosophila melanogaster CG30476-PA
           protein.
          Length = 106

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 147 RHCCEWGRTKSCVAEDSSPAAGRSILRIQHFCVLRGATTDNKDTE 13
           RHC E+ + +   A+      GR++LRI    + R   TDN+D E
Sbjct: 37  RHCGEYTQYEQLFAQHD--ITGRALLRITDSSLQRMGVTDNRDRE 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,556,821
Number of Sequences: 53049
Number of extensions: 533613
Number of successful extensions: 1695
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1689
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)