Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F13
(473 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD2988... 46 3e-05
AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA... 46 3e-05
AF044287-1|AAC01743.1| 810|Drosophila melanogaster delta adapti... 29 3.2
U31351-1|AAB97618.1| 810|Drosophila melanogaster protein ( Dros... 27 9.8
BT014920-1|AAT47771.1| 124|Drosophila melanogaster LD08762p pro... 27 9.8
BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p pro... 27 9.8
AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3 delta-a... 27 9.8
AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-P... 27 9.8
AE014298-34|AAF45505.1| 124|Drosophila melanogaster CG13373-PA ... 27 9.8
>AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD29885
protein.
Length = 306
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +1
Query: 148 FLYRSYIAQGNHRIVLQELKTADPI-LQPLKSLVDYLSPGANKPAIVADIDARVAKGTEL 324
++Y SY+A + RIV ++K + LQ L+ + + + ++ + +VA G E
Sbjct: 47 YMYLSYLAIDSGRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEED 105
Query: 325 SNEVFHVVAATIYYYEDNYEAALTIFHDIELVELRAYSIQ 444
++H+ A +Y ++ +E AL I H +E A S+Q
Sbjct: 106 ETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQ 145
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +3
Query: 9 MARQQQDVDE---LFDVRNAFYVGNY 77
M+RQQ + D LFD RN +Y+GN+
Sbjct: 1 MSRQQNEEDTNSVLFDARNEYYIGNF 26
>AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA
protein.
Length = 306
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +1
Query: 148 FLYRSYIAQGNHRIVLQELKTADPI-LQPLKSLVDYLSPGANKPAIVADIDARVAKGTEL 324
++Y SY+A + RIV ++K + LQ L+ + + + ++ + +VA G E
Sbjct: 47 YMYLSYLAIDSGRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEED 105
Query: 325 SNEVFHVVAATIYYYEDNYEAALTIFHDIELVELRAYSIQ 444
++H+ A +Y ++ +E AL I H +E A S+Q
Sbjct: 106 ETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQ 145
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +3
Query: 9 MARQQQDVDE---LFDVRNAFYVGNY 77
M+RQQ + D LFD RN +Y+GN+
Sbjct: 1 MSRQQNEEDTNSVLFDARNEYYIGNF 26
>AF044287-1|AAC01743.1| 810|Drosophila melanogaster delta adaptin
subunit of AP-3 protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 316 TELSNEVFHVVAATIYYYEDNYEAALTIFHDIELVELRAYS 438
TEL +V + A + Y Y N+E LT+ +EL++L A S
Sbjct: 329 TELLYKVIEICAQSSYLYVTNFEWYLTVV--VELIQLEAGS 367
>U31351-1|AAB97618.1| 810|Drosophila melanogaster protein (
Drosophila melanogastergarnet mRNA, complete cds. ).
Length = 810
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 319 ELSNEVFHVVAATIYYYEDNYEAALTIFHDIELVELRAYS 438
EL +V + A + Y Y N+E LT+ +EL++L A S
Sbjct: 330 ELLYKVIEICAQSSYLYVTNFEWYLTVL--VELIQLEAGS 367
>BT014920-1|AAT47771.1| 124|Drosophila melanogaster LD08762p
protein.
Length = 124
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 94 EAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKT--ADPILQPLKS 240
+ Q N PLV Q + L Y G+ IVL+ L+T ++P L+ +KS
Sbjct: 11 QGQGQNALKPLVQGQEEPALCEQYYLLGDGSIVLRNLRTDLSNPRLERVKS 61
>BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p
protein.
Length = 1034
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 319 ELSNEVFHVVAATIYYYEDNYEAALTIFHDIELVELRAYS 438
EL +V + A + Y Y N+E LT+ +EL++L A S
Sbjct: 396 ELLYKVIEICAQSSYLYVTNFEWYLTVL--VELIQLEAGS 433
>AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3
delta-adaptin subunit protein.
Length = 1034
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 319 ELSNEVFHVVAATIYYYEDNYEAALTIFHDIELVELRAYS 438
EL +V + A + Y Y N+E LT+ +EL++L A S
Sbjct: 396 ELLYKVIEICAQSSYLYVTNFEWYLTVL--VELIQLEAGS 433
>AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-PB
protein.
Length = 1034
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 319 ELSNEVFHVVAATIYYYEDNYEAALTIFHDIELVELRAYS 438
EL +V + A + Y Y N+E LT+ +EL++L A S
Sbjct: 396 ELLYKVIEICAQSSYLYVTNFEWYLTVL--VELIQLEAGS 433
>AE014298-34|AAF45505.1| 124|Drosophila melanogaster CG13373-PA
protein.
Length = 124
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 94 EAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKT--ADPILQPLKS 240
+ Q N PLV Q + L Y G+ IVL+ L+T ++P L+ +KS
Sbjct: 11 QGQGQNALKPLVQGQEEPALCEQYYLLGDGSIVLRNLRTDLSNPRLERVKS 61
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,610,170
Number of Sequences: 53049
Number of extensions: 413720
Number of successful extensions: 1410
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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