Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0005_F11
(575 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 279 3e-74
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 277 1e-73
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 244 2e-63
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 191 1e-47
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 186 2e-46
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 184 1e-45
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 163 4e-39
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 148 8e-35
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 129 5e-29
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 124 2e-27
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 124 2e-27
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 122 6e-27
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 121 1e-26
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 116 5e-25
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 111 9e-24
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 109 5e-23
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 109 6e-23
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 108 8e-23
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 104 2e-21
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 5e-20
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 93 6e-18
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 89 7e-17
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 88 1e-16
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 87 4e-16
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 85 1e-15
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 79 6e-14
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 77 2e-13
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 75 1e-12
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 75 1e-12
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 73 4e-12
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 72 1e-11
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 71 3e-11
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 68 1e-10
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 68 2e-10
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 66 7e-10
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 64 2e-09
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 64 3e-09
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 61 2e-08
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 61 2e-08
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 60 3e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 4e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 58 2e-07
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 56 6e-07
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 56 8e-07
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 1e-06
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 54 2e-06
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 54 2e-06
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 54 2e-06
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 53 6e-06
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 51 2e-05
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 48 1e-04
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.001
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.073
UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protei... 34 2.8
UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Re... 34 2.8
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 33 4.8
UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole... 33 6.4
UniRef50_Q6MRS9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_UPI00005874CE Cluster: PREDICTED: similar to OTTHUMP000... 32 8.4
UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6; ... 32 8.4
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 279 bits (684), Expect = 3e-74
Identities = 130/166 (78%), Positives = 148/166 (89%)
Frame = +2
Query: 77 QATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 256
+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 257 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 436
+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPA 125
Query: 437 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASE
Sbjct: 126 QNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASE 171
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 277 bits (680), Expect = 1e-73
Identities = 129/166 (77%), Positives = 148/166 (89%)
Frame = +2
Query: 77 QATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 256
+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTMMRKAI
Sbjct: 6 RATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAI 65
Query: 257 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 436
+ HLE NPALE+LLPHI+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP V +PA
Sbjct: 66 RGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPA 125
Query: 437 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDKVGASE
Sbjct: 126 QNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASE 171
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 244 bits (596), Expect = 2e-63
Identities = 109/166 (65%), Positives = 140/166 (84%)
Frame = +2
Query: 77 QATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 256
+A WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT +RKA+
Sbjct: 6 KAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTTIRKAL 65
Query: 257 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 436
+ HLE NP LEK+LPH+KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+ V +PA
Sbjct: 66 RGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVDVFVPA 125
Query: 437 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+KVGASE
Sbjct: 126 SNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGASE 171
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 191 bits (465), Expect = 1e-47
Identities = 92/168 (54%), Positives = 124/168 (73%), Gaps = 2/168 (1%)
Frame = +2
Query: 77 QATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 256
+A K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 6 KAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 65
Query: 257 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 430
+ H E N A+ LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+
Sbjct: 66 RIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 125
Query: 431 PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SE
Sbjct: 126 QPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSE 173
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 186 bits (454), Expect = 2e-46
Identities = 91/168 (54%), Positives = 123/168 (73%), Gaps = 2/168 (1%)
Frame = +2
Query: 77 QATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 256
+A K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 257 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 430
+ H + N A LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 431 PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SE
Sbjct: 127 QPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSE 174
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 184 bits (448), Expect = 1e-45
Identities = 88/162 (54%), Positives = 118/162 (72%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG +MGKNT++RKAIK+
Sbjct: 17 KEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTLIRKAIKNQA 76
Query: 269 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 448
ET P LE+LLPHIKGNVGF+FT+GDL ++ KL E K +PA+ G IAP V++PA +TG
Sbjct: 77 ETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDVIVPAGDTG 136
Query: 449 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
L P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG S+
Sbjct: 137 LDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQ 178
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 163 bits (395), Expect = 4e-39
Identities = 82/162 (50%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT +R A+K +L
Sbjct: 10 KQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNL 69
Query: 269 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPLSVVIPAHNT 445
+ P +EKLLP +K N+GFVF + DL ++R+ +L+NK + PAR G IAP+ V IP T
Sbjct: 70 QAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPT 129
Query: 446 GLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 571
G+ P TSF ++L I TKI KG IEI VH++K G+KV AS
Sbjct: 130 GMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTAS 171
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 148 bits (359), Expect = 8e-35
Identities = 74/168 (44%), Positives = 106/168 (63%)
Frame = +2
Query: 71 GGQATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 250
G + K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK
Sbjct: 3 GAGSKRKKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRK 62
Query: 251 AIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 430
I+D ++ P L+ L ++K N +F + ++ +V+ + +V APA+ G AP V+I
Sbjct: 63 VIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVII 122
Query: 431 PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
PA TG+ P +TSF Q L I TKI++G I+I+N+VHI+K G KVGASE
Sbjct: 123 PAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASE 170
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 129 bits (311), Expect = 5e-29
Identities = 73/180 (40%), Positives = 104/180 (57%), Gaps = 18/180 (10%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR-ISLRGHSIVLMGKNTMMRKAIKDH 265
K F KI +LL +Y + IVG NVGS+Q+Q IR I + ++++++GKNT+ +K +
Sbjct: 10 KPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNTLFKKVLATR 69
Query: 266 LETNPA-----------------LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPA 394
++ P L+ L + G VGF+FT + D++ + ENKV+ PA
Sbjct: 70 VQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPA 129
Query: 395 RPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
R GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I D +LK G KVG S+
Sbjct: 130 RVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQ 189
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 124 bits (298), Expect = 2e-27
Identities = 72/179 (40%), Positives = 106/179 (59%), Gaps = 17/179 (9%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 269 -ETN----------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPAR 397
E N P LE L+P ++GNV +F ++ +V + E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 398 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
G IAP V + TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG SE
Sbjct: 123 AGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSE 181
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 124 bits (298), Expect = 2e-27
Identities = 70/158 (44%), Positives = 98/158 (62%)
Frame = +2
Query: 98 YFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETN 277
Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I + L+ +
Sbjct: 16 YVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI-NQLDDD 74
Query: 278 PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 457
L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI T GP
Sbjct: 75 K-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGP 133
Query: 458 EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 571
++ F+ AL I TKI+KG IEI+N V+++K GD V S
Sbjct: 134 DQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPS 171
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 122 bits (294), Expect = 6e-27
Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 9/170 (5%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 269 ETNPA--LEKLLPH-------IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 421
E A +KLL + + GN +FT ++ + L +++VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCD 127
Query: 422 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 571
V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+V S
Sbjct: 128 VIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNS 177
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 121 bits (292), Expect = 1e-26
Identities = 66/180 (36%), Positives = 111/180 (61%), Gaps = 18/180 (10%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDH 265
K+ +F ++ + D+Y + +V DN+ ++Q+ R LR + S++LMG+NT+++ A++
Sbjct: 10 KNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENTLIKAALQKR 69
Query: 266 L------ETN-----------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPA 394
+ E++ P +E L+ +KGN+G +FT DL D++D + + +APA
Sbjct: 70 ISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPA 129
Query: 395 RPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
R G++A V I A TGL P++T+FFQ L+IPTKI+K IEI D I+ G+KVG++E
Sbjct: 130 RVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNE 189
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 116 bits (278), Expect = 5e-25
Identities = 67/178 (37%), Positives = 100/178 (56%), Gaps = 16/178 (8%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK--- 259
K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA++
Sbjct: 12 KDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKAVQLKS 71
Query: 260 DHLETN-------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARP 400
L T+ P L L+PH+K + +VF + ++ K+ V APAR
Sbjct: 72 ADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARV 131
Query: 401 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
G +A V+IP TG+ P + +FF ALSI TKI KG IEI +V + G K+G SE
Sbjct: 132 GTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIGNSE 189
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 111 bits (268), Expect = 9e-24
Identities = 61/153 (39%), Positives = 96/153 (62%)
Frame = +2
Query: 116 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKL 295
+L + Y + +V +NV S Q++ I+ G++ +LMGKN+ +R+AI D P L +
Sbjct: 43 KLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAIRRAIADL--GKPELSGV 100
Query: 296 LPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFF 475
+KG+V FVF +G+ D++ + EN +A A+ G +A V + + TG+ P+KTS+F
Sbjct: 101 YDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYF 160
Query: 476 QALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
QAL I TKI+KG +EII+ +L GDKVG S+
Sbjct: 161 QALGIATKITKGKVEIISPYKVLSEGDKVGPSQ 193
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 109 bits (262), Expect = 5e-23
Identities = 59/163 (36%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDH 265
K +Y K+ L +Y K +V + NV + Q+ IR L H VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
E P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRT 130
Query: 446 GLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
+ P AL+I KI KGTIEI + ++ G KVGASE
Sbjct: 131 SMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGASE 173
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 109 bits (261), Expect = 6e-23
Identities = 54/162 (33%), Positives = 93/162 (57%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
KS F K L ++ + +V +N+ S+Q+++ + L SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 269 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 448
+ + ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTN 128
Query: 449 LGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
+ P+ FQ+L+IPTKI KG IEII + +L+ G K+ +E
Sbjct: 129 ISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEAE 170
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 108 bits (260), Expect = 8e-23
Identities = 58/163 (35%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Frame = +2
Query: 80 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAI 256
A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT+MR A+
Sbjct: 18 AEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIAL 77
Query: 257 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 436
++ L+ P LE LL +I+G V F+FT D + L E+K APA+PG IAP +V+P
Sbjct: 78 EEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPE 137
Query: 437 HNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
T P S Q +P +I G + I D ++K G+++
Sbjct: 138 GPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEI 180
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 104 bits (249), Expect = 2e-21
Identities = 65/149 (43%), Positives = 75/149 (50%)
Frame = -3
Query: 516 IVPFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 337
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 336 RVKTKPTFPLM*GSSFSRAGFVSRWSLMAFLIMVFLPMSTML*PRNEXXXXXXXCEPTLS 157
VKTKPT PL G++FS++G + LMA L MVFLP+ T P N E TLS
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLS 120
Query: 156 APTMKHFGYSSNSWMILTK*LDFQVACPP 70
PT YSS + L K F PP
Sbjct: 121 TPTTNKDLYSSKYSLNLAKYSAFFSRMPP 149
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect(2) = 5e-20
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 245 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 382
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 50.0 bits (114), Expect(2) = 5e-20
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 479 ALSIPTKISKGTIEIINDVHILKPGDKV 562
ALSIP KISKGTIEIINDV ILK GDK+
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI 765
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 92.7 bits (220), Expect = 6e-18
Identities = 54/151 (35%), Positives = 77/151 (50%)
Frame = -2
Query: 574 FRSSHLITRLQDMDIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRT 395
FRS+ +T + D+++ DNFN T NL + +SLEERSL V N D W N + +
Sbjct: 156 FRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSS 215
Query: 394 SRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHN 215
+ V I + GED+ N++LD R+Q F W D HGV H+ N
Sbjct: 216 GWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDSSSDHGVLTHQDN 275
Query: 214 AVTTQ*NTDLLHLLRAYIVRTHYETFWVFVQ 122
+ +Q +D +HLL +IV T+ E VF Q
Sbjct: 276 SSASQVLSDFVHLLGRHIVNTNNEDRLVFFQ 306
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 89.0 bits (211), Expect = 7e-17
Identities = 47/156 (30%), Positives = 83/156 (53%)
Frame = +2
Query: 107 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 286
K I LL+ Y IV +N+ S+Q+ IR LRG S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 287 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 466
+ ++ N+G +FT +L + + + + + G IA +++I L P +T
Sbjct: 71 MSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQT 130
Query: 467 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
FFQAL IPT+ISK +IEII D+ ++ + S+
Sbjct: 131 PFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQ 166
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 88.2 bits (209), Expect = 1e-16
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Frame = +2
Query: 80 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVL-MGKNTMMRKAI 256
A WK ++ +L+ YP +V ++ + + Q+R +R + +L + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 257 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 430
K + P LEKL+ +I G + T + + L +N+ APA+PGA+ P VV+
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 431 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
PA T L P QAL IP +I KG + I D +LK G+ +
Sbjct: 125 PAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVI 169
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 86.6 bits (205), Expect = 4e-16
Identities = 43/160 (26%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 265
WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +A++
Sbjct: 15 WKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRALE-- 72
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
E L+ L +++G VG V T + + +L +K AP G +AP +V+P +T
Sbjct: 73 -EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDT 131
Query: 446 GLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
G+ P Q + +I +G+I++++D + + G+ V
Sbjct: 132 GIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETV 171
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 84.6 bits (200), Expect = 1e-15
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 265
WK ++ +L+ ++ I + + + Q R LRGH +V + +N + A++
Sbjct: 21 WKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALRRI 80
Query: 266 L--ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 439
N +EK ++ G GF+FT + D+ +++N V+ A+PG + +++PA
Sbjct: 81 YGDSVNAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAG 137
Query: 440 NTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
NTG+ P S F L IPT+I G I + D + KPGD V
Sbjct: 138 NTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTV 179
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 79.4 bits (187), Expect = 6e-14
Identities = 45/162 (27%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Frame = +2
Query: 80 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 259
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 260 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 439
+ +E L +++G VFT+ + + L ++K +APA+ G+IAP +V+PA
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAG 122
Query: 440 NTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
+T P Q + IP KI KG+I + +D I+ G+++
Sbjct: 123 DTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEI 164
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 77.4 bits (182), Expect = 2e-13
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Frame = +2
Query: 116 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKL 295
+LL +YP F+ + S+ + + R LR + ++ + K T+ + A PA ++
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EI 86
Query: 296 LPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSF 472
++G VGF FT + +V + EN V+ A+PG AP +V+PA T P S
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISK 146
Query: 473 FQALSIPTKISKGTIEIINDVHILKPGDKV 562
F L IPT++ +G I I D + K G ++
Sbjct: 147 FGKLKIPTRVQEGKIWIAKDTVVAKAGQEI 176
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 74.9 bits (176), Expect = 1e-12
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Frame = +2
Query: 80 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 259
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 260 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLEN-KVQAPARPGAIAPLSVVIPA 436
+ +EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA
Sbjct: 74 N---AGIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPA 129
Query: 437 HNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 568
+TG+ GP S F L + TK+ G + ++ D + KPGD + A
Sbjct: 130 GDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPA 174
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 74.9 bits (176), Expect = 1e-12
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Frame = +2
Query: 80 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 259
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 260 DHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 433
+ E NP KL+ ++ V T + + L E+K AP + GAIAP + +
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVK 130
Query: 434 AHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
+ +TG+ P S +A+ IP I KG I I D + K GD +
Sbjct: 131 SGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVI 174
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 73.3 bits (172), Expect = 4e-12
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Frame = +2
Query: 146 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 325
+V +++ + Q+ +R LR K+ + RKA+ P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 326 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 499
+FT + L +NK AR G IA + V +PA NTG+ GP T F +A IPTK
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTK 133
Query: 500 ISKGTIEIINDVHILKPGDKVG 565
I +GTI I+ D +K G+ +G
Sbjct: 134 IDQGTIWILKDTTPVKKGEPIG 155
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 71.7 bits (168), Expect = 1e-11
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K+ + ++ +L +Y I+ + V S Q+ +R +L+ K+ + +KA+++
Sbjct: 12 KTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN-- 69
Query: 269 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 448
P ++ ++ KG V +FT + L +NK+ AR G IA + VV+PA NTG
Sbjct: 70 SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTG 129
Query: 449 L--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
+ GP T F +A IPTKI +GTI I D + G+ +
Sbjct: 130 IAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAI 168
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 70.5 bits (165), Expect = 3e-11
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDH 265
K+ ++ L +Y + + + ++ R LR S++ + KNT+ A+K+
Sbjct: 17 KAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN- 75
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
T +E + H++G +FT + ++ L + K+ AR G IA +V+PA NT
Sbjct: 76 --TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNT 133
Query: 446 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
G+ P S F L IPT++ +G+I I D + KPGD +
Sbjct: 134 GIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVI 173
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 68.1 bits (159), Expect = 1e-10
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 265
WK + +I + ++E+ +V + + Q+QQIR +LRG + V M +NT++ A+
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALN-- 68
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
E ++ L H +G +FT + + L + K + A+PG AP +VIP T
Sbjct: 69 -ELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 446 GLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
P Q + IP I G ++I ++K G+ +
Sbjct: 128 SFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVI 167
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 67.7 bits (158), Expect = 2e-10
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 265
WK + L YP I + Q+Q++R L + + KN ++ +A+++
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
E+LL G +FT + ++ L + K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 446 GLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
GL P S F L IPT+I +I I D + KPGD +
Sbjct: 132 GLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTI 171
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 65.7 bits (153), Expect = 7e-10
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K +I + D Y +++ + N+ S QQ+R S++G++ + MGKN +MR A+
Sbjct: 33 KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTE 92
Query: 269 ETNPALE--KLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 442
E + + +L +KG G +FT VR L AR G +A ++VIP
Sbjct: 93 EESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--Q 150
Query: 443 TGLGPEKTSF-----FQALSIPTKISKGTIEIINDVHILKPGDKVGASE 574
L +K SF + L +PT + I ++ D + K GD + +++
Sbjct: 151 GPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCKEGDVLTSAQ 199
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 64.1 bits (149), Expect = 2e-09
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 265
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSF--- 67
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T
Sbjct: 68 --GGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 446 GLGP-EKTSFFQALSIPTKISKGTIEI 523
L P Q L IP+ I G + +
Sbjct: 126 SLRPGPVVGELQNLGIPSGIDGGKVVV 152
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 63.7 bits (148), Expect = 3e-09
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +2
Query: 230 KNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 409
KN ++RKA + P +++ + G+ F+FT + + K+ + + APA+PG +
Sbjct: 68 KNNLVRKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDV 125
Query: 410 APLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
A +V+PA +TGL P S F L I T + GTI I D + KPGD +
Sbjct: 126 AQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVI 177
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 61.3 bits (142), Expect = 2e-08
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 265
WK + KI+ + + IV V + +Q++R +L G + M +NT+ A D
Sbjct: 16 WKKDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DS 74
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
L ++L ++ G + V+T + + L K + A+ G IAP +VIP T
Sbjct: 75 LPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 446 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 568
P FQ + IP I G + I + ++K G+K+ A
Sbjct: 135 SFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISA 176
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 60.9 bits (141), Expect = 2e-08
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K +I + L++Y + N+ + +QQIR G S + +G N +M AI
Sbjct: 23 KDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLGNNKVMMIAIGRDE 82
Query: 269 ET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 442
E+ L KL P + G G +FT +V++ AR G A S+V+
Sbjct: 83 ESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTGQTATESLVLKGGP 142
Query: 443 TGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 568
P L +P K+ +G I ++ D + +PGD + A
Sbjct: 143 LPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPGDTLSA 185
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 60.5 bits (140), Expect = 3e-08
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 259
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 260 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 439
E P L KL + G VG +FT +V + AR G +A +V +PA
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAG 141
Query: 440 N-TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPG 553
++L +PTK+ KG + + +D + + G
Sbjct: 142 PLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.1 bits (139), Expect = 4e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 212 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 391
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 392 ARPGAIAPLSVVIPAHNTGL 451
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +2
Query: 167 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 340
G + + R +V + K + + + H E NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 341 DLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 451
DL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +2
Query: 275 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 451
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 57.6 bits (133), Expect = 2e-07
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Frame = +2
Query: 146 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 325
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 326 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 499
+ T ++ + +E+KV P + G IAP +VIP T + GP +T +AL + TK
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTK 142
Query: 500 ISKGTIEIINDVHILKPGDKV 562
++ G IEI+ D ++K G+ V
Sbjct: 143 VTSGKIEIVEDAVVVKEGEIV 163
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 56.0 bits (129), Expect = 6e-07
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 262
K ++ + +D Y FI N+ + +++ +R + + HS + GKN +M A+ +
Sbjct: 30 KQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGREP 88
Query: 263 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 442
E L ++ H++G VG +FT +V + K AR G A +V +
Sbjct: 89 SSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGP 148
Query: 443 TGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGD 556
P + L +PT + KG + +++D + K GD
Sbjct: 149 LEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 187
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 55.6 bits (128), Expect = 8e-07
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 265
WK ++++ + + G + + + Q++R LR S V + N + R+AI
Sbjct: 14 WKLREVDELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI--- 70
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
L+++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 446 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
P Q+ IP I G + I V + K GD +
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVI 170
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 54.8 bits (126), Expect = 1e-06
Identities = 35/160 (21%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 265
WK + I +L+ + +V + + + ++Q+IR L+ +++ + +NT+ +A+
Sbjct: 14 WKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQL 73
Query: 266 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 445
E+ P + + L + +FT + L + K +P + GAIAP +++ T
Sbjct: 74 GESIPEMTRYLDN---QTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 446 GLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
P Q+ IP I G + + + K G+ V
Sbjct: 131 SFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAV 170
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 54.0 bits (124), Expect = 2e-06
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KDH 265
K K+ Q LDEY + ++V N +Q++ +IR ++ + L G N + A+ K H
Sbjct: 17 KKQDVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTH 75
Query: 266 LET-NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 442
++ P L L ++KG +FT+ ++R++L + RPGA A +V I +
Sbjct: 76 KDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGP 135
Query: 443 TGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGD 556
P + L +P K+ +G + + D + D
Sbjct: 136 LPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 174
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 54.0 bits (124), Expect = 2e-06
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Frame = +2
Query: 71 GGQATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 250
G +K +I +++ P IV NV + QMQ+IR RG + + + KNT++ +
Sbjct: 6 GSPPEYKVRAVEEIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLER 65
Query: 251 AIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 430
A+ D L + KL ++ + + + + + + KV +P +P ++P+ VV+
Sbjct: 66 AL-DALGGD--YLKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVV 122
Query: 431 PAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
T + P + Q +P I KG + + ++K G+ V
Sbjct: 123 NEGPTPIPPGPLMAELQMAGLPVAIEKGKVVVKATTTVVKAGEVV 167
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K F I + + Y CF+ DN+ + ++ +R L I GK + +A+
Sbjct: 23 KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELNDCRI-FFGKTKLTARALGTTP 81
Query: 269 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 436
E A L+KL ++ G+VG +FT D +++D + AR G++A ++ IP+
Sbjct: 82 EDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 52.8 bits (121), Expect = 6e-06
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K+N ++ +D+Y FI N+ S + IR + +S GKN ++ A+
Sbjct: 23 KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQK 82
Query: 269 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP-AH 439
A L K +KG G +FT +V + E + AR G +A +VV+P
Sbjct: 83 SDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGP 142
Query: 440 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 556
+ + L +PTK+ KG I + + K G+
Sbjct: 143 ISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEGE 181
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 51.2 bits (117), Expect = 2e-05
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Frame = +2
Query: 86 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KD 262
WKS ++ L E ++ +N+ + +++R + + +G N ++R A+ +D
Sbjct: 22 WKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAATEATTTFFVGSNKVLRVALGRD 81
Query: 263 -HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI--- 430
E + L +KG+ G +FT DV V+ AR GA+A +V +
Sbjct: 82 AESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTGALARETVTVEAG 141
Query: 431 PAHN-TGLGPEKT--SFFQALSIPTKISKGTIEIINDVHILKPGDKV 562
P H +G E T + +PTK+++G IE+ + + K G +
Sbjct: 142 PVHGPSGALMEHTLEPTLRKNGMPTKLNRGVIELEANHTLCKEGQHI 188
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 48.4 bits (110), Expect = 1e-04
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 268
K+ F + Q LD + +I N+ + +++IR +G S + MGK +M KA+
Sbjct: 23 KAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKALGHTP 81
Query: 269 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP-ARPGAIAPLSVVIPA 436
E A + KL + G VG +FT +V E+ VQ AR GA+AP + VIPA
Sbjct: 82 EEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVIPA 139
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -3
Query: 474 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM* 301
++ +F R PVL G T A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 300 GSSFSRAGF 274
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 39.1 bits (87), Expect = 0.073
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 89 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 262
K+N K+ EYP +I+G ++ + ++++R +G S + GK ++ A+ +
Sbjct: 23 KANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKG-SKIFFGKLKVLALALGMTE 81
Query: 263 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 433
E + + + G+VG +FT +V D + + AR G+ A ++ +P
Sbjct: 82 EEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQRVDFARGGSKATETIELP 138
>UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protein;
n=1; Blastopirellula marina DSM 3645|Rep: Protein
disulfide-isomerase-like protein - Blastopirellula
marina DSM 3645
Length = 717
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 494 WGWKEPGRKKSSQDQGQCYERE*RQTMEQW-LQDEPGLGLCSPT 366
W W+ P ++Q Q +ER + +E W Q +P LG SP+
Sbjct: 422 WSWRLPDSASAAQKQALTHERRRQALLESWTAQPQPSLGGKSPS 465
>UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Rep:
AER172Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1268
Score = 33.9 bits (74), Expect = 2.8
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -2
Query: 535 DIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFIT 356
DI++NFN N D ++L +R L ++ + R++S+ + G+D +++
Sbjct: 268 DIVENFNKIYHNFENDKETLLKRLKLEENDKLLEYDKKRKYSDKANEEAGIDSIIEDSEP 327
Query: 355 HINKISTGEDKANISLDV 302
+ K ++L V
Sbjct: 328 DVKKSRNSISSLPVNLGV 345
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 33.1 bits (72), Expect = 4.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 116 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGH--SIVLMGKNTMMRKAIKDH 265
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQH 217
>UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7271,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 145
Score = 32.7 bits (71), Expect = 6.4
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +3
Query: 312 EMLALS-SPVEILLMCVINCWRTKSKPR 392
+ LAL+ +PV++LL CV+ CW T S+PR
Sbjct: 74 QALALALAPVQLLLACVLTCW-TGSRPR 100
>UniRef50_Q6MRS9 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma mycoides subsp. mycoides SC|Rep: Putative
uncharacterized protein - Mycoplasma mycoides subsp.
mycoides SC
Length = 746
Score = 32.7 bits (71), Expect = 6.4
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = -2
Query: 259 LDGFPHHGVFAHEHNAVTTQ*NTDLLHLLRAYIVRTHYETFWVFVQQLDDFNEVIGLPGS 80
L + ++ + + N++ NT + L + ++ T + +++ Q+D+F+E + P
Sbjct: 129 LKHYSYYKITQEDINSINKNFNTSFVDLTKTRLINTILDVYFIKSFQVDEFSETLDQPSI 188
Query: 79 LSSY 68
+S Y
Sbjct: 189 ISIY 192
>UniRef50_UPI00005874CE Cluster: PREDICTED: similar to
OTTHUMP00000029908; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to OTTHUMP00000029908
- Strongylocentrotus purpuratus
Length = 379
Score = 32.3 bits (70), Expect = 8.4
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 233 NTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 412
N M+K I+ H+E N ALE ++ +K +V + T + DVR ++ + + +
Sbjct: 307 NITMKKEIEGHIEENEALETIIQQLKEDVKSMST-DPISDVRKQMFPHLYKEVQKCTPDM 365
Query: 413 PLSVVIPAHN 442
+ + IP H+
Sbjct: 366 DVELDIPRHD 375
>UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1803
Score = 32.3 bits (70), Expect = 8.4
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -2
Query: 460 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 281
L+ KA + N R S + T+ +F+ + F TH +N S ++F+E
Sbjct: 100 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFPTHRTN-GLKRQISNFSAKENEKFYEC 157
Query: 280 WICFKMVLDGFPHHG 236
W + ++ FPHHG
Sbjct: 158 WERYMEAINAFPHHG 172
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,624,391
Number of Sequences: 1657284
Number of extensions: 13663806
Number of successful extensions: 40655
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 39171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40607
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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