Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F13
(473 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93382-3|CAB07613.1| 292|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical pr... 29 2.3
L15314-6|AAF99987.1| 406|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z34802-1|CAA84336.1| 531|Caenorhabditis elegans Hypothetical pr... 28 3.9
U58761-5|ABC71835.1| 148|Caenorhabditis elegans Hypothetical pr... 27 5.2
U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical pr... 27 5.2
AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical ... 27 5.2
AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical ... 27 5.2
AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical ... 27 5.2
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 27 6.9
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 27 9.1
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 27 9.1
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 27 9.1
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 27 9.1
AC084152-9|AAK39313.1| 296|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z93382-3|CAB07613.1| 292|Caenorhabditis elegans Hypothetical
protein F45G2.4 protein.
Length = 292
Score = 56.0 bits (129), Expect = 1e-08
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = +1
Query: 58 HFMLEITQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQEL--KTADPILQP 231
+F L Q I EA + + + ++DV+LYRSYIAQG I L+E+ T L
Sbjct: 11 YFFLGSYQSCIGEALKFSSKNEEEKQEKDVYLYRSYIAQGQAFIPLKEIPAATKSADLAA 70
Query: 232 LKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYEAALTIFHDI 411
++ ++ + A K I+A++ VA + +E+ V+AATI D + A
Sbjct: 71 VRRYAEFRNNPAAKKKILAEVQEEVA-SRNIKSEIAAVLAATILNEADLSQDAFRAVSRF 129
Query: 412 ELVELRAYSI 441
E +E RA +
Sbjct: 130 EGLEARASKV 139
>Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical
protein C27B7.6 protein.
Length = 465
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 190 VLQELKTADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEV 336
+L+ LKT IL+PL L++ ++P + DI ++ + +NEV
Sbjct: 36 ILEVLKTIKEILEPLPCLIEIIAP----VVVFGDIHGQLGDLLQFTNEV 80
>L15314-6|AAF99987.1| 406|Caenorhabditis elegans Hypothetical
protein K06H7.2 protein.
Length = 406
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 411 NIVENCQSCFIIIFIVINSGSNYMKYLIR*LCTFCNP 301
N + NC S + +G Y KY+ TFCNP
Sbjct: 367 NFINNCVSIHVTGLAKKKNGMPYTKYVSPKSYTFCNP 403
>Z34802-1|CAA84336.1| 531|Caenorhabditis elegans Hypothetical
protein M88.1 protein.
Length = 531
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 384 FIIIFIVINSGSNYMKYLIR*LCTFC 307
FI+IFIV G +M+ +IR C FC
Sbjct: 498 FIVIFIVFYIGYRFMRAVIR--CCFC 521
>U58761-5|ABC71835.1| 148|Caenorhabditis elegans Hypothetical
protein C01F1.3b protein.
Length = 148
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/76 (23%), Positives = 43/76 (56%)
Frame = +1
Query: 31 LMNFSMLEMHFMLEITQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKT 210
L+N + ++ +++I ++ ++E +NP+S V +R L + +GN + ++L++
Sbjct: 71 LVNPEPISLYEVVKIYKEIVDET--VNPTSIGVETERAQHLLAT---KGNCALDTEKLQS 125
Query: 211 ADPILQPLKSLVDYLS 258
P+L +SL+ + S
Sbjct: 126 LAPVLSAKQSLIKHFS 141
>U58761-4|AAB00715.1| 631|Caenorhabditis elegans Hypothetical
protein C01F1.3a protein.
Length = 631
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/76 (23%), Positives = 43/76 (56%)
Frame = +1
Query: 31 LMNFSMLEMHFMLEITQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKT 210
L+N + ++ +++I ++ ++E +NP+S V +R L + +GN + ++L++
Sbjct: 554 LVNPEPISLYEVVKIYKEIVDET--VNPTSIGVETERAQHLLAT---KGNCALDTEKLQS 608
Query: 211 ADPILQPLKSLVDYLS 258
P+L +SL+ + S
Sbjct: 609 LAPVLSAKQSLIKHFS 624
>AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.10 protein.
Length = 250
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 470 PDGSWPTGNCIEYALSSTNSISWKIVKAA 384
P+ ++P NC LS NS +W+ + AA
Sbjct: 117 PNVAYPRLNCASITLSQCNSPAWRTIIAA 145
>AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.9 protein.
Length = 250
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 470 PDGSWPTGNCIEYALSSTNSISWKIVKAA 384
P+ ++P NC LS NS +W+ + AA
Sbjct: 117 PNVAYPRLNCASITLSQCNSPAWRTIIAA 145
>AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical
protein T05B4.8 protein.
Length = 312
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 470 PDGSWPTGNCIEYALSSTNSISWKIVKAA 384
P+ ++P NC LS NS +W+ + AA
Sbjct: 179 PNVAYPRLNCASITLSQCNSPAWRTIIAA 207
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 319 ELSNEVFHVVAATIYYYEDNYEAAL 393
E +NE+F ++A+ I Y DN+ A++
Sbjct: 118 EDANELFRLIASCIIYSNDNWRASI 142
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 319 ELSNEVFHVVAATIYYYEDNYEAAL 393
E +NE+F ++A+ I Y DN+ A++
Sbjct: 118 EDANELFRLIASCIIYSNDNWRASI 142
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 12 ARQQQDVDELFDVRNAFYVGNYPTS 86
A Q +LF++RN Y+ YPTS
Sbjct: 354 AFQNSAFSQLFNIRNNRYLSEYPTS 378
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 12 ARQQQDVDELFDVRNAFYVGNYPTS 86
A Q +LF++RN Y+ YPTS
Sbjct: 358 AFQNSAFSQLFNIRNNRYLSEYPTS 382
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 12 ARQQQDVDELFDVRNAFYVGNYPTS 86
A Q +LF++RN Y+ YPTS
Sbjct: 354 AFQNSAFSQLFNIRNNRYLSEYPTS 378
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 12 ARQQQDVDELFDVRNAFYVGNYPTS 86
A Q +LF++RN Y+ YPTS
Sbjct: 358 AFQNSAFSQLFNIRNNRYLSEYPTS 382
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 12 ARQQQDVDELFDVRNAFYVGNYPTS 86
A Q +LF++RN Y+ YPTS
Sbjct: 358 AFQNSAFSQLFNIRNNRYLSEYPTS 382
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 12 ARQQQDVDELFDVRNAFYVGNYPTS 86
A Q +LF++RN Y+ YPTS
Sbjct: 354 AFQNSAFSQLFNIRNNRYLSEYPTS 378
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 12 ARQQQDVDELFDVRNAFYVGNYPTS 86
A Q +LF++RN Y+ YPTS
Sbjct: 358 AFQNSAFSQLFNIRNNRYLSEYPTS 382
>AC084152-9|AAK39313.1| 296|Caenorhabditis elegans Hypothetical
protein Y102A11A.1 protein.
Length = 296
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 379 YEAALTIFHDIELVELRAYSIQLPVGHE 462
Y A+ I ++ L Y+IQLP GH+
Sbjct: 238 YPASSAIMQPSGVIHLNLYTIQLPNGHQ 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,684,288
Number of Sequences: 27780
Number of extensions: 217184
Number of successful extensions: 579
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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